RNA–Protein interactions for RNA: ENST00000310931.8

HDLBP-201, Transcript of high density lipoprotein binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDLBP, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-201ENST00000310931 RYR2Q92736 4967 aa5.16□□□□□ -1.58
HDLBP-201ENST00000310931 M0R2T5 61 aa5.15□□□□□ -1.58
HDLBP-201ENST00000310931 KRTAP10-8P60410 259 aa5.14□□□□□ -1.59
HDLBP-201ENST00000310931 HECTD4Q9Y4D8 3996 aa5.13□□□□□ -1.59
HDLBP-201ENST00000310931 DYNC1H1Q14204 4646 aaKnown RBP5.13□□□□□ -1.59
HDLBP-201ENST00000310931 FAT2Q9NYQ8 4349 aa5.13□□□□□ -1.59
HDLBP-201ENST00000310931 PP632Q6XCG6 107 aa5.11□□□□□ -1.59
HDLBP-201ENST00000310931 DNAH5Q8TE73 4624 aa5.11□□□□□ -1.59
HDLBP-201ENST00000310931 TNP1P09430 55 aa5.11□□□□□ -1.59
HDLBP-201ENST00000310931 PKD1P98161 4303 aa5.08□□□□□ -1.6
HDLBP-201ENST00000310931 HYDINQ4G0P3 5121 aa5.06□□□□□ -1.6
HDLBP-201ENST00000310931 LRP1BQ9NZR2 4599 aa5.04□□□□□ -1.6
HDLBP-201ENST00000310931 KRTAP13-3Q3SY46 172 aa5.01□□□□□ -1.61
HDLBP-201ENST00000310931 APOBP04114 4563 aaKnown RBP4.98□□□□□ -1.61
HDLBP-201ENST00000310931 TPRXLQ17RH7 258 aa4.97□□□□□ -1.61
HDLBP-201ENST00000310931 PKHD1L1Q86WI1 4243 aa4.96□□□□□ -1.61
HDLBP-201ENST00000310931 MT1HL1P0DM35 61 aa4.94□□□□□ -1.62
HDLBP-201ENST00000310931 KMT2CQ8NEZ4 4911 aaKnown RBP4.93□□□□□ -1.62
HDLBP-201ENST00000310931 VPS13BQ7Z7G8 4022 aa4.91□□□□□ -1.62
HDLBP-201ENST00000310931 RYR1P21817 5038 aa4.9□□□□□ -1.62
HDLBP-201ENST00000310931 PKHD1P08F94 4074 aa4.86□□□□□ -1.63
HDLBP-201ENST00000310931 RYR3Q15413 4870 aa4.86□□□□□ -1.63
HDLBP-201ENST00000310931 HSPG2P98160 4391 aa4.84□□□□□ -1.63
HDLBP-201ENST00000310931 XP32Q5T750 250 aa4.82□□□□□ -1.64
HDLBP-201ENST00000310931 KRTAP4-5Q9BYR2 181 aa4.82□□□□□ -1.64
HDLBP-201ENST00000310931 BIRC6Q9NR09 4857 aa4.82□□□□□ -1.64
HDLBP-201ENST00000310931 KRTAP12-2P59991 146 aa4.81□□□□□ -1.64
HDLBP-201ENST00000310931 KRTAP15-1Q3LI76 137 aa4.8□□□□□ -1.64
HDLBP-201ENST00000310931 KRTAP17-1Q9BYP8 105 aa4.8□□□□□ -1.64
HDLBP-201ENST00000310931 FAT1Q14517 4588 aa4.78□□□□□ -1.64
HDLBP-201ENST00000310931 KRTAP12-1P59990 96 aa4.72□□□□□ -1.65
HDLBP-201ENST00000310931 KIAA1109Q2LD37 5005 aa4.72□□□□□ -1.65
HDLBP-201ENST00000310931 FAT3Q8TDW7 4589 aa4.71□□□□□ -1.66
HDLBP-201ENST00000310931 HERC2O95714 4834 aa4.7□□□□□ -1.66
HDLBP-201ENST00000310931 EPPK1P58107 5090 aaKnown RBP4.69□□□□□ -1.66
HDLBP-201ENST00000310931 PRO2289Q9P1D8 64 aa4.68□□□□□ -1.66
HDLBP-201ENST00000310931 KRTAP3-1Q9BYR8 98 aa4.67□□□□□ -1.66
HDLBP-201ENST00000310931 KRTAP13-4Q3LI77 160 aa4.66□□□□□ -1.66
HDLBP-201ENST00000310931 TNXBP22105 4242 aa4.65□□□□□ -1.66
HDLBP-201ENST00000310931 INE1O15225 51 aa4.65□□□□□ -1.66
HDLBP-201ENST00000310931 KRTAP10-6P60371 365 aaPredicted RBP4.56□□□□□ -1.68
HDLBP-201ENST00000310931 MYCBP2O75592 4640 aa4.55□□□□□ -1.68
HDLBP-201ENST00000310931 LRP1Q07954 4544 aaKnown RBP4.55□□□□□ -1.68
HDLBP-201ENST00000310931 ABCA13Q86UQ4 5058 aa4.48□□□□□ -1.69
HDLBP-201ENST00000310931 MUC17Q685J3 4493 aa4.43□□□□□ -1.7
HDLBP-201ENST00000310931 KRTAP3-3Q9BYR6 98 aa4.43□□□□□ -1.7
HDLBP-201ENST00000310931 PCLOQ9Y6V0 5065 aa4.4□□□□□ -1.7
HDLBP-201ENST00000310931 KRTAP3-2Q9BYR7 98 aa4.4□□□□□ -1.71
HDLBP-201ENST00000310931 KRTAP10-10P60014 251 aa4.39□□□□□ -1.71
HDLBP-201ENST00000310931 KRTAP4-1Q9BYQ7 146 aa4.34□□□□□ -1.71
HDLBP-201ENST00000310931 HERC1Q15751 4861 aa4.33□□□□□ -1.72
HDLBP-201ENST00000310931 HMCN2Q8NDA2 5059 aa4.25□□□□□ -1.73
HDLBP-201ENST00000310931 KRTAP19-2Q3LHN2 52 aa4.22□□□□□ -1.73
HDLBP-201ENST00000310931 KRTAP23-1A1A580 65 aa4.21□□□□□ -1.74
HDLBP-201ENST00000310931 LRP2P98164 4655 aa4.2□□□□□ -1.74
HDLBP-201ENST00000310931 LPAP08519 4548 aa4.19□□□□□ -1.74
HDLBP-201ENST00000310931 MT1HP80294 61 aa4.17□□□□□ -1.74
HDLBP-201ENST00000310931 LCE2CQ5TA81 110 aa4.16□□□□□ -1.74
HDLBP-201ENST00000310931 LORP23490 312 aaPredicted RBP4.07□□□□□ -1.76
HDLBP-201ENST00000310931 KRTAP12-3P60328 96 aa4.05□□□□□ -1.76
HDLBP-201ENST00000310931 FLGP20930 4061 aaPredicted RBP4.05□□□□□ -1.76
HDLBP-201ENST00000310931 KRTAP10-12P60413 245 aa4.02□□□□□ -1.77
HDLBP-201ENST00000310931 MT2AP02795 61 aa4□□□□□ -1.77
HDLBP-201ENST00000310931 LCE3AQ5TA76 89 aa4□□□□□ -1.77
HDLBP-201ENST00000310931 RNF213Q63HN8 5207 aa4□□□□□ -1.77
HDLBP-201ENST00000310931 LCE2AQ5TA79 106 aaPredicted RBP3.99□□□□□ -1.77
HDLBP-201ENST00000310931 SPRR2GQ9BYE4 73 aa3.99□□□□□ -1.77
HDLBP-201ENST00000310931 CRCT1Q9UGL9 99 aa3.98□□□□□ -1.77
HDLBP-201ENST00000310931 KRTAP9-8Q9BYQ0 159 aa3.97□□□□□ -1.77
HDLBP-201ENST00000310931 SPRR5A0A1B0GTR4 108 aa3.96□□□□□ -1.78
HDLBP-201ENST00000310931 MT1FP04733 61 aa3.94□□□□□ -1.78
HDLBP-201ENST00000310931 KRTAP10-5P60370 271 aa3.91□□□□□ -1.78
HDLBP-201ENST00000310931 KRTAP19-8Q3LI54 63 aa3.89□□□□□ -1.79
HDLBP-201ENST00000310931 FAT4Q6V0I7 4981 aa3.88□□□□□ -1.79
HDLBP-201ENST00000310931 UBR4Q5T4S7 5183 aa3.88□□□□□ -1.79
HDLBP-201ENST00000310931 KRTAP19-1Q8IUB9 90 aa3.85□□□□□ -1.79
HDLBP-201ENST00000310931 KRTAP9-3Q9BYQ3 159 aa3.85□□□□□ -1.79
HDLBP-201ENST00000310931 MUC2Q02817 5179 aa3.83□□□□□ -1.8
HDLBP-201ENST00000310931 LCE2DQ5TA82 110 aaPredicted RBP3.79□□□□□ -1.8
HDLBP-201ENST00000310931 MT1BP07438 61 aa3.73□□□□□ -1.81
HDLBP-201ENST00000310931 LCE2BO14633 110 aa3.67□□□□□ -1.82
HDLBP-201ENST00000310931 MT1XP80297 61 aa3.61□□□□□ -1.83
HDLBP-201ENST00000310931 KRTAP19-6Q3LI70 58 aa3.61□□□□□ -1.83
HDLBP-201ENST00000310931 KRTAP8-1Q8IUC2 63 aa3.58□□□□□ -1.84
HDLBP-201ENST00000310931 SYNE1Q8NF91 8797 aaKnown RBP3.56□□□□□ -1.84
HDLBP-201ENST00000310931 KRTAP9-2Q9BYQ4 174 aa3.53□□□□□ -1.85
HDLBP-201ENST00000310931 LCE3CQ5T5A8 94 aa3.52□□□□□ -1.85
HDLBP-201ENST00000310931 KRTAP12-4P60329 112 aa3.5□□□□□ -1.85
HDLBP-201ENST00000310931 KRTAP19-4Q3LI73 84 aa3.46□□□□□ -1.86
HDLBP-201ENST00000310931 KRTAP19-5Q3LI72 72 aa3.45□□□□□ -1.86
HDLBP-201ENST00000310931 KRTAP10-7P60409 375 aaPredicted RBP3.42□□□□□ -1.86
HDLBP-201ENST00000310931 USH2AO75445 5202 aa3.37□□□□□ -1.87
HDLBP-201ENST00000310931 KRTAP9-6A0A140TA67 174 aa3.32□□□□□ -1.88
HDLBP-201ENST00000310931 SSPOA2VEC9 5147 aa3.29□□□□□ -1.88
HDLBP-201ENST00000310931 OBSCNQ5VST9 7968 aa3.28□□□□□ -1.88
HDLBP-201ENST00000310931 LCE3BQ5TA77 95 aa3.27□□□□□ -1.89
HDLBP-201ENST00000310931 KRTAP4-8A0A0G2JLE6 195 aa3.22□□□□□ -1.89
HDLBP-201ENST00000310931 KRTAP4-8Q9BYQ9 185 aa3.22□□□□□ -1.89
HDLBP-201ENST00000310931 KMT2DO14686 5537 aa3.22□□□□□ -1.89
HDLBP-201ENST00000310931 MT1EP04732 61 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms