RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 PLECQ15149 4684 aaKnown RBP6.97□□□□□ -1.29
LEMD3-201ENST00000308330 KRTAP3-3Q9BYR6 98 aa6.91□□□□□ -1.3
LEMD3-201ENST00000308330 DNAH11Q96DT5 4516 aa6.87□□□□□ -1.31
LEMD3-201ENST00000308330 ALMS1Q8TCU4 4167 aa6.83□□□□□ -1.32
LEMD3-201ENST00000308330 RYR1P21817 5038 aa6.83□□□□□ -1.32
LEMD3-201ENST00000308330 FAT1Q14517 4588 aa6.79□□□□□ -1.32
LEMD3-201ENST00000308330 DYNC1H1Q14204 4646 aaKnown RBP6.76□□□□□ -1.33
LEMD3-201ENST00000308330 PRKDCP78527 4128 aaKnown RBP6.76□□□□□ -1.33
LEMD3-201ENST00000308330 DNAH1Q9P2D7 4330 aa6.75□□□□□ -1.33
LEMD3-201ENST00000308330 KIAA1109Q2LD37 5005 aa6.75□□□□□ -1.33
LEMD3-201ENST00000308330 STARD9Q9P2P6 4700 aa6.69□□□□□ -1.34
LEMD3-201ENST00000308330 LRP1BQ9NZR2 4599 aa6.67□□□□□ -1.34
LEMD3-201ENST00000308330 VPS13DQ5THJ4 4388 aa6.66□□□□□ -1.34
LEMD3-201ENST00000308330 DNAH10Q8IVF4 4471 aa6.64□□□□□ -1.35
LEMD3-201ENST00000308330 RYR3Q15413 4870 aa6.6□□□□□ -1.35
LEMD3-201ENST00000308330 SACSQ9NZJ4 4579 aa6.51□□□□□ -1.37
LEMD3-201ENST00000308330 DNAH17Q9UFH2 4485 aa6.51□□□□□ -1.37
LEMD3-201ENST00000308330 ANK2Q01484 3957 aa6.5□□□□□ -1.37
LEMD3-201ENST00000308330 KRTAP4-1Q9BYQ7 146 aa6.49□□□□□ -1.37
LEMD3-201ENST00000308330 LYSTQ99698 3801 aa6.44□□□□□ -1.38
LEMD3-201ENST00000308330 DNAH2Q9P225 4427 aa6.43□□□□□ -1.38
LEMD3-201ENST00000308330 DNAH8Q96JB1 4490 aa6.42□□□□□ -1.38
LEMD3-201ENST00000308330 FAT2Q9NYQ8 4349 aa6.4□□□□□ -1.38
LEMD3-201ENST00000308330 KMT2AQ03164 3969 aa6.39□□□□□ -1.39
LEMD3-201ENST00000308330 MYCBP2O75592 4640 aa6.38□□□□□ -1.39
LEMD3-201ENST00000308330 LORP23490 312 aaPredicted RBP6.37□□□□□ -1.39
LEMD3-201ENST00000308330 KRTAP17-1Q9BYP8 105 aa6.37□□□□□ -1.39
LEMD3-201ENST00000308330 HERC2O95714 4834 aa6.36□□□□□ -1.39
LEMD3-201ENST00000308330 HYDINQ4G0P3 5121 aa6.36□□□□□ -1.39
LEMD3-201ENST00000308330 KRTAP10-12P60413 245 aa6.35□□□□□ -1.39
LEMD3-201ENST00000308330 MT1HP80294 61 aa6.34□□□□□ -1.39
LEMD3-201ENST00000308330 VPS13BQ7Z7G8 4022 aa6.33□□□□□ -1.4
LEMD3-201ENST00000308330 DYNC2H1Q8NCM8 4307 aaKnown RBP6.32□□□□□ -1.4
LEMD3-201ENST00000308330 LCE3AQ5TA76 89 aa6.31□□□□□ -1.4
LEMD3-201ENST00000308330 KRTAP12-3P60328 96 aa6.3□□□□□ -1.4
LEMD3-201ENST00000308330 APOBP04114 4563 aaKnown RBP6.29□□□□□ -1.4
LEMD3-201ENST00000308330 FAT3Q8TDW7 4589 aa6.26□□□□□ -1.41
LEMD3-201ENST00000308330 BIRC6Q9NR09 4857 aa6.25□□□□□ -1.41
LEMD3-201ENST00000308330 RYR2Q92736 4967 aa6.24□□□□□ -1.41
LEMD3-201ENST00000308330 LRP1Q07954 4544 aaKnown RBP6.23□□□□□ -1.41
LEMD3-201ENST00000308330 MT2AP02795 61 aa6.21□□□□□ -1.42
LEMD3-201ENST00000308330 SPRR5A0A1B0GTR4 108 aa6.18□□□□□ -1.42
LEMD3-201ENST00000308330 CRCT1Q9UGL9 99 aa6.15□□□□□ -1.43
LEMD3-201ENST00000308330 DNAH3Q8TD57 4116 aa6.11□□□□□ -1.43
LEMD3-201ENST00000308330 KRTAP8-1Q8IUC2 63 aa6.1□□□□□ -1.43
LEMD3-201ENST00000308330 MT1FP04733 61 aa6.09□□□□□ -1.43
LEMD3-201ENST00000308330 PCLOQ9Y6V0 5065 aa6.09□□□□□ -1.44
LEMD3-201ENST00000308330 KMT2CQ8NEZ4 4911 aaKnown RBP6.05□□□□□ -1.44
LEMD3-201ENST00000308330 LRP2P98164 4655 aa6.02□□□□□ -1.45
LEMD3-201ENST00000308330 DNAH6Q9C0G6 4158 aa6.01□□□□□ -1.45
LEMD3-201ENST00000308330 SPRR2GQ9BYE4 73 aa6.01□□□□□ -1.45
LEMD3-201ENST00000308330 CMYA5Q8N3K9 4069 aa5.99□□□□□ -1.45
LEMD3-201ENST00000308330 KRTAP10-5P60370 271 aa5.96□□□□□ -1.46
LEMD3-201ENST00000308330 PKHD1P08F94 4074 aa5.91□□□□□ -1.46
LEMD3-201ENST00000308330 HERC1Q15751 4861 aa5.89□□□□□ -1.47
LEMD3-201ENST00000308330 HSPG2P98160 4391 aa5.89□□□□□ -1.47
LEMD3-201ENST00000308330 DNAH7Q8WXX0 4024 aa5.83□□□□□ -1.48
LEMD3-201ENST00000308330 SPRR2FQ96RM1 72 aa5.8□□□□□ -1.48
LEMD3-201ENST00000308330 EPPK1P58107 5090 aaKnown RBP5.8□□□□□ -1.48
LEMD3-201ENST00000308330 HECTD4Q9Y4D8 3996 aa5.79□□□□□ -1.48
LEMD3-201ENST00000308330 PKD1P98161 4303 aa5.76□□□□□ -1.49
LEMD3-201ENST00000308330 KRTAP19-1Q8IUB9 90 aa5.74□□□□□ -1.49
LEMD3-201ENST00000308330 ABCA13Q86UQ4 5058 aa5.74□□□□□ -1.49
LEMD3-201ENST00000308330 FRAS1Q86XX4 4008 aa5.72□□□□□ -1.49
LEMD3-201ENST00000308330 LCE2CQ5TA81 110 aa5.71□□□□□ -1.5
LEMD3-201ENST00000308330 UBR4Q5T4S7 5183 aa5.7□□□□□ -1.5
LEMD3-201ENST00000308330 KRTAP9-8Q9BYQ0 159 aa5.69□□□□□ -1.5
LEMD3-201ENST00000308330 KRTAP19-8Q3LI54 63 aa5.66□□□□□ -1.5
LEMD3-201ENST00000308330 FSIP2Q5CZC0 6907 aa5.62□□□□□ -1.51
LEMD3-201ENST00000308330 LCE3CQ5T5A8 94 aa5.62□□□□□ -1.51
LEMD3-201ENST00000308330 KRTAP19-5Q3LI72 72 aa5.59□□□□□ -1.51
LEMD3-201ENST00000308330 LPAP08519 4548 aa5.59□□□□□ -1.52
LEMD3-201ENST00000308330 KRTAP12-4P60329 112 aa5.58□□□□□ -1.52
LEMD3-201ENST00000308330 MT1BP07438 61 aa5.54□□□□□ -1.52
LEMD3-201ENST00000308330 KRTAP9-3Q9BYQ3 159 aa5.54□□□□□ -1.52
LEMD3-201ENST00000308330 KRTAP10-7P60409 375 aaPredicted RBP5.54□□□□□ -1.52
LEMD3-201ENST00000308330 PKHD1L1Q86WI1 4243 aa5.52□□□□□ -1.53
LEMD3-201ENST00000308330 MT1XP80297 61 aa5.47□□□□□ -1.53
LEMD3-201ENST00000308330 KRTAP19-2Q3LHN2 52 aa5.47□□□□□ -1.53
LEMD3-201ENST00000308330 SPRR2EP22531 72 aa5.43□□□□□ -1.54
LEMD3-201ENST00000308330 SPRR2BP35325 72 aa5.43□□□□□ -1.54
LEMD3-201ENST00000308330 SPRR2AP35326 72 aa5.43□□□□□ -1.54
LEMD3-201ENST00000308330 RNF213Q63HN8 5207 aa5.43□□□□□ -1.54
LEMD3-201ENST00000308330 FAT4Q6V0I7 4981 aa5.38□□□□□ -1.55
LEMD3-201ENST00000308330 LCE2BO14633 110 aa5.38□□□□□ -1.55
LEMD3-201ENST00000308330 KRTAP4-8A0A0G2JLE6 195 aa5.36□□□□□ -1.55
LEMD3-201ENST00000308330 KRTAP4-8Q9BYQ9 185 aa5.36□□□□□ -1.55
LEMD3-201ENST00000308330 MUC17Q685J3 4493 aa5.35□□□□□ -1.55
LEMD3-201ENST00000308330 SYNE1Q8NF91 8797 aaKnown RBP5.34□□□□□ -1.55
LEMD3-201ENST00000308330 KRTAP9-2Q9BYQ4 174 aa5.33□□□□□ -1.56
LEMD3-201ENST00000308330 TNXBP22105 4242 aa5.27□□□□□ -1.57
LEMD3-201ENST00000308330 KRTAP19-4Q3LI73 84 aa5.26□□□□□ -1.57
LEMD3-201ENST00000308330 LCE2AQ5TA79 106 aaPredicted RBP5.25□□□□□ -1.57
LEMD3-201ENST00000308330 SPRR2DP22532 72 aa5.25□□□□□ -1.57
LEMD3-201ENST00000308330 HMCN2Q8NDA2 5059 aa5.24□□□□□ -1.57
LEMD3-201ENST00000308330 FLGP20930 4061 aaPredicted RBP5.23□□□□□ -1.57
LEMD3-201ENST00000308330 MT1GP13640 62 aa5.16□□□□□ -1.58
LEMD3-201ENST00000308330 MUC2Q02817 5179 aa5.14□□□□□ -1.59
LEMD3-201ENST00000308330 KRTAP19-6Q3LI70 58 aa5.09□□□□□ -1.59
LEMD3-201ENST00000308330 LCE2DQ5TA82 110 aaPredicted RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms