RNA–Protein interactions for RNA: ENST00000313005.10

BACE1-201, Transcript of beta-secretase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BACE1, Length 6,326 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BACE1-201ENST00000313005 VPS13CQ709C8 3753 aa6.85□□□□□ -1.31
BACE1-201ENST00000313005 KRTAP23-1A1A580 65 aa6.84□□□□□ -1.31
BACE1-201ENST00000313005 CSMD3Q7Z407 3707 aa6.83□□□□□ -1.32
BACE1-201ENST00000313005 BSNQ9UPA5 3926 aa6.75□□□□□ -1.33
BACE1-201ENST00000313005 MT1HP80294 61 aa6.74□□□□□ -1.33
BACE1-201ENST00000313005 SPRR2FQ96RM1 72 aa6.72□□□□□ -1.33
BACE1-201ENST00000313005 KRTAP4-1Q9BYQ7 146 aa6.71□□□□□ -1.34
BACE1-201ENST00000313005 AKAP9Q99996 3911 aa6.67□□□□□ -1.34
BACE1-201ENST00000313005 KRTAP10-7P60409 375 aaPredicted RBP6.64□□□□□ -1.35
BACE1-201ENST00000313005 DNAH9Q9NYC9 4486 aa6.6□□□□□ -1.35
BACE1-201ENST00000313005 MT2AP02795 61 aa6.56□□□□□ -1.36
BACE1-201ENST00000313005 KRTAP19-5Q3LI72 72 aa6.56□□□□□ -1.36
BACE1-201ENST00000313005 DNAH1Q9P2D7 4330 aa6.55□□□□□ -1.36
BACE1-201ENST00000313005 DNAH2Q9P225 4427 aa6.51□□□□□ -1.37
BACE1-201ENST00000313005 MT1FP04733 61 aa6.45□□□□□ -1.38
BACE1-201ENST00000313005 DNAH5Q8TE73 4624 aa6.45□□□□□ -1.38
BACE1-201ENST00000313005 DNAH10Q8IVF4 4471 aa6.44□□□□□ -1.38
BACE1-201ENST00000313005 SPRR2EP22531 72 aa6.39□□□□□ -1.39
BACE1-201ENST00000313005 SPRR2BP35325 72 aa6.39□□□□□ -1.39
BACE1-201ENST00000313005 SPRR2AP35326 72 aa6.39□□□□□ -1.39
BACE1-201ENST00000313005 SPRR2GQ9BYE4 73 aa6.37□□□□□ -1.39
BACE1-201ENST00000313005 LCE3CQ5T5A8 94 aa6.37□□□□□ -1.39
BACE1-201ENST00000313005 DNAH3Q8TD57 4116 aa6.26□□□□□ -1.41
BACE1-201ENST00000313005 LCE3BQ5TA77 95 aa6.25□□□□□ -1.41
BACE1-201ENST00000313005 PLECQ15149 4684 aaKnown RBP6.25□□□□□ -1.41
BACE1-201ENST00000313005 ZNF469Q96JG9 3925 aaPredicted RBP6.24□□□□□ -1.41
BACE1-201ENST00000313005 DNAH8Q96JB1 4490 aa6.24□□□□□ -1.41
BACE1-201ENST00000313005 FAT2Q9NYQ8 4349 aa6.24□□□□□ -1.41
BACE1-201ENST00000313005 DNAH11Q96DT5 4516 aa6.23□□□□□ -1.41
BACE1-201ENST00000313005 DNAH17Q9UFH2 4485 aa6.17□□□□□ -1.42
BACE1-201ENST00000313005 ANK2Q01484 3957 aa6.16□□□□□ -1.42
BACE1-201ENST00000313005 SPRR2DP22532 72 aa6.16□□□□□ -1.42
BACE1-201ENST00000313005 LRP1BQ9NZR2 4599 aa6.11□□□□□ -1.43
BACE1-201ENST00000313005 VPS13DQ5THJ4 4388 aa6.11□□□□□ -1.43
BACE1-201ENST00000313005 MT1GP13640 62 aa6.09□□□□□ -1.43
BACE1-201ENST00000313005 FAT1Q14517 4588 aa6.09□□□□□ -1.43
BACE1-201ENST00000313005 VPS13BQ7Z7G8 4022 aa6.05□□□□□ -1.44
BACE1-201ENST00000313005 DYNC2H1Q8NCM8 4307 aaKnown RBP6.05□□□□□ -1.44
BACE1-201ENST00000313005 LCE2BO14633 110 aa6.03□□□□□ -1.44
BACE1-201ENST00000313005 STARD9Q9P2P6 4700 aa6□□□□□ -1.45
BACE1-201ENST00000313005 FRAS1Q86XX4 4008 aa6□□□□□ -1.45
BACE1-201ENST00000313005 DYNC1H1Q14204 4646 aaKnown RBP5.99□□□□□ -1.45
BACE1-201ENST00000313005 DNAH7Q8WXX0 4024 aa5.98□□□□□ -1.45
BACE1-201ENST00000313005 SACSQ9NZJ4 4579 aa5.98□□□□□ -1.45
BACE1-201ENST00000313005 KMT2AQ03164 3969 aa5.98□□□□□ -1.45
BACE1-201ENST00000313005 PRKDCP78527 4128 aaKnown RBP5.96□□□□□ -1.45
BACE1-201ENST00000313005 KRTAP12-4P60329 112 aa5.9□□□□□ -1.46
BACE1-201ENST00000313005 CMYA5Q8N3K9 4069 aa5.87□□□□□ -1.47
BACE1-201ENST00000313005 KRTAP4-8A0A0G2JLE6 195 aa5.86□□□□□ -1.47
BACE1-201ENST00000313005 KRTAP4-8Q9BYQ9 185 aa5.86□□□□□ -1.47
BACE1-201ENST00000313005 DNHD1Q96M86 4753 aa5.85□□□□□ -1.47
BACE1-201ENST00000313005 RYR1P21817 5038 aa5.84□□□□□ -1.47
BACE1-201ENST00000313005 MT1XP80297 61 aa5.84□□□□□ -1.47
BACE1-201ENST00000313005 DNAH6Q9C0G6 4158 aa5.83□□□□□ -1.48
BACE1-201ENST00000313005 APOBP04114 4563 aaKnown RBP5.82□□□□□ -1.48
BACE1-201ENST00000313005 KRTAP19-1Q8IUB9 90 aa5.8□□□□□ -1.48
BACE1-201ENST00000313005 KRTAP19-8Q3LI54 63 aa5.79□□□□□ -1.48
BACE1-201ENST00000313005 LYSTQ99698 3801 aa5.77□□□□□ -1.49
BACE1-201ENST00000313005 KRTAP17-1Q9BYP8 105 aa5.75□□□□□ -1.49
BACE1-201ENST00000313005 KRTAP19-4Q3LI73 84 aa5.74□□□□□ -1.49
BACE1-201ENST00000313005 FAT3Q8TDW7 4589 aa5.73□□□□□ -1.49
BACE1-201ENST00000313005 MT1BP07438 61 aa5.7□□□□□ -1.5
BACE1-201ENST00000313005 LCE3DQ9BYE3 92 aa5.69□□□□□ -1.5
BACE1-201ENST00000313005 LCE2CQ5TA81 110 aa5.69□□□□□ -1.5
BACE1-201ENST00000313005 LCE2DQ5TA82 110 aaPredicted RBP5.64□□□□□ -1.51
BACE1-201ENST00000313005 KRTAP9-8Q9BYQ0 159 aa5.63□□□□□ -1.51
BACE1-201ENST00000313005 MT4P47944 62 aa5.59□□□□□ -1.51
BACE1-201ENST00000313005 LRP1Q07954 4544 aaKnown RBP5.59□□□□□ -1.51
BACE1-201ENST00000313005 RYR3Q15413 4870 aa5.58□□□□□ -1.52
BACE1-201ENST00000313005 KRTAP4-7Q9BYR0 210 aa5.56□□□□□ -1.52
BACE1-201ENST00000313005 LCE3EQ5T5B0 92 aa5.54□□□□□ -1.52
BACE1-201ENST00000313005 KRTAP9-3Q9BYQ3 159 aa5.53□□□□□ -1.52
BACE1-201ENST00000313005 HECTD4Q9Y4D8 3996 aa5.48□□□□□ -1.53
BACE1-201ENST00000313005 KRTAP19-3Q7Z4W3 81 aa5.45□□□□□ -1.54
BACE1-201ENST00000313005 PKHD1L1Q86WI1 4243 aa5.45□□□□□ -1.54
BACE1-201ENST00000313005 LPAP08519 4548 aa5.44□□□□□ -1.54
BACE1-201ENST00000313005 MYCBP2O75592 4640 aa5.41□□□□□ -1.54
BACE1-201ENST00000313005 HSPG2P98160 4391 aa5.38□□□□□ -1.55
BACE1-201ENST00000313005 LCE1BQ5T7P3 118 aa5.37□□□□□ -1.55
BACE1-201ENST00000313005 PKD1P98161 4303 aa5.37□□□□□ -1.55
BACE1-201ENST00000313005 SPRR5A0A1B0GTR4 108 aa5.36□□□□□ -1.55
BACE1-201ENST00000313005 MT1LQ93083 61 aa5.34□□□□□ -1.56
BACE1-201ENST00000313005 LOC100996750A0A140TA64 210 aa5.33□□□□□ -1.56
BACE1-201ENST00000313005 HERC1Q15751 4861 aa5.31□□□□□ -1.56
BACE1-201ENST00000313005 LCE1DQ5T752 114 aa5.3□□□□□ -1.56
BACE1-201ENST00000313005 MT1EP04732 61 aa5.28□□□□□ -1.56
BACE1-201ENST00000313005 PRM1P04553 51 aa5.27□□□□□ -1.57
BACE1-201ENST00000313005 KRTAP4-3Q9BYR4 195 aa5.23□□□□□ -1.57
BACE1-201ENST00000313005 KRTAP9-2Q9BYQ4 174 aa5.22□□□□□ -1.57
BACE1-201ENST00000313005 MT3P25713 68 aa5.22□□□□□ -1.57
BACE1-201ENST00000313005 PKHD1P08F94 4074 aa5.21□□□□□ -1.58
BACE1-201ENST00000313005 RYR2Q92736 4967 aa5.18□□□□□ -1.58
BACE1-201ENST00000313005 MT1MQ8N339 61 aa5.18□□□□□ -1.58
BACE1-201ENST00000313005 KIAA1109Q2LD37 5005 aa5.1□□□□□ -1.59
BACE1-201ENST00000313005 TNXBP22105 4242 aa5.09□□□□□ -1.59
BACE1-201ENST00000313005 LCE5AQ5TCM9 118 aa5.05□□□□□ -1.6
BACE1-201ENST00000313005 KRTAP19-6Q3LI70 58 aa5.02□□□□□ -1.61
BACE1-201ENST00000313005 HERC2O95714 4834 aa5□□□□□ -1.61
BACE1-201ENST00000313005 LRP2P98164 4655 aa5□□□□□ -1.61
BACE1-201ENST00000313005 BIRC6Q9NR09 4857 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms