RNA–Protein interactions for RNA: ENST00000315251.10

CHDH-201, Transcript of choline dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHDH, Length 7,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHDH-201ENST00000315251 HUWE1Q7Z6Z7 4374 aaKnown RBP6.26□□□□□ -1.41
CHDH-201ENST00000315251 KRTAP23-1A1A580 65 aa6.26□□□□□ -1.41
CHDH-201ENST00000315251 KRTAP10-4P60372 401 aaPredicted RBP6.14□□□□□ -1.43
CHDH-201ENST00000315251 ALMS1Q8TCU4 4167 aa6.07□□□□□ -1.44
CHDH-201ENST00000315251 AKAP9Q99996 3911 aa6.06□□□□□ -1.44
CHDH-201ENST00000315251 ZNF469Q96JG9 3925 aaPredicted RBP5.94□□□□□ -1.46
CHDH-201ENST00000315251 KRTAP10-7P60409 375 aaPredicted RBP5.93□□□□□ -1.46
CHDH-201ENST00000315251 SPRR2FQ96RM1 72 aa5.91□□□□□ -1.46
CHDH-201ENST00000315251 DNAH2Q9P225 4427 aa5.9□□□□□ -1.47
CHDH-201ENST00000315251 MT1HP80294 61 aa5.84□□□□□ -1.47
CHDH-201ENST00000315251 KRTAP19-5Q3LI72 72 aa5.82□□□□□ -1.48
CHDH-201ENST00000315251 KRTAP4-1Q9BYQ7 146 aa5.81□□□□□ -1.48
CHDH-201ENST00000315251 DNAH1Q9P2D7 4330 aa5.77□□□□□ -1.48
CHDH-201ENST00000315251 MT2AP02795 61 aa5.73□□□□□ -1.49
CHDH-201ENST00000315251 LCE3CQ5T5A8 94 aa5.73□□□□□ -1.49
CHDH-201ENST00000315251 DNAH9Q9NYC9 4486 aa5.68□□□□□ -1.5
CHDH-201ENST00000315251 SPRR2GQ9BYE4 73 aa5.68□□□□□ -1.5
CHDH-201ENST00000315251 VPS13BQ7Z7G8 4022 aa5.66□□□□□ -1.5
CHDH-201ENST00000315251 ANK2Q01484 3957 aa5.66□□□□□ -1.5
CHDH-201ENST00000315251 MT1FP04733 61 aa5.62□□□□□ -1.51
CHDH-201ENST00000315251 FRAS1Q86XX4 4008 aa5.62□□□□□ -1.51
CHDH-201ENST00000315251 SPRR2EP22531 72 aa5.6□□□□□ -1.51
CHDH-201ENST00000315251 SPRR2BP35325 72 aa5.6□□□□□ -1.51
CHDH-201ENST00000315251 SPRR2AP35326 72 aa5.6□□□□□ -1.51
CHDH-201ENST00000315251 DNAH10Q8IVF4 4471 aa5.59□□□□□ -1.51
CHDH-201ENST00000315251 LCE3BQ5TA77 95 aa5.59□□□□□ -1.51
CHDH-201ENST00000315251 DNAH3Q8TD57 4116 aa5.59□□□□□ -1.52
CHDH-201ENST00000315251 LYSTQ99698 3801 aa5.58□□□□□ -1.52
CHDH-201ENST00000315251 KMT2AQ03164 3969 aa5.57□□□□□ -1.52
CHDH-201ENST00000315251 DNAH8Q96JB1 4490 aa5.56□□□□□ -1.52
CHDH-201ENST00000315251 DNAH5Q8TE73 4624 aa5.54□□□□□ -1.52
CHDH-201ENST00000315251 FAT2Q9NYQ8 4349 aa5.48□□□□□ -1.53
CHDH-201ENST00000315251 DNAH17Q9UFH2 4485 aa5.47□□□□□ -1.53
CHDH-201ENST00000315251 DNAH11Q96DT5 4516 aa5.45□□□□□ -1.54
CHDH-201ENST00000315251 FAT1Q14517 4588 aa5.44□□□□□ -1.54
CHDH-201ENST00000315251 DNAH7Q8WXX0 4024 aa5.43□□□□□ -1.54
CHDH-201ENST00000315251 CMYA5Q8N3K9 4069 aa5.42□□□□□ -1.54
CHDH-201ENST00000315251 PLECQ15149 4684 aaKnown RBP5.39□□□□□ -1.55
CHDH-201ENST00000315251 SPRR2DP22532 72 aa5.39□□□□□ -1.55
CHDH-201ENST00000315251 MT1GP13640 62 aa5.38□□□□□ -1.55
CHDH-201ENST00000315251 KRTAP12-4P60329 112 aa5.38□□□□□ -1.55
CHDH-201ENST00000315251 LCE2BO14633 110 aa5.31□□□□□ -1.56
CHDH-201ENST00000315251 DYNC2H1Q8NCM8 4307 aaKnown RBP5.29□□□□□ -1.56
CHDH-201ENST00000315251 LRP1BQ9NZR2 4599 aa5.27□□□□□ -1.57
CHDH-201ENST00000315251 VPS13DQ5THJ4 4388 aa5.26□□□□□ -1.57
CHDH-201ENST00000315251 STARD9Q9P2P6 4700 aa5.25□□□□□ -1.57
CHDH-201ENST00000315251 DNAH6Q9C0G6 4158 aa5.25□□□□□ -1.57
CHDH-201ENST00000315251 KRTAP19-4Q3LI73 84 aa5.25□□□□□ -1.57
CHDH-201ENST00000315251 PRKDCP78527 4128 aaKnown RBP5.23□□□□□ -1.57
CHDH-201ENST00000315251 HECTD4Q9Y4D8 3996 aa5.2□□□□□ -1.58
CHDH-201ENST00000315251 SPRR5A0A1B0GTR4 108 aa5.19□□□□□ -1.58
CHDH-201ENST00000315251 LCE3DQ9BYE3 92 aa5.16□□□□□ -1.58
CHDH-201ENST00000315251 APOBP04114 4563 aaKnown RBP5.16□□□□□ -1.58
CHDH-201ENST00000315251 MT1XP80297 61 aa5.15□□□□□ -1.58
CHDH-201ENST00000315251 KRTAP19-1Q8IUB9 90 aa5.15□□□□□ -1.59
CHDH-201ENST00000315251 KRTAP4-8A0A0G2JLE6 195 aa5.15□□□□□ -1.59
CHDH-201ENST00000315251 KRTAP4-8Q9BYQ9 185 aa5.15□□□□□ -1.59
CHDH-201ENST00000315251 SACSQ9NZJ4 4579 aa5.11□□□□□ -1.59
CHDH-201ENST00000315251 KRTAP19-8Q3LI54 63 aa5.11□□□□□ -1.59
CHDH-201ENST00000315251 LCE3EQ5T5B0 92 aa5.03□□□□□ -1.6
CHDH-201ENST00000315251 LCE2CQ5TA81 110 aa5.03□□□□□ -1.6
CHDH-201ENST00000315251 DNHD1Q96M86 4753 aa4.99□□□□□ -1.61
CHDH-201ENST00000315251 MT4P47944 62 aa4.98□□□□□ -1.61
CHDH-201ENST00000315251 MT1BP07438 61 aa4.98□□□□□ -1.61
CHDH-201ENST00000315251 FAT3Q8TDW7 4589 aa4.97□□□□□ -1.61
CHDH-201ENST00000315251 DYNC1H1Q14204 4646 aaKnown RBP4.97□□□□□ -1.61
CHDH-201ENST00000315251 LCE2DQ5TA82 110 aaPredicted RBP4.97□□□□□ -1.61
CHDH-201ENST00000315251 MYCBP2O75592 4640 aa4.97□□□□□ -1.61
CHDH-201ENST00000315251 LRP1Q07954 4544 aaKnown RBP4.96□□□□□ -1.61
CHDH-201ENST00000315251 RYR1P21817 5038 aa4.93□□□□□ -1.62
CHDH-201ENST00000315251 KRTAP9-8Q9BYQ0 159 aa4.91□□□□□ -1.62
CHDH-201ENST00000315251 KRTAP4-7Q9BYR0 210 aa4.89□□□□□ -1.63
CHDH-201ENST00000315251 KRTAP17-1Q9BYP8 105 aa4.89□□□□□ -1.63
CHDH-201ENST00000315251 KRTAP19-3Q7Z4W3 81 aa4.82□□□□□ -1.64
CHDH-201ENST00000315251 PKHD1P08F94 4074 aa4.82□□□□□ -1.64
CHDH-201ENST00000315251 FLGP20930 4061 aaPredicted RBP4.81□□□□□ -1.64
CHDH-201ENST00000315251 PKD1P98161 4303 aa4.8□□□□□ -1.64
CHDH-201ENST00000315251 KRTAP9-3Q9BYQ3 159 aa4.79□□□□□ -1.64
CHDH-201ENST00000315251 PRM1P04553 51 aa4.79□□□□□ -1.64
CHDH-201ENST00000315251 LCE1BQ5T7P3 118 aa4.77□□□□□ -1.65
CHDH-201ENST00000315251 LPAP08519 4548 aa4.75□□□□□ -1.65
CHDH-201ENST00000315251 MT1LQ93083 61 aa4.73□□□□□ -1.65
CHDH-201ENST00000315251 LCE1DQ5T752 114 aa4.71□□□□□ -1.65
CHDH-201ENST00000315251 PKHD1L1Q86WI1 4243 aa4.71□□□□□ -1.66
CHDH-201ENST00000315251 LOC100996750A0A140TA64 210 aa4.68□□□□□ -1.66
CHDH-201ENST00000315251 KRTAP9-2Q9BYQ4 174 aa4.68□□□□□ -1.66
CHDH-201ENST00000315251 MT3P25713 68 aa4.66□□□□□ -1.66
CHDH-201ENST00000315251 MT1EP04732 61 aa4.66□□□□□ -1.66
CHDH-201ENST00000315251 HSPG2P98160 4391 aa4.63□□□□□ -1.67
CHDH-201ENST00000315251 RYR3Q15413 4870 aa4.61□□□□□ -1.67
CHDH-201ENST00000315251 KRTAP4-3Q9BYR4 195 aa4.57□□□□□ -1.68
CHDH-201ENST00000315251 MT1MQ8N339 61 aa4.57□□□□□ -1.68
CHDH-201ENST00000315251 LRP2P98164 4655 aa4.53□□□□□ -1.68
CHDH-201ENST00000315251 KRTAP9-6A0A140TA67 174 aa4.5□□□□□ -1.69
CHDH-201ENST00000315251 LCE5AQ5TCM9 118 aa4.48□□□□□ -1.69
CHDH-201ENST00000315251 TNXBP22105 4242 aa4.47□□□□□ -1.69
CHDH-201ENST00000315251 KRTAP20-1Q3LI63 56 aa4.46□□□□□ -1.7
CHDH-201ENST00000315251 KRTAP4-9Q9BYQ8 210 aa4.43□□□□□ -1.7
CHDH-201ENST00000315251 SYNE2Q8WXH0 6885 aaKnown RBP4.39□□□□□ -1.71
CHDH-201ENST00000315251 KRTAP19-6Q3LI70 58 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms