RNA–Protein interactions for RNA: ENST00000306320.9

RETREG1-201, Transcript of reticulophagy regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG1, Length 3,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-201ENST00000306320 NDUFAF8A1L188 74 aa9.53□□□□□ -0.88
RETREG1-201ENST00000306320 A0A1B0GVY2 172 aa9.51□□□□□ -0.89
RETREG1-201ENST00000306320 RYR3Q15413 4870 aa9.48□□□□□ -0.89
RETREG1-201ENST00000306320 RPL37P61927 97 aaKnown RBP9.46□□□□□ -0.89
RETREG1-201ENST00000306320 KIAA1109Q2LD37 5005 aa9.45□□□□□ -0.9
RETREG1-201ENST00000306320 PKHD1L1Q86WI1 4243 aa9.44□□□□□ -0.9
RETREG1-201ENST00000306320 KRTAP10-4P60372 401 aaPredicted RBP9.44□□□□□ -0.9
RETREG1-201ENST00000306320 TPRXLQ17RH7 258 aa9.43□□□□□ -0.9
RETREG1-201ENST00000306320 FAT3Q8TDW7 4589 aa9.43□□□□□ -0.9
RETREG1-201ENST00000306320 KRTAP13-4Q3LI77 160 aa9.39□□□□□ -0.91
RETREG1-201ENST00000306320 KRTAP21-3Q3LHN1 58 aa9.36□□□□□ -0.91
RETREG1-201ENST00000306320 Q5VSD8 79 aa9.36□□□□□ -0.91
RETREG1-201ENST00000306320 HSPG2P98160 4391 aa9.35□□□□□ -0.91
RETREG1-201ENST00000306320 KRTAP17-1Q9BYP8 105 aa9.34□□□□□ -0.91
RETREG1-201ENST00000306320 C20orf166-AS1Q96NR2 134 aa9.29□□□□□ -0.92
RETREG1-201ENST00000306320 RYR1P21817 5038 aa9.25□□□□□ -0.93
RETREG1-201ENST00000306320 LPAP08519 4548 aa9.21□□□□□ -0.93
RETREG1-201ENST00000306320 EPPK1P58107 5090 aaKnown RBP9.21□□□□□ -0.93
RETREG1-201ENST00000306320 KRTAP10-6P60371 365 aaPredicted RBP9.21□□□□□ -0.94
RETREG1-201ENST00000306320 RPS29P62273 56 aaKnown RBP9.21□□□□□ -0.94
RETREG1-201ENST00000306320 TNXBP22105 4242 aa9.2□□□□□ -0.94
RETREG1-201ENST00000306320 S4R3F8 94 aa9.18□□□□□ -0.94
RETREG1-201ENST00000306320 KRTAP12-2P59991 146 aa9.16□□□□□ -0.94
RETREG1-201ENST00000306320 LRP2P98164 4655 aa9.13□□□□□ -0.95
RETREG1-201ENST00000306320 KRTAP10-8P60410 259 aa9.11□□□□□ -0.95
RETREG1-201ENST00000306320 KRTAP3-3Q9BYR6 98 aa9.08□□□□□ -0.96
RETREG1-201ENST00000306320 ABCA13Q86UQ4 5058 aa9.05□□□□□ -0.96
RETREG1-201ENST00000306320 XP32Q5T750 250 aa9.05□□□□□ -0.96
RETREG1-201ENST00000306320 KRTAP3-2Q9BYR7 98 aa9.05□□□□□ -0.96
RETREG1-201ENST00000306320 KRTAP15-1Q3LI76 137 aa9.04□□□□□ -0.96
RETREG1-201ENST00000306320 KRTAP4-5Q9BYR2 181 aa8.98□□□□□ -0.97
RETREG1-201ENST00000306320 MT1HL1P0DM35 61 aa8.93□□□□□ -0.98
RETREG1-201ENST00000306320 KRTAP12-1P59990 96 aa8.92□□□□□ -0.98
RETREG1-201ENST00000306320 M0QZ58 72 aa8.82□□□□□ -1
RETREG1-201ENST00000306320 A0A0A0MQY5 61 aa8.79□□□□□ -1
RETREG1-201ENST00000306320 MUC2Q02817 5179 aa8.76□□□□□ -1.01
RETREG1-201ENST00000306320 R4GN34 69 aa8.73□□□□□ -1.01
RETREG1-201ENST00000306320 LUZP6Q538Z0 58 aa8.71□□□□□ -1.01
RETREG1-201ENST00000306320 HERC2O95714 4834 aa8.67□□□□□ -1.02
RETREG1-201ENST00000306320 PLAC4Q8WY50 150 aa8.66□□□□□ -1.02
RETREG1-201ENST00000306320 J3QL48 77 aa8.63□□□□□ -1.03
RETREG1-201ENST00000306320 CAMK2N1Q7Z7J9 78 aa8.49□□□□□ -1.05
RETREG1-201ENST00000306320 HERC1Q15751 4861 aa8.47□□□□□ -1.05
RETREG1-201ENST00000306320 KRTAP4-1Q9BYQ7 146 aa8.47□□□□□ -1.05
RETREG1-201ENST00000306320 LORP23490 312 aaPredicted RBP8.44□□□□□ -1.06
RETREG1-201ENST00000306320 MUC17Q685J3 4493 aa8.33□□□□□ -1.08
RETREG1-201ENST00000306320 SEC61BP60468 96 aaKnown RBP8.32□□□□□ -1.08
RETREG1-201ENST00000306320 FAT4Q6V0I7 4981 aa8.32□□□□□ -1.08
RETREG1-201ENST00000306320 PCLOQ9Y6V0 5065 aa8.28□□□□□ -1.08
RETREG1-201ENST00000306320 RNF213Q63HN8 5207 aa8.25□□□□□ -1.09
RETREG1-201ENST00000306320 BIRC6Q9NR09 4857 aa8.18□□□□□ -1.1
RETREG1-201ENST00000306320 UBR4Q5T4S7 5183 aa8.06□□□□□ -1.12
RETREG1-201ENST00000306320 PP632Q6XCG6 107 aa8□□□□□ -1.13
RETREG1-201ENST00000306320 HMCN2Q8NDA2 5059 aa7.99□□□□□ -1.13
RETREG1-201ENST00000306320 KRTAP19-2Q3LHN2 52 aa7.97□□□□□ -1.13
RETREG1-201ENST00000306320 TNP1P09430 55 aa7.94□□□□□ -1.14
RETREG1-201ENST00000306320 M0R2T5 61 aa7.9□□□□□ -1.14
RETREG1-201ENST00000306320 FLGP20930 4061 aaPredicted RBP7.87□□□□□ -1.15
RETREG1-201ENST00000306320 LCE2CQ5TA81 110 aa7.64□□□□□ -1.19
RETREG1-201ENST00000306320 KRTAP10-10P60014 251 aa7.56□□□□□ -1.2
RETREG1-201ENST00000306320 MT1HP80294 61 aa7.51□□□□□ -1.21
RETREG1-201ENST00000306320 LCE3AQ5TA76 89 aa7.49□□□□□ -1.21
RETREG1-201ENST00000306320 SPRR5A0A1B0GTR4 108 aa7.44□□□□□ -1.22
RETREG1-201ENST00000306320 MT1FP04733 61 aa7.44□□□□□ -1.22
RETREG1-201ENST00000306320 KRTAP19-1Q8IUB9 90 aa7.43□□□□□ -1.22
RETREG1-201ENST00000306320 USH2AO75445 5202 aa7.39□□□□□ -1.23
RETREG1-201ENST00000306320 MT2AP02795 61 aa7.37□□□□□ -1.23
RETREG1-201ENST00000306320 PRO2289Q9P1D8 64 aa7.34□□□□□ -1.23
RETREG1-201ENST00000306320 KRTAP9-8Q9BYQ0 159 aa7.27□□□□□ -1.25
RETREG1-201ENST00000306320 SPRR2GQ9BYE4 73 aa7.27□□□□□ -1.25
RETREG1-201ENST00000306320 KRTAP23-1A1A580 65 aa7.23□□□□□ -1.25
RETREG1-201ENST00000306320 KMT2DO14686 5537 aa7.18□□□□□ -1.26
RETREG1-201ENST00000306320 FSIP2Q5CZC0 6907 aa7.13□□□□□ -1.27
RETREG1-201ENST00000306320 INE1O15225 51 aa7.08□□□□□ -1.28
RETREG1-201ENST00000306320 MT1BP07438 61 aa7.05□□□□□ -1.28
RETREG1-201ENST00000306320 KRTAP12-3P60328 96 aa7.05□□□□□ -1.28
RETREG1-201ENST00000306320 KRTAP10-5P60370 271 aa6.98□□□□□ -1.29
RETREG1-201ENST00000306320 MT1XP80297 61 aa6.98□□□□□ -1.29
RETREG1-201ENST00000306320 KRTAP10-12P60413 245 aa6.96□□□□□ -1.29
RETREG1-201ENST00000306320 KRTAP10-7P60409 375 aaPredicted RBP6.96□□□□□ -1.3
RETREG1-201ENST00000306320 KRTAP9-3Q9BYQ3 159 aa6.93□□□□□ -1.3
RETREG1-201ENST00000306320 KRTAP8-1Q8IUC2 63 aa6.92□□□□□ -1.3
RETREG1-201ENST00000306320 KRTAP19-8Q3LI54 63 aa6.91□□□□□ -1.3
RETREG1-201ENST00000306320 LCE2BO14633 110 aa6.84□□□□□ -1.32
RETREG1-201ENST00000306320 KRTAP4-8A0A0G2JLE6 195 aa6.73□□□□□ -1.33
RETREG1-201ENST00000306320 KRTAP4-8Q9BYQ9 185 aa6.73□□□□□ -1.33
RETREG1-201ENST00000306320 KRTAP19-5Q3LI72 72 aa6.63□□□□□ -1.35
RETREG1-201ENST00000306320 LCE2AQ5TA79 106 aaPredicted RBP6.56□□□□□ -1.36
RETREG1-201ENST00000306320 LCE3CQ5T5A8 94 aa6.54□□□□□ -1.36
RETREG1-201ENST00000306320 KRTAP4-7Q9BYR0 210 aa6.52□□□□□ -1.36
RETREG1-201ENST00000306320 SSPOA2VEC9 5147 aa6.52□□□□□ -1.37
RETREG1-201ENST00000306320 KRTAP9-6A8MVA2 160 aa6.44□□□□□ -1.38
RETREG1-201ENST00000306320 MUC12Q9UKN1 5478 aa6.34□□□□□ -1.39
RETREG1-201ENST00000306320 DSTQ03001 7570 aaKnown RBP6.33□□□□□ -1.4
RETREG1-201ENST00000306320 FCGBPQ9Y6R7 5405 aaPredicted RBP6.28□□□□□ -1.4
RETREG1-201ENST00000306320 CRCT1Q9UGL9 99 aa6.28□□□□□ -1.4
RETREG1-201ENST00000306320 KRTAP19-7Q3SYF9 63 aa6.21□□□□□ -1.41
RETREG1-201ENST00000306320 OBSCNQ5VST9 7968 aa6.13□□□□□ -1.43
RETREG1-201ENST00000306320 SYNE1Q8NF91 8797 aaKnown RBP6.13□□□□□ -1.43
RETREG1-201ENST00000306320 KRTAP4-3Q9BYR4 195 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms