RNA–Protein interactions for RNA: ENST00000317702.9

TUBB6-201, Transcript of tubulin beta 6 class V, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB6, Length 2,064 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB6-201ENST00000317702 UQCR11O14957 56 aa14.97□□□□□ -0.01
TUBB6-201ENST00000317702 RPL37P61927 97 aaKnown RBP14.97□□□□□ -0.01
TUBB6-201ENST00000317702 SPATA8Q6RVD6 105 aa14.96□□□□□ -0.02
TUBB6-201ENST00000317702 SEC61GP60059 68 aa14.92□□□□□ -0.02
TUBB6-201ENST00000317702 COX6B2Q6YFQ2 88 aa14.92□□□□□ -0.02
TUBB6-201ENST00000317702 MIR22HGQ0VDD5 57 aa14.9□□□□□ -0.02
TUBB6-201ENST00000317702 KTN1-AS1Q86SY8 53 aa14.82□□□□□ -0.04
TUBB6-201ENST00000317702 TPRXLQ17RH7 258 aa14.74□□□□□ -0.05
TUBB6-201ENST00000317702 J3QL48 77 aa14.57□□□□□ -0.08
TUBB6-201ENST00000317702 A0A1B0GU33 70 aa14.56□□□□□ -0.08
TUBB6-201ENST00000317702 LPAP08519 4548 aa14.55□□□□□ -0.08
TUBB6-201ENST00000317702 LRP2P98164 4655 aa14.53□□□□□ -0.08
TUBB6-201ENST00000317702 H0YAA0 97 aa14.53□□□□□ -0.08
TUBB6-201ENST00000317702 H1FX-AS1Q4G0G2 97 aa14.52□□□□□ -0.09
TUBB6-201ENST00000317702 HERC1Q15751 4861 aa14.49□□□□□ -0.09
TUBB6-201ENST00000317702 KRTAP3-3Q9BYR6 98 aa14.48□□□□□ -0.09
TUBB6-201ENST00000317702 S4R3F8 94 aa14.41□□□□□ -0.1
TUBB6-201ENST00000317702 RBM12B-AS1Q9P1G2 102 aa14.29□□□□□ -0.12
TUBB6-201ENST00000317702 KRTAP10-6P60371 365 aaPredicted RBP14.25□□□□□ -0.13
TUBB6-201ENST00000317702 ADM2Q7Z4H4 148 aa14.24□□□□□ -0.13
TUBB6-201ENST00000317702 PRAC1Q96KF2 57 aa14.22□□□□□ -0.13
TUBB6-201ENST00000317702 SEC61BP60468 96 aaKnown RBP14.19□□□□□ -0.14
TUBB6-201ENST00000317702 KRTAP3-2Q9BYR7 98 aa14.18□□□□□ -0.14
TUBB6-201ENST00000317702 KRTAP4-1Q9BYQ7 146 aa14.05□□□□□ -0.16
TUBB6-201ENST00000317702 KRTAP13-4Q3LI77 160 aa14.02□□□□□ -0.16
TUBB6-201ENST00000317702 K7ERS5 55 aa14.01□□□□□ -0.17
TUBB6-201ENST00000317702 MUC17Q685J3 4493 aa14.01□□□□□ -0.17
TUBB6-201ENST00000317702 P0C880 135 aa14□□□□□ -0.17
TUBB6-201ENST00000317702 HMCN2Q8NDA2 5059 aa13.98□□□□□ -0.17
TUBB6-201ENST00000317702 CSAG1Q6PB30 78 aa13.96□□□□□ -0.17
TUBB6-201ENST00000317702 A0A0D9SG42 100 aa13.86□□□□□ -0.19
TUBB6-201ENST00000317702 KRTAP19-2Q3LHN2 52 aa13.73□□□□□ -0.21
TUBB6-201ENST00000317702 LINC01554Q52M75 96 aa13.66□□□□□ -0.22
TUBB6-201ENST00000317702 UBR4Q5T4S7 5183 aa13.65□□□□□ -0.22
TUBB6-201ENST00000317702 M0QZ58 72 aa13.62□□□□□ -0.23
TUBB6-201ENST00000317702 ROMO1P60602 79 aa13.62□□□□□ -0.23
TUBB6-201ENST00000317702 KRTAP25-1Q3LHN0 102 aa13.59□□□□□ -0.23
TUBB6-201ENST00000317702 KRTAP12-2P59991 146 aa13.54□□□□□ -0.24
TUBB6-201ENST00000317702 KRTAP12-1P59990 96 aa13.49□□□□□ -0.25
TUBB6-201ENST00000317702 MUC2Q02817 5179 aa13.49□□□□□ -0.25
TUBB6-201ENST00000317702 SPINT4Q6UDR6 99 aa13.44□□□□□ -0.26
TUBB6-201ENST00000317702 CRIPTQ9P021 101 aa13.43□□□□□ -0.26
TUBB6-201ENST00000317702 RNF213Q63HN8 5207 aa13.38□□□□□ -0.27
TUBB6-201ENST00000317702 R4GN34 69 aa13.34□□□□□ -0.27
TUBB6-201ENST00000317702 FLGP20930 4061 aaPredicted RBP13.29□□□□□ -0.28
TUBB6-201ENST00000317702 LORP23490 312 aaPredicted RBP13.21□□□□□ -0.29
TUBB6-201ENST00000317702 LCE2CQ5TA81 110 aa13.2□□□□□ -0.3
TUBB6-201ENST00000317702 C10orf95Q9H7T3 257 aa13.05□□□□□ -0.32
TUBB6-201ENST00000317702 FAT4Q6V0I7 4981 aa12.94□□□□□ -0.34
TUBB6-201ENST00000317702 MT1HP80294 61 aa12.88□□□□□ -0.35
TUBB6-201ENST00000317702 M0R2T5 61 aa12.76□□□□□ -0.37
TUBB6-201ENST00000317702 CAMK2N1Q7Z7J9 78 aa12.61□□□□□ -0.39
TUBB6-201ENST00000317702 MT2AP02795 61 aa12.5□□□□□ -0.41
TUBB6-201ENST00000317702 KRTAP9-8Q9BYQ0 159 aa12.48□□□□□ -0.41
TUBB6-201ENST00000317702 MT1FP04733 61 aa12.46□□□□□ -0.41
TUBB6-201ENST00000317702 SPRR2GQ9BYE4 73 aa12.43□□□□□ -0.42
TUBB6-201ENST00000317702 KRTAP19-1Q8IUB9 90 aa12.41□□□□□ -0.42
TUBB6-201ENST00000317702 KRTAP10-10P60014 251 aa12.38□□□□□ -0.43
TUBB6-201ENST00000317702 LCE2AQ5TA79 106 aaPredicted RBP12.3□□□□□ -0.44
TUBB6-201ENST00000317702 KRTAP15-1Q3LI76 137 aa12.29□□□□□ -0.44
TUBB6-201ENST00000317702 PP632Q6XCG6 107 aa12.23□□□□□ -0.45
TUBB6-201ENST00000317702 PLAC4Q8WY50 150 aa12.15□□□□□ -0.46
TUBB6-201ENST00000317702 TNP1P09430 55 aa12.12□□□□□ -0.47
TUBB6-201ENST00000317702 KRTAP19-8Q3LI54 63 aa12.03□□□□□ -0.48
TUBB6-201ENST00000317702 KRTAP9-3Q9BYQ3 159 aa12□□□□□ -0.49
TUBB6-201ENST00000317702 KRTAP23-1A1A580 65 aa11.94□□□□□ -0.5
TUBB6-201ENST00000317702 MT1BP07438 61 aa11.9□□□□□ -0.51
TUBB6-201ENST00000317702 H3BS24 57 aa11.86□□□□□ -0.51
TUBB6-201ENST00000317702 NDUFAF8A1L188 74 aa11.79□□□□□ -0.52
TUBB6-201ENST00000317702 LCE2BO14633 110 aa11.63□□□□□ -0.55
TUBB6-201ENST00000317702 MT1XP80297 61 aa11.62□□□□□ -0.55
TUBB6-201ENST00000317702 KRTAP10-5P60370 271 aa11.61□□□□□ -0.55
TUBB6-201ENST00000317702 KRTAP9-2Q9BYQ4 174 aa11.56□□□□□ -0.56
TUBB6-201ENST00000317702 LCE3AQ5TA76 89 aa11.5□□□□□ -0.57
TUBB6-201ENST00000317702 LCE2DQ5TA82 110 aaPredicted RBP11.4□□□□□ -0.58
TUBB6-201ENST00000317702 FSIP2Q5CZC0 6907 aa11.39□□□□□ -0.59
TUBB6-201ENST00000317702 LUZP6Q538Z0 58 aa11.32□□□□□ -0.6
TUBB6-201ENST00000317702 PRO2289Q9P1D8 64 aa11.28□□□□□ -0.6
TUBB6-201ENST00000317702 KRTAP8-1Q8IUC2 63 aa11.25□□□□□ -0.61
TUBB6-201ENST00000317702 SPRR5A0A1B0GTR4 108 aa11.24□□□□□ -0.61
TUBB6-201ENST00000317702 KRTAP10-7P60409 375 aaPredicted RBP11.22□□□□□ -0.61
TUBB6-201ENST00000317702 KRTAP10-12P60413 245 aa11.2□□□□□ -0.62
TUBB6-201ENST00000317702 USH2AO75445 5202 aa11.18□□□□□ -0.62
TUBB6-201ENST00000317702 KRTAP12-3P60328 96 aa10.99□□□□□ -0.65
TUBB6-201ENST00000317702 CRCT1Q9UGL9 99 aa10.98□□□□□ -0.65
TUBB6-201ENST00000317702 SSPOA2VEC9 5147 aa10.97□□□□□ -0.65
TUBB6-201ENST00000317702 KRTAP9-6A0A140TA67 174 aa10.97□□□□□ -0.65
TUBB6-201ENST00000317702 KRTAP19-6Q3LI70 58 aa10.7□□□□□ -0.7
TUBB6-201ENST00000317702 KRTAP4-8A0A0G2JLE6 195 aa10.68□□□□□ -0.7
TUBB6-201ENST00000317702 KRTAP4-8Q9BYQ9 185 aa10.68□□□□□ -0.7
TUBB6-201ENST00000317702 KRTAP19-5Q3LI72 72 aa10.64□□□□□ -0.71
TUBB6-201ENST00000317702 FCGBPQ9Y6R7 5405 aaPredicted RBP10.63□□□□□ -0.71
TUBB6-201ENST00000317702 KMT2DO14686 5537 aa10.6□□□□□ -0.71
TUBB6-201ENST00000317702 A0A0A0MQY5 61 aa10.47□□□□□ -0.73
TUBB6-201ENST00000317702 KRTAP19-7Q3SYF9 63 aa10.37□□□□□ -0.75
TUBB6-201ENST00000317702 LCE3CQ5T5A8 94 aa10.33□□□□□ -0.76
TUBB6-201ENST00000317702 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.21□□□□□ -0.77
TUBB6-201ENST00000317702 MACF1Q9UPN3 7388 aaKnown RBP10.2□□□□□ -0.78
TUBB6-201ENST00000317702 MT1EP04732 61 aa10.13□□□□□ -0.79
TUBB6-201ENST00000317702 SYNE2Q8WXH0 6885 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms