RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 KRTAP23-1A1A580 65 aa5.95□□□□□ -1.46
PRKCB-201ENST00000303531 CSMD3Q7Z407 3707 aa5.92□□□□□ -1.46
PRKCB-201ENST00000303531 DNAH9Q9NYC9 4486 aa5.82□□□□□ -1.48
PRKCB-201ENST00000303531 DNAH5Q8TE73 4624 aa5.79□□□□□ -1.48
PRKCB-201ENST00000303531 DNAH1Q9P2D7 4330 aa5.75□□□□□ -1.49
PRKCB-201ENST00000303531 AKAP9Q99996 3911 aa5.7□□□□□ -1.5
PRKCB-201ENST00000303531 DNAH10Q8IVF4 4471 aa5.7□□□□□ -1.5
PRKCB-201ENST00000303531 ZNF469Q96JG9 3925 aaPredicted RBP5.69□□□□□ -1.5
PRKCB-201ENST00000303531 KRTAP4-1Q9BYQ7 146 aa5.67□□□□□ -1.5
PRKCB-201ENST00000303531 PLECQ15149 4684 aaKnown RBP5.65□□□□□ -1.51
PRKCB-201ENST00000303531 KRTAP8-1Q8IUC2 63 aa5.65□□□□□ -1.51
PRKCB-201ENST00000303531 DNAH11Q96DT5 4516 aa5.63□□□□□ -1.51
PRKCB-201ENST00000303531 KRTAP10-5P60370 271 aa5.63□□□□□ -1.51
PRKCB-201ENST00000303531 DNAH2Q9P225 4427 aa5.57□□□□□ -1.52
PRKCB-201ENST00000303531 MT1HP80294 61 aa5.56□□□□□ -1.52
PRKCB-201ENST00000303531 DNAH17Q9UFH2 4485 aa5.56□□□□□ -1.52
PRKCB-201ENST00000303531 VPS13DQ5THJ4 4388 aa5.53□□□□□ -1.52
PRKCB-201ENST00000303531 MT2AP02795 61 aa5.5□□□□□ -1.53
PRKCB-201ENST00000303531 SPRR2GQ9BYE4 73 aa5.49□□□□□ -1.53
PRKCB-201ENST00000303531 FAT1Q14517 4588 aa5.47□□□□□ -1.53
PRKCB-201ENST00000303531 DYNC1H1Q14204 4646 aaKnown RBP5.45□□□□□ -1.54
PRKCB-201ENST00000303531 LRP1BQ9NZR2 4599 aa5.44□□□□□ -1.54
PRKCB-201ENST00000303531 DNAH3Q8TD57 4116 aa5.41□□□□□ -1.54
PRKCB-201ENST00000303531 DNAH8Q96JB1 4490 aa5.4□□□□□ -1.54
PRKCB-201ENST00000303531 DNHD1Q96M86 4753 aa5.4□□□□□ -1.55
PRKCB-201ENST00000303531 MT1FP04733 61 aa5.4□□□□□ -1.55
PRKCB-201ENST00000303531 STARD9Q9P2P6 4700 aa5.38□□□□□ -1.55
PRKCB-201ENST00000303531 SACSQ9NZJ4 4579 aa5.37□□□□□ -1.55
PRKCB-201ENST00000303531 FAT2Q9NYQ8 4349 aa5.37□□□□□ -1.55
PRKCB-201ENST00000303531 DYNC2H1Q8NCM8 4307 aaKnown RBP5.35□□□□□ -1.55
PRKCB-201ENST00000303531 KRTAP19-5Q3LI72 72 aa5.34□□□□□ -1.55
PRKCB-201ENST00000303531 ANK2Q01484 3957 aa5.32□□□□□ -1.56
PRKCB-201ENST00000303531 RYR1P21817 5038 aa5.31□□□□□ -1.56
PRKCB-201ENST00000303531 LCE3CQ5T5A8 94 aa5.27□□□□□ -1.57
PRKCB-201ENST00000303531 APOBP04114 4563 aaKnown RBP5.24□□□□□ -1.57
PRKCB-201ENST00000303531 SPRR2FQ96RM1 72 aa5.24□□□□□ -1.57
PRKCB-201ENST00000303531 VPS13BQ7Z7G8 4022 aa5.22□□□□□ -1.57
PRKCB-201ENST00000303531 KMT2AQ03164 3969 aa5.21□□□□□ -1.58
PRKCB-201ENST00000303531 KRTAP10-7P60409 375 aaPredicted RBP5.2□□□□□ -1.58
PRKCB-201ENST00000303531 PRKDCP78527 4128 aaKnown RBP5.18□□□□□ -1.58
PRKCB-201ENST00000303531 LYSTQ99698 3801 aa5.14□□□□□ -1.59
PRKCB-201ENST00000303531 KRTAP19-1Q8IUB9 90 aa5.09□□□□□ -1.59
PRKCB-201ENST00000303531 KRTAP19-4Q3LI73 84 aa5.08□□□□□ -1.6
PRKCB-201ENST00000303531 FRAS1Q86XX4 4008 aa5.08□□□□□ -1.6
PRKCB-201ENST00000303531 KRTAP19-8Q3LI54 63 aa5.07□□□□□ -1.6
PRKCB-201ENST00000303531 MYCBP2O75592 4640 aa5.06□□□□□ -1.6
PRKCB-201ENST00000303531 RYR3Q15413 4870 aa5.06□□□□□ -1.6
PRKCB-201ENST00000303531 DNAH7Q8WXX0 4024 aa5.05□□□□□ -1.6
PRKCB-201ENST00000303531 KRTAP17-1Q9BYP8 105 aa5.04□□□□□ -1.6
PRKCB-201ENST00000303531 FAT3Q8TDW7 4589 aa5□□□□□ -1.61
PRKCB-201ENST00000303531 DNAH6Q9C0G6 4158 aa5□□□□□ -1.61
PRKCB-201ENST00000303531 MT1XP80297 61 aa4.99□□□□□ -1.61
PRKCB-201ENST00000303531 CMYA5Q8N3K9 4069 aa4.98□□□□□ -1.61
PRKCB-201ENST00000303531 HECTD4Q9Y4D8 3996 aa4.93□□□□□ -1.62
PRKCB-201ENST00000303531 LRP1Q07954 4544 aaKnown RBP4.92□□□□□ -1.62
PRKCB-201ENST00000303531 MT1BP07438 61 aa4.91□□□□□ -1.62
PRKCB-201ENST00000303531 KIAA1109Q2LD37 5005 aa4.91□□□□□ -1.62
PRKCB-201ENST00000303531 LCE3BQ5TA77 95 aa4.9□□□□□ -1.62
PRKCB-201ENST00000303531 SPRR2EP22531 72 aa4.88□□□□□ -1.63
PRKCB-201ENST00000303531 SPRR2BP35325 72 aa4.88□□□□□ -1.63
PRKCB-201ENST00000303531 SPRR2AP35326 72 aa4.88□□□□□ -1.63
PRKCB-201ENST00000303531 KRTAP9-8Q9BYQ0 159 aa4.86□□□□□ -1.63
PRKCB-201ENST00000303531 RYR2Q92736 4967 aa4.86□□□□□ -1.63
PRKCB-201ENST00000303531 MT1GP13640 62 aa4.86□□□□□ -1.63
PRKCB-201ENST00000303531 KRTAP4-8A0A0G2JLE6 195 aa4.82□□□□□ -1.64
PRKCB-201ENST00000303531 KRTAP4-8Q9BYQ9 185 aa4.82□□□□□ -1.64
PRKCB-201ENST00000303531 KRTAP12-4P60329 112 aa4.8□□□□□ -1.64
PRKCB-201ENST00000303531 SPRR5A0A1B0GTR4 108 aa4.79□□□□□ -1.64
PRKCB-201ENST00000303531 LCE2CQ5TA81 110 aa4.76□□□□□ -1.65
PRKCB-201ENST00000303531 KRTAP9-3Q9BYQ3 159 aa4.75□□□□□ -1.65
PRKCB-201ENST00000303531 SPRR2DP22532 72 aa4.71□□□□□ -1.65
PRKCB-201ENST00000303531 PKD1P98161 4303 aa4.71□□□□□ -1.66
PRKCB-201ENST00000303531 LCE2BO14633 110 aa4.71□□□□□ -1.66
PRKCB-201ENST00000303531 HSPG2P98160 4391 aa4.7□□□□□ -1.66
PRKCB-201ENST00000303531 LRP2P98164 4655 aa4.69□□□□□ -1.66
PRKCB-201ENST00000303531 HERC1Q15751 4861 aa4.69□□□□□ -1.66
PRKCB-201ENST00000303531 HERC2O95714 4834 aa4.65□□□□□ -1.67
PRKCB-201ENST00000303531 HYDINQ4G0P3 5121 aa4.63□□□□□ -1.67
PRKCB-201ENST00000303531 LCE3DQ9BYE3 92 aa4.62□□□□□ -1.67
PRKCB-201ENST00000303531 LPAP08519 4548 aa4.61□□□□□ -1.67
PRKCB-201ENST00000303531 PKHD1P08F94 4074 aa4.59□□□□□ -1.67
PRKCB-201ENST00000303531 PKHD1L1Q86WI1 4243 aa4.58□□□□□ -1.68
PRKCB-201ENST00000303531 KRTAP4-7Q9BYR0 210 aa4.57□□□□□ -1.68
PRKCB-201ENST00000303531 PCLOQ9Y6V0 5065 aa4.57□□□□□ -1.68
PRKCB-201ENST00000303531 KRTAP19-3Q7Z4W3 81 aa4.54□□□□□ -1.68
PRKCB-201ENST00000303531 LCE3EQ5T5B0 92 aa4.54□□□□□ -1.68
PRKCB-201ENST00000303531 MT1LQ93083 61 aa4.53□□□□□ -1.68
PRKCB-201ENST00000303531 KRTAP19-2Q3LHN2 52 aa4.52□□□□□ -1.69
PRKCB-201ENST00000303531 BIRC6Q9NR09 4857 aa4.5□□□□□ -1.69
PRKCB-201ENST00000303531 MT1EP04732 61 aa4.49□□□□□ -1.69
PRKCB-201ENST00000303531 TNXBP22105 4242 aa4.46□□□□□ -1.7
PRKCB-201ENST00000303531 KMT2CQ8NEZ4 4911 aaKnown RBP4.46□□□□□ -1.7
PRKCB-201ENST00000303531 FLGP20930 4061 aaPredicted RBP4.44□□□□□ -1.7
PRKCB-201ENST00000303531 MUC17Q685J3 4493 aa4.39□□□□□ -1.71
PRKCB-201ENST00000303531 MT1MQ8N339 61 aa4.35□□□□□ -1.71
PRKCB-201ENST00000303531 LOC100996750A0A140TA64 210 aa4.31□□□□□ -1.72
PRKCB-201ENST00000303531 LCE2DQ5TA82 110 aaPredicted RBP4.31□□□□□ -1.72
PRKCB-201ENST00000303531 EPPK1P58107 5090 aaKnown RBP4.28□□□□□ -1.72
PRKCB-201ENST00000303531 KRTAP4-3Q9BYR4 195 aa4.26□□□□□ -1.73
PRKCB-201ENST00000303531 KRTAP19-6Q3LI70 58 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms