RNA–Protein interactions for RNA: ENST00000306320.9

RETREG1-201, Transcript of reticulophagy regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG1, Length 3,268 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-201ENST00000306320 NDUFAF8A1L188 74 aa9.53□□□□□ -0.88
RETREG1-201ENST00000306320 A0A1B0GVY2 172 aa9.51□□□□□ -0.89
RETREG1-201ENST00000306320 RYR3Q15413 4870 aa9.48□□□□□ -0.89
RETREG1-201ENST00000306320 RPL37P61927 97 aaKnown RBP9.46□□□□□ -0.89
RETREG1-201ENST00000306320 KIAA1109Q2LD37 5005 aa9.45□□□□□ -0.9
RETREG1-201ENST00000306320 PKHD1L1Q86WI1 4243 aa9.44□□□□□ -0.9
RETREG1-201ENST00000306320 KRTAP10-4P60372 401 aaPredicted RBP9.44□□□□□ -0.9
RETREG1-201ENST00000306320 TPRXLQ17RH7 258 aa9.43□□□□□ -0.9
RETREG1-201ENST00000306320 FAT3Q8TDW7 4589 aa9.43□□□□□ -0.9
RETREG1-201ENST00000306320 KRTAP13-4Q3LI77 160 aa9.39□□□□□ -0.91
RETREG1-201ENST00000306320 KRTAP21-3Q3LHN1 58 aa9.36□□□□□ -0.91
RETREG1-201ENST00000306320 Q5VSD8 79 aa9.36□□□□□ -0.91
RETREG1-201ENST00000306320 HSPG2P98160 4391 aa9.35□□□□□ -0.91
RETREG1-201ENST00000306320 KRTAP17-1Q9BYP8 105 aa9.34□□□□□ -0.91
RETREG1-201ENST00000306320 C20orf166-AS1Q96NR2 134 aa9.29□□□□□ -0.92
RETREG1-201ENST00000306320 RYR1P21817 5038 aa9.25□□□□□ -0.93
RETREG1-201ENST00000306320 LPAP08519 4548 aa9.21□□□□□ -0.93
RETREG1-201ENST00000306320 EPPK1P58107 5090 aaKnown RBP9.21□□□□□ -0.93
RETREG1-201ENST00000306320 KRTAP10-6P60371 365 aaPredicted RBP9.21□□□□□ -0.94
RETREG1-201ENST00000306320 RPS29P62273 56 aaKnown RBP9.21□□□□□ -0.94
RETREG1-201ENST00000306320 TNXBP22105 4242 aa9.2□□□□□ -0.94
RETREG1-201ENST00000306320 S4R3F8 94 aa9.18□□□□□ -0.94
RETREG1-201ENST00000306320 KRTAP12-2P59991 146 aa9.16□□□□□ -0.94
RETREG1-201ENST00000306320 LRP2P98164 4655 aa9.13□□□□□ -0.95
RETREG1-201ENST00000306320 KRTAP10-8P60410 259 aa9.11□□□□□ -0.95
RETREG1-201ENST00000306320 KRTAP3-3Q9BYR6 98 aa9.08□□□□□ -0.96
RETREG1-201ENST00000306320 ABCA13Q86UQ4 5058 aa9.05□□□□□ -0.96
RETREG1-201ENST00000306320 XP32Q5T750 250 aa9.05□□□□□ -0.96
RETREG1-201ENST00000306320 KRTAP3-2Q9BYR7 98 aa9.05□□□□□ -0.96
RETREG1-201ENST00000306320 KRTAP15-1Q3LI76 137 aa9.04□□□□□ -0.96
RETREG1-201ENST00000306320 KRTAP4-5Q9BYR2 181 aa8.98□□□□□ -0.97
RETREG1-201ENST00000306320 MT1HL1P0DM35 61 aa8.93□□□□□ -0.98
RETREG1-201ENST00000306320 KRTAP12-1P59990 96 aa8.92□□□□□ -0.98
RETREG1-201ENST00000306320 M0QZ58 72 aa8.82□□□□□ -1
RETREG1-201ENST00000306320 A0A0A0MQY5 61 aa8.79□□□□□ -1
RETREG1-201ENST00000306320 MUC2Q02817 5179 aa8.76□□□□□ -1.01
RETREG1-201ENST00000306320 R4GN34 69 aa8.73□□□□□ -1.01
RETREG1-201ENST00000306320 LUZP6Q538Z0 58 aa8.71□□□□□ -1.01
RETREG1-201ENST00000306320 HERC2O95714 4834 aa8.67□□□□□ -1.02
RETREG1-201ENST00000306320 PLAC4Q8WY50 150 aa8.66□□□□□ -1.02
RETREG1-201ENST00000306320 J3QL48 77 aa8.63□□□□□ -1.03
RETREG1-201ENST00000306320 CAMK2N1Q7Z7J9 78 aa8.49□□□□□ -1.05
RETREG1-201ENST00000306320 HERC1Q15751 4861 aa8.47□□□□□ -1.05
RETREG1-201ENST00000306320 KRTAP4-1Q9BYQ7 146 aa8.47□□□□□ -1.05
RETREG1-201ENST00000306320 LORP23490 312 aaPredicted RBP8.44□□□□□ -1.06
RETREG1-201ENST00000306320 MUC17Q685J3 4493 aa8.33□□□□□ -1.08
RETREG1-201ENST00000306320 SEC61BP60468 96 aaKnown RBP8.32□□□□□ -1.08
RETREG1-201ENST00000306320 FAT4Q6V0I7 4981 aa8.32□□□□□ -1.08
RETREG1-201ENST00000306320 PCLOQ9Y6V0 5065 aa8.28□□□□□ -1.08
RETREG1-201ENST00000306320 RNF213Q63HN8 5207 aa8.25□□□□□ -1.09
RETREG1-201ENST00000306320 BIRC6Q9NR09 4857 aa8.18□□□□□ -1.1
RETREG1-201ENST00000306320 UBR4Q5T4S7 5183 aa8.06□□□□□ -1.12
RETREG1-201ENST00000306320 PP632Q6XCG6 107 aa8□□□□□ -1.13
RETREG1-201ENST00000306320 HMCN2Q8NDA2 5059 aa7.99□□□□□ -1.13
RETREG1-201ENST00000306320 KRTAP19-2Q3LHN2 52 aa7.97□□□□□ -1.13
RETREG1-201ENST00000306320 TNP1P09430 55 aa7.94□□□□□ -1.14
RETREG1-201ENST00000306320 M0R2T5 61 aa7.9□□□□□ -1.14
RETREG1-201ENST00000306320 FLGP20930 4061 aaPredicted RBP7.87□□□□□ -1.15
RETREG1-201ENST00000306320 LCE2CQ5TA81 110 aa7.64□□□□□ -1.19
RETREG1-201ENST00000306320 KRTAP10-10P60014 251 aa7.56□□□□□ -1.2
RETREG1-201ENST00000306320 MT1HP80294 61 aa7.51□□□□□ -1.21
RETREG1-201ENST00000306320 LCE3AQ5TA76 89 aa7.49□□□□□ -1.21
RETREG1-201ENST00000306320 SPRR5A0A1B0GTR4 108 aa7.44□□□□□ -1.22
RETREG1-201ENST00000306320 MT1FP04733 61 aa7.44□□□□□ -1.22
RETREG1-201ENST00000306320 KRTAP19-1Q8IUB9 90 aa7.43□□□□□ -1.22
RETREG1-201ENST00000306320 USH2AO75445 5202 aa7.39□□□□□ -1.23
RETREG1-201ENST00000306320 MT2AP02795 61 aa7.37□□□□□ -1.23
RETREG1-201ENST00000306320 PRO2289Q9P1D8 64 aa7.34□□□□□ -1.23
RETREG1-201ENST00000306320 KRTAP9-8Q9BYQ0 159 aa7.27□□□□□ -1.25
RETREG1-201ENST00000306320 SPRR2GQ9BYE4 73 aa7.27□□□□□ -1.25
RETREG1-201ENST00000306320 KRTAP23-1A1A580 65 aa7.23□□□□□ -1.25
RETREG1-201ENST00000306320 KMT2DO14686 5537 aa7.18□□□□□ -1.26
RETREG1-201ENST00000306320 FSIP2Q5CZC0 6907 aa7.13□□□□□ -1.27
RETREG1-201ENST00000306320 INE1O15225 51 aa7.08□□□□□ -1.28
RETREG1-201ENST00000306320 MT1BP07438 61 aa7.05□□□□□ -1.28
RETREG1-201ENST00000306320 KRTAP12-3P60328 96 aa7.05□□□□□ -1.28
RETREG1-201ENST00000306320 KRTAP10-5P60370 271 aa6.98□□□□□ -1.29
RETREG1-201ENST00000306320 MT1XP80297 61 aa6.98□□□□□ -1.29
RETREG1-201ENST00000306320 KRTAP10-12P60413 245 aa6.96□□□□□ -1.29
RETREG1-201ENST00000306320 KRTAP10-7P60409 375 aaPredicted RBP6.96□□□□□ -1.3
RETREG1-201ENST00000306320 KRTAP9-3Q9BYQ3 159 aa6.93□□□□□ -1.3
RETREG1-201ENST00000306320 KRTAP8-1Q8IUC2 63 aa6.92□□□□□ -1.3
RETREG1-201ENST00000306320 KRTAP19-8Q3LI54 63 aa6.91□□□□□ -1.3
RETREG1-201ENST00000306320 LCE2BO14633 110 aa6.84□□□□□ -1.32
RETREG1-201ENST00000306320 KRTAP4-8A0A0G2JLE6 195 aa6.73□□□□□ -1.33
RETREG1-201ENST00000306320 KRTAP4-8Q9BYQ9 185 aa6.73□□□□□ -1.33
RETREG1-201ENST00000306320 KRTAP19-5Q3LI72 72 aa6.63□□□□□ -1.35
RETREG1-201ENST00000306320 LCE2AQ5TA79 106 aaPredicted RBP6.56□□□□□ -1.36
RETREG1-201ENST00000306320 LCE3CQ5T5A8 94 aa6.54□□□□□ -1.36
RETREG1-201ENST00000306320 KRTAP4-7Q9BYR0 210 aa6.52□□□□□ -1.36
RETREG1-201ENST00000306320 SSPOA2VEC9 5147 aa6.52□□□□□ -1.37
RETREG1-201ENST00000306320 KRTAP9-6A8MVA2 160 aa6.44□□□□□ -1.38
RETREG1-201ENST00000306320 MUC12Q9UKN1 5478 aa6.34□□□□□ -1.39
RETREG1-201ENST00000306320 DSTQ03001 7570 aaKnown RBP6.33□□□□□ -1.4
RETREG1-201ENST00000306320 FCGBPQ9Y6R7 5405 aaPredicted RBP6.28□□□□□ -1.4
RETREG1-201ENST00000306320 CRCT1Q9UGL9 99 aa6.28□□□□□ -1.4
RETREG1-201ENST00000306320 KRTAP19-7Q3SYF9 63 aa6.21□□□□□ -1.41
RETREG1-201ENST00000306320 OBSCNQ5VST9 7968 aa6.13□□□□□ -1.43
RETREG1-201ENST00000306320 SYNE1Q8NF91 8797 aaKnown RBP6.13□□□□□ -1.43
RETREG1-201ENST00000306320 KRTAP4-3Q9BYR4 195 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms