RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 DNAH11Q96DT5 4516 aa7.88□□□□□ -1.15
GABRB3-202ENST00000311550 ALMS1Q8TCU4 4167 aa7.81□□□□□ -1.16
GABRB3-202ENST00000311550 KRTAP15-1Q3LI76 137 aa7.76□□□□□ -1.17
GABRB3-202ENST00000311550 VPS13DQ5THJ4 4388 aa7.74□□□□□ -1.17
GABRB3-202ENST00000311550 DNAH17Q9UFH2 4485 aa7.72□□□□□ -1.17
GABRB3-202ENST00000311550 DNHD1Q96M86 4753 aa7.7□□□□□ -1.18
GABRB3-202ENST00000311550 STARD9Q9P2P6 4700 aa7.7□□□□□ -1.18
GABRB3-202ENST00000311550 LORP23490 312 aaPredicted RBP7.66□□□□□ -1.18
GABRB3-202ENST00000311550 FAT1Q14517 4588 aa7.58□□□□□ -1.2
GABRB3-202ENST00000311550 DNAH2Q9P225 4427 aa7.58□□□□□ -1.2
GABRB3-202ENST00000311550 DNAH8Q96JB1 4490 aa7.58□□□□□ -1.2
GABRB3-202ENST00000311550 DYNC1H1Q14204 4646 aaKnown RBP7.55□□□□□ -1.2
GABRB3-202ENST00000311550 LRP1BQ9NZR2 4599 aa7.53□□□□□ -1.2
GABRB3-202ENST00000311550 DNAH3Q8TD57 4116 aa7.53□□□□□ -1.2
GABRB3-202ENST00000311550 PRKDCP78527 4128 aaKnown RBP7.49□□□□□ -1.21
GABRB3-202ENST00000311550 ANK2Q01484 3957 aa7.49□□□□□ -1.21
GABRB3-202ENST00000311550 KMT2AQ03164 3969 aa7.48□□□□□ -1.21
GABRB3-202ENST00000311550 KRTAP10-12P60413 245 aa7.41□□□□□ -1.22
GABRB3-202ENST00000311550 KRTAP4-1Q9BYQ7 146 aa7.38□□□□□ -1.23
GABRB3-202ENST00000311550 DYNC2H1Q8NCM8 4307 aaKnown RBP7.36□□□□□ -1.23
GABRB3-202ENST00000311550 SACSQ9NZJ4 4579 aa7.36□□□□□ -1.23
GABRB3-202ENST00000311550 LCE3AQ5TA76 89 aa7.33□□□□□ -1.24
GABRB3-202ENST00000311550 LYSTQ99698 3801 aa7.33□□□□□ -1.24
GABRB3-202ENST00000311550 VPS13BQ7Z7G8 4022 aa7.31□□□□□ -1.24
GABRB3-202ENST00000311550 FAT2Q9NYQ8 4349 aa7.3□□□□□ -1.24
GABRB3-202ENST00000311550 FRAS1Q86XX4 4008 aa7.3□□□□□ -1.24
GABRB3-202ENST00000311550 RYR1P21817 5038 aa7.3□□□□□ -1.24
GABRB3-202ENST00000311550 KRTAP12-3P60328 96 aa7.26□□□□□ -1.25
GABRB3-202ENST00000311550 CMYA5Q8N3K9 4069 aa7.26□□□□□ -1.25
GABRB3-202ENST00000311550 KRTAP23-1A1A580 65 aa7.21□□□□□ -1.25
GABRB3-202ENST00000311550 MYCBP2O75592 4640 aa7.2□□□□□ -1.26
GABRB3-202ENST00000311550 APOBP04114 4563 aaKnown RBP7.2□□□□□ -1.26
GABRB3-202ENST00000311550 DNAH6Q9C0G6 4158 aa7.16□□□□□ -1.26
GABRB3-202ENST00000311550 DNAH7Q8WXX0 4024 aa7.12□□□□□ -1.27
GABRB3-202ENST00000311550 HECTD4Q9Y4D8 3996 aa7.12□□□□□ -1.27
GABRB3-202ENST00000311550 INE1O15225 51 aa7.09□□□□□ -1.27
GABRB3-202ENST00000311550 CRCT1Q9UGL9 99 aa7.08□□□□□ -1.28
GABRB3-202ENST00000311550 KIAA1109Q2LD37 5005 aa7.05□□□□□ -1.28
GABRB3-202ENST00000311550 LRP1Q07954 4544 aaKnown RBP7.03□□□□□ -1.28
GABRB3-202ENST00000311550 KRTAP17-1Q9BYP8 105 aa7.03□□□□□ -1.28
GABRB3-202ENST00000311550 MT1HP80294 61 aa7□□□□□ -1.29
GABRB3-202ENST00000311550 RYR3Q15413 4870 aa6.95□□□□□ -1.3
GABRB3-202ENST00000311550 MT2AP02795 61 aa6.94□□□□□ -1.3
GABRB3-202ENST00000311550 FAT3Q8TDW7 4589 aa6.93□□□□□ -1.3
GABRB3-202ENST00000311550 SPRR2GQ9BYE4 73 aa6.91□□□□□ -1.3
GABRB3-202ENST00000311550 HYDINQ4G0P3 5121 aa6.9□□□□□ -1.3
GABRB3-202ENST00000311550 MT1FP04733 61 aa6.86□□□□□ -1.31
GABRB3-202ENST00000311550 PKHD1P08F94 4074 aa6.77□□□□□ -1.32
GABRB3-202ENST00000311550 RYR2Q92736 4967 aa6.74□□□□□ -1.33
GABRB3-202ENST00000311550 LRP2P98164 4655 aa6.69□□□□□ -1.34
GABRB3-202ENST00000311550 KRTAP8-1Q8IUC2 63 aa6.68□□□□□ -1.34
GABRB3-202ENST00000311550 HSPG2P98160 4391 aa6.62□□□□□ -1.35
GABRB3-202ENST00000311550 KRTAP19-1Q8IUB9 90 aa6.61□□□□□ -1.35
GABRB3-202ENST00000311550 KRTAP19-5Q3LI72 72 aa6.59□□□□□ -1.35
GABRB3-202ENST00000311550 KRTAP10-5P60370 271 aa6.58□□□□□ -1.36
GABRB3-202ENST00000311550 PKD1P98161 4303 aa6.57□□□□□ -1.36
GABRB3-202ENST00000311550 HERC2O95714 4834 aa6.54□□□□□ -1.36
GABRB3-202ENST00000311550 LPAP08519 4548 aa6.51□□□□□ -1.37
GABRB3-202ENST00000311550 KMT2CQ8NEZ4 4911 aaKnown RBP6.49□□□□□ -1.37
GABRB3-202ENST00000311550 KRTAP10-7P60409 375 aaPredicted RBP6.48□□□□□ -1.37
GABRB3-202ENST00000311550 LCE3CQ5T5A8 94 aa6.45□□□□□ -1.38
GABRB3-202ENST00000311550 KRTAP19-8Q3LI54 63 aa6.44□□□□□ -1.38
GABRB3-202ENST00000311550 MT1XP80297 61 aa6.38□□□□□ -1.39
GABRB3-202ENST00000311550 LCE2CQ5TA81 110 aa6.34□□□□□ -1.39
GABRB3-202ENST00000311550 MT1BP07438 61 aa6.34□□□□□ -1.4
GABRB3-202ENST00000311550 KRTAP9-8Q9BYQ0 159 aa6.33□□□□□ -1.4
GABRB3-202ENST00000311550 TNXBP22105 4242 aa6.33□□□□□ -1.4
GABRB3-202ENST00000311550 PKHD1L1Q86WI1 4243 aa6.33□□□□□ -1.4
GABRB3-202ENST00000311550 SPRR2FQ96RM1 72 aa6.24□□□□□ -1.41
GABRB3-202ENST00000311550 HERC1Q15751 4861 aa6.22□□□□□ -1.41
GABRB3-202ENST00000311550 BIRC6Q9NR09 4857 aa6.22□□□□□ -1.41
GABRB3-202ENST00000311550 PCLOQ9Y6V0 5065 aa6.22□□□□□ -1.41
GABRB3-202ENST00000311550 KRTAP19-2Q3LHN2 52 aa6.19□□□□□ -1.42
GABRB3-202ENST00000311550 SPRR5A0A1B0GTR4 108 aa6.18□□□□□ -1.42
GABRB3-202ENST00000311550 KRTAP4-8A0A0G2JLE6 195 aa6.16□□□□□ -1.42
GABRB3-202ENST00000311550 KRTAP4-8Q9BYQ9 185 aa6.16□□□□□ -1.42
GABRB3-202ENST00000311550 KRTAP9-3Q9BYQ3 159 aa6.14□□□□□ -1.43
GABRB3-202ENST00000311550 MUC17Q685J3 4493 aa6.09□□□□□ -1.43
GABRB3-202ENST00000311550 EPPK1P58107 5090 aaKnown RBP6.09□□□□□ -1.43
GABRB3-202ENST00000311550 ABCA13Q86UQ4 5058 aa6.06□□□□□ -1.44
GABRB3-202ENST00000311550 FLGP20930 4061 aaPredicted RBP6.03□□□□□ -1.44
GABRB3-202ENST00000311550 KRTAP19-4Q3LI73 84 aa6.01□□□□□ -1.45
GABRB3-202ENST00000311550 MT1GP13640 62 aa5.96□□□□□ -1.46
GABRB3-202ENST00000311550 LCE2BO14633 110 aa5.9□□□□□ -1.46
GABRB3-202ENST00000311550 LCE3BQ5TA77 95 aa5.89□□□□□ -1.47
GABRB3-202ENST00000311550 KRTAP4-7Q9BYR0 210 aa5.87□□□□□ -1.47
GABRB3-202ENST00000311550 KRTAP12-4P60329 112 aa5.79□□□□□ -1.48
GABRB3-202ENST00000311550 UBR4Q5T4S7 5183 aa5.75□□□□□ -1.49
GABRB3-202ENST00000311550 FAT4Q6V0I7 4981 aa5.74□□□□□ -1.49
GABRB3-202ENST00000311550 SPRR2EP22531 72 aa5.74□□□□□ -1.49
GABRB3-202ENST00000311550 SPRR2BP35325 72 aa5.74□□□□□ -1.49
GABRB3-202ENST00000311550 SPRR2AP35326 72 aa5.74□□□□□ -1.49
GABRB3-202ENST00000311550 RNF213Q63HN8 5207 aa5.72□□□□□ -1.49
GABRB3-202ENST00000311550 MT1LQ93083 61 aa5.71□□□□□ -1.5
GABRB3-202ENST00000311550 HMCN2Q8NDA2 5059 aa5.7□□□□□ -1.5
GABRB3-202ENST00000311550 MUC2Q02817 5179 aa5.68□□□□□ -1.5
GABRB3-202ENST00000311550 MT1EP04732 61 aa5.67□□□□□ -1.5
GABRB3-202ENST00000311550 FSIP2Q5CZC0 6907 aa5.63□□□□□ -1.51
GABRB3-202ENST00000311550 KRTAP19-3Q7Z4W3 81 aa5.61□□□□□ -1.51
GABRB3-202ENST00000311550 SPRR2DP22532 72 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms