RNA–Protein interactions for RNA: ENST00000304623.12

CTNND2-201, Transcript of catenin delta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND2, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND2-201ENST00000304623 KRTAP4-1Q9BYQ7 146 aa7.8□□□□□ -1.16
CTNND2-201ENST00000304623 SPRR2GQ9BYE4 73 aa7.78□□□□□ -1.16
CTNND2-201ENST00000304623 SPENQ96T58 3664 aaKnown RBP7.76□□□□□ -1.17
CTNND2-201ENST00000304623 DNAH5Q8TE73 4624 aa7.75□□□□□ -1.17
CTNND2-201ENST00000304623 DNAH10Q8IVF4 4471 aa7.75□□□□□ -1.17
CTNND2-201ENST00000304623 DNAH2Q9P225 4427 aa7.75□□□□□ -1.17
CTNND2-201ENST00000304623 MT1HP80294 61 aa7.74□□□□□ -1.17
CTNND2-201ENST00000304623 MT2AP02795 61 aa7.7□□□□□ -1.18
CTNND2-201ENST00000304623 DNAH11Q96DT5 4516 aa7.69□□□□□ -1.18
CTNND2-201ENST00000304623 PLECQ15149 4684 aaKnown RBP7.62□□□□□ -1.19
CTNND2-201ENST00000304623 DNAH9Q9NYC9 4486 aa7.6□□□□□ -1.19
CTNND2-201ENST00000304623 KRTAP19-5Q3LI72 72 aa7.57□□□□□ -1.2
CTNND2-201ENST00000304623 LCE3CQ5T5A8 94 aa7.56□□□□□ -1.2
CTNND2-201ENST00000304623 KRTAP19-4Q3LI73 84 aa7.54□□□□□ -1.2
CTNND2-201ENST00000304623 DNAH1Q9P2D7 4330 aa7.54□□□□□ -1.2
CTNND2-201ENST00000304623 MT1FP04733 61 aa7.51□□□□□ -1.21
CTNND2-201ENST00000304623 FAT1Q14517 4588 aa7.5□□□□□ -1.21
CTNND2-201ENST00000304623 KRTAP10-7P60409 375 aaPredicted RBP7.48□□□□□ -1.21
CTNND2-201ENST00000304623 DNAH17Q9UFH2 4485 aa7.42□□□□□ -1.22
CTNND2-201ENST00000304623 VPS13CQ709C8 3753 aa7.4□□□□□ -1.23
CTNND2-201ENST00000304623 SPRR2FQ96RM1 72 aa7.38□□□□□ -1.23
CTNND2-201ENST00000304623 CSMD3Q7Z407 3707 aa7.37□□□□□ -1.23
CTNND2-201ENST00000304623 BSNQ9UPA5 3926 aa7.33□□□□□ -1.24
CTNND2-201ENST00000304623 VPS13DQ5THJ4 4388 aa7.29□□□□□ -1.24
CTNND2-201ENST00000304623 DYNC1H1Q14204 4646 aaKnown RBP7.27□□□□□ -1.25
CTNND2-201ENST00000304623 DNAH8Q96JB1 4490 aa7.25□□□□□ -1.25
CTNND2-201ENST00000304623 SACSQ9NZJ4 4579 aa7.23□□□□□ -1.25
CTNND2-201ENST00000304623 KRTAP19-8Q3LI54 63 aa7.19□□□□□ -1.26
CTNND2-201ENST00000304623 LRP1BQ9NZR2 4599 aa7.17□□□□□ -1.26
CTNND2-201ENST00000304623 KRTAP19-1Q8IUB9 90 aa7.11□□□□□ -1.27
CTNND2-201ENST00000304623 DYNC2H1Q8NCM8 4307 aaKnown RBP7.07□□□□□ -1.28
CTNND2-201ENST00000304623 FAT2Q9NYQ8 4349 aa7.07□□□□□ -1.28
CTNND2-201ENST00000304623 RYR1P21817 5038 aa7.06□□□□□ -1.28
CTNND2-201ENST00000304623 AKAP9Q99996 3911 aa7.05□□□□□ -1.28
CTNND2-201ENST00000304623 APOBP04114 4563 aaKnown RBP7.02□□□□□ -1.29
CTNND2-201ENST00000304623 DNAH3Q8TD57 4116 aa7.02□□□□□ -1.29
CTNND2-201ENST00000304623 MT1XP80297 61 aa6.99□□□□□ -1.29
CTNND2-201ENST00000304623 SPRR5A0A1B0GTR4 108 aa6.96□□□□□ -1.3
CTNND2-201ENST00000304623 LCE3BQ5TA77 95 aa6.96□□□□□ -1.3
CTNND2-201ENST00000304623 KRTAP12-4P60329 112 aa6.96□□□□□ -1.3
CTNND2-201ENST00000304623 LRP1Q07954 4544 aaKnown RBP6.94□□□□□ -1.3
CTNND2-201ENST00000304623 DNHD1Q96M86 4753 aa6.94□□□□□ -1.3
CTNND2-201ENST00000304623 STARD9Q9P2P6 4700 aa6.88□□□□□ -1.31
CTNND2-201ENST00000304623 SPRR2EP22531 72 aa6.87□□□□□ -1.31
CTNND2-201ENST00000304623 SPRR2BP35325 72 aa6.87□□□□□ -1.31
CTNND2-201ENST00000304623 SPRR2AP35326 72 aa6.87□□□□□ -1.31
CTNND2-201ENST00000304623 MT1BP07438 61 aa6.86□□□□□ -1.31
CTNND2-201ENST00000304623 MT1GP13640 62 aa6.86□□□□□ -1.31
CTNND2-201ENST00000304623 ZNF469Q96JG9 3925 aaPredicted RBP6.81□□□□□ -1.32
CTNND2-201ENST00000304623 FAT3Q8TDW7 4589 aa6.8□□□□□ -1.32
CTNND2-201ENST00000304623 ANK2Q01484 3957 aa6.77□□□□□ -1.33
CTNND2-201ENST00000304623 KRTAP9-8Q9BYQ0 159 aa6.72□□□□□ -1.33
CTNND2-201ENST00000304623 RYR3Q15413 4870 aa6.72□□□□□ -1.33
CTNND2-201ENST00000304623 LCE3DQ9BYE3 92 aa6.7□□□□□ -1.34
CTNND2-201ENST00000304623 VPS13BQ7Z7G8 4022 aa6.68□□□□□ -1.34
CTNND2-201ENST00000304623 LCE2BO14633 110 aa6.67□□□□□ -1.34
CTNND2-201ENST00000304623 HERC1Q15751 4861 aa6.67□□□□□ -1.34
CTNND2-201ENST00000304623 SPRR2DP22532 72 aa6.66□□□□□ -1.34
CTNND2-201ENST00000304623 KRTAP4-8A0A0G2JLE6 195 aa6.66□□□□□ -1.34
CTNND2-201ENST00000304623 KRTAP4-8Q9BYQ9 185 aa6.66□□□□□ -1.34
CTNND2-201ENST00000304623 CMYA5Q8N3K9 4069 aa6.65□□□□□ -1.35
CTNND2-201ENST00000304623 LCE3EQ5T5B0 92 aa6.62□□□□□ -1.35
CTNND2-201ENST00000304623 KRTAP17-1Q9BYP8 105 aa6.62□□□□□ -1.35
CTNND2-201ENST00000304623 PRKDCP78527 4128 aaKnown RBP6.61□□□□□ -1.35
CTNND2-201ENST00000304623 KRTAP9-3Q9BYQ3 159 aa6.6□□□□□ -1.35
CTNND2-201ENST00000304623 MYCBP2O75592 4640 aa6.58□□□□□ -1.36
CTNND2-201ENST00000304623 DNAH6Q9C0G6 4158 aa6.56□□□□□ -1.36
CTNND2-201ENST00000304623 HSPG2P98160 4391 aa6.56□□□□□ -1.36
CTNND2-201ENST00000304623 DNAH7Q8WXX0 4024 aa6.55□□□□□ -1.36
CTNND2-201ENST00000304623 RYR2Q92736 4967 aa6.53□□□□□ -1.36
CTNND2-201ENST00000304623 LCE2CQ5TA81 110 aa6.52□□□□□ -1.37
CTNND2-201ENST00000304623 KMT2AQ03164 3969 aa6.48□□□□□ -1.37
CTNND2-201ENST00000304623 KRTAP19-3Q7Z4W3 81 aa6.44□□□□□ -1.38
CTNND2-201ENST00000304623 MT1LQ93083 61 aa6.44□□□□□ -1.38
CTNND2-201ENST00000304623 KIAA1109Q2LD37 5005 aa6.41□□□□□ -1.38
CTNND2-201ENST00000304623 PKD1P98161 4303 aa6.4□□□□□ -1.39
CTNND2-201ENST00000304623 LYSTQ99698 3801 aa6.37□□□□□ -1.39
CTNND2-201ENST00000304623 KRTAP4-7Q9BYR0 210 aa6.33□□□□□ -1.4
CTNND2-201ENST00000304623 MT1EP04732 61 aa6.32□□□□□ -1.4
CTNND2-201ENST00000304623 FRAS1Q86XX4 4008 aa6.27□□□□□ -1.41
CTNND2-201ENST00000304623 HECTD4Q9Y4D8 3996 aa6.2□□□□□ -1.42
CTNND2-201ENST00000304623 MT3P25713 68 aa6.15□□□□□ -1.42
CTNND2-201ENST00000304623 KRTAP19-2Q3LHN2 52 aa6.15□□□□□ -1.43
CTNND2-201ENST00000304623 MT1MQ8N339 61 aa6.14□□□□□ -1.43
CTNND2-201ENST00000304623 HERC2O95714 4834 aa6.12□□□□□ -1.43
CTNND2-201ENST00000304623 PRM1P04553 51 aa6.11□□□□□ -1.43
CTNND2-201ENST00000304623 LCE2DQ5TA82 110 aaPredicted RBP6.11□□□□□ -1.43
CTNND2-201ENST00000304623 LRP2P98164 4655 aa6.09□□□□□ -1.43
CTNND2-201ENST00000304623 PKHD1L1Q86WI1 4243 aa6.08□□□□□ -1.44
CTNND2-201ENST00000304623 PCLOQ9Y6V0 5065 aa6.06□□□□□ -1.44
CTNND2-201ENST00000304623 BIRC6Q9NR09 4857 aa5.95□□□□□ -1.46
CTNND2-201ENST00000304623 LOC100996750A0A140TA64 210 aa5.95□□□□□ -1.46
CTNND2-201ENST00000304623 MUC17Q685J3 4493 aa5.94□□□□□ -1.46
CTNND2-201ENST00000304623 KRTAP19-6Q3LI70 58 aa5.94□□□□□ -1.46
CTNND2-201ENST00000304623 KMT2CQ8NEZ4 4911 aaKnown RBP5.94□□□□□ -1.46
CTNND2-201ENST00000304623 KRTAP4-3Q9BYR4 195 aa5.86□□□□□ -1.47
CTNND2-201ENST00000304623 FLGP20930 4061 aaPredicted RBP5.86□□□□□ -1.47
CTNND2-201ENST00000304623 MT4P47944 62 aa5.85□□□□□ -1.47
CTNND2-201ENST00000304623 EPPK1P58107 5090 aaKnown RBP5.84□□□□□ -1.47
CTNND2-201ENST00000304623 LPAP08519 4548 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms