RNA–Protein interactions for RNA: ENST00000302118.5

PCSK9-201, Transcript of proprotein convertase subtilisin/kexin type 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCSK9, Length 3,637 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9-201ENST00000302118 H0YAA0 97 aa6.46□□□□□ -1.38
PCSK9-201ENST00000302118 H1FX-AS1Q4G0G2 97 aa6.44□□□□□ -1.38
PCSK9-201ENST00000302118 P0C880 135 aa6.43□□□□□ -1.38
PCSK9-201ENST00000302118 RPS29P62273 56 aaKnown RBP6.43□□□□□ -1.38
PCSK9-201ENST00000302118 APOBP04114 4563 aaKnown RBP6.42□□□□□ -1.38
PCSK9-201ENST00000302118 RYR2Q92736 4967 aa6.39□□□□□ -1.39
PCSK9-201ENST00000302118 KRTAP10-4P60372 401 aaPredicted RBP6.38□□□□□ -1.39
PCSK9-201ENST00000302118 FAT3Q8TDW7 4589 aa6.38□□□□□ -1.39
PCSK9-201ENST00000302118 S4R3F8 94 aa6.36□□□□□ -1.39
PCSK9-201ENST00000302118 KIAA1109Q2LD37 5005 aa6.35□□□□□ -1.39
PCSK9-201ENST00000302118 C10orf95Q9H7T3 257 aa6.35□□□□□ -1.39
PCSK9-201ENST00000302118 KRTAP10-8P60410 259 aa6.34□□□□□ -1.39
PCSK9-201ENST00000302118 XP32Q5T750 250 aa6.33□□□□□ -1.4
PCSK9-201ENST00000302118 LUZP6Q538Z0 58 aa6.32□□□□□ -1.4
PCSK9-201ENST00000302118 RYR3Q15413 4870 aa6.3□□□□□ -1.4
PCSK9-201ENST00000302118 RPL37P61927 97 aaKnown RBP6.3□□□□□ -1.4
PCSK9-201ENST00000302118 KRTAP17-1Q9BYP8 105 aa6.27□□□□□ -1.4
PCSK9-201ENST00000302118 J3QL48 77 aa6.21□□□□□ -1.42
PCSK9-201ENST00000302118 RYR1P21817 5038 aa6.2□□□□□ -1.42
PCSK9-201ENST00000302118 PKHD1L1Q86WI1 4243 aa6.2□□□□□ -1.42
PCSK9-201ENST00000302118 KRTAP13-4Q3LI77 160 aa6.2□□□□□ -1.42
PCSK9-201ENST00000302118 HSPG2P98160 4391 aa6.17□□□□□ -1.42
PCSK9-201ENST00000302118 KRTAP4-5Q9BYR2 181 aa6.16□□□□□ -1.42
PCSK9-201ENST00000302118 TPRXLQ17RH7 258 aa6.16□□□□□ -1.42
PCSK9-201ENST00000302118 EPPK1P58107 5090 aaKnown RBP6.14□□□□□ -1.43
PCSK9-201ENST00000302118 KRTAP3-3Q9BYR6 98 aa6.14□□□□□ -1.43
PCSK9-201ENST00000302118 KRTAP10-6P60371 365 aaPredicted RBP6.13□□□□□ -1.43
PCSK9-201ENST00000302118 LRP2P98164 4655 aa6.12□□□□□ -1.43
PCSK9-201ENST00000302118 M0QZ58 72 aa6.1□□□□□ -1.43
PCSK9-201ENST00000302118 MT1HL1P0DM35 61 aa6.09□□□□□ -1.43
PCSK9-201ENST00000302118 R4GN34 69 aa6.07□□□□□ -1.44
PCSK9-201ENST00000302118 SEC61BP60468 96 aaKnown RBP6.05□□□□□ -1.44
PCSK9-201ENST00000302118 KRTAP3-2Q9BYR7 98 aa6.05□□□□□ -1.44
PCSK9-201ENST00000302118 KRTAP12-2P59991 146 aa6.04□□□□□ -1.44
PCSK9-201ENST00000302118 TNXBP22105 4242 aa6.03□□□□□ -1.44
PCSK9-201ENST00000302118 LPAP08519 4548 aa6.02□□□□□ -1.45
PCSK9-201ENST00000302118 KRTAP15-1Q3LI76 137 aa5.97□□□□□ -1.45
PCSK9-201ENST00000302118 ABCA13Q86UQ4 5058 aa5.93□□□□□ -1.46
PCSK9-201ENST00000302118 KRTAP12-1P59990 96 aa5.91□□□□□ -1.46
PCSK9-201ENST00000302118 CAMK2N1Q7Z7J9 78 aa5.9□□□□□ -1.46
PCSK9-201ENST00000302118 HERC2O95714 4834 aa5.86□□□□□ -1.47
PCSK9-201ENST00000302118 MUC2Q02817 5179 aa5.82□□□□□ -1.48
PCSK9-201ENST00000302118 LORP23490 312 aaPredicted RBP5.81□□□□□ -1.48
PCSK9-201ENST00000302118 M0R2T5 61 aa5.77□□□□□ -1.49
PCSK9-201ENST00000302118 KRTAP4-1Q9BYQ7 146 aa5.76□□□□□ -1.49
PCSK9-201ENST00000302118 PLAC4Q8WY50 150 aa5.76□□□□□ -1.49
PCSK9-201ENST00000302118 HERC1Q15751 4861 aa5.66□□□□□ -1.5
PCSK9-201ENST00000302118 BIRC6Q9NR09 4857 aa5.6□□□□□ -1.51
PCSK9-201ENST00000302118 PCLOQ9Y6V0 5065 aa5.55□□□□□ -1.52
PCSK9-201ENST00000302118 FAT4Q6V0I7 4981 aa5.54□□□□□ -1.52
PCSK9-201ENST00000302118 RNF213Q63HN8 5207 aa5.49□□□□□ -1.53
PCSK9-201ENST00000302118 MUC17Q685J3 4493 aa5.48□□□□□ -1.53
PCSK9-201ENST00000302118 TNP1P09430 55 aa5.43□□□□□ -1.54
PCSK9-201ENST00000302118 KRTAP10-10P60014 251 aa5.41□□□□□ -1.54
PCSK9-201ENST00000302118 UBR4Q5T4S7 5183 aa5.37□□□□□ -1.55
PCSK9-201ENST00000302118 HMCN2Q8NDA2 5059 aa5.33□□□□□ -1.56
PCSK9-201ENST00000302118 KRTAP19-2Q3LHN2 52 aa5.33□□□□□ -1.56
PCSK9-201ENST00000302118 PP632Q6XCG6 107 aa5.28□□□□□ -1.56
PCSK9-201ENST00000302118 PRO2289Q9P1D8 64 aa5.26□□□□□ -1.57
PCSK9-201ENST00000302118 FLGP20930 4061 aaPredicted RBP5.2□□□□□ -1.58
PCSK9-201ENST00000302118 LCE2CQ5TA81 110 aa5.17□□□□□ -1.58
PCSK9-201ENST00000302118 MT1HP80294 61 aa5.14□□□□□ -1.59
PCSK9-201ENST00000302118 MT1FP04733 61 aa5.11□□□□□ -1.59
PCSK9-201ENST00000302118 LCE3AQ5TA76 89 aa5.1□□□□□ -1.59
PCSK9-201ENST00000302118 KRTAP19-1Q8IUB9 90 aa5.09□□□□□ -1.59
PCSK9-201ENST00000302118 MT2AP02795 61 aa5.07□□□□□ -1.6
PCSK9-201ENST00000302118 SPRR2GQ9BYE4 73 aa5.01□□□□□ -1.61
PCSK9-201ENST00000302118 INE1O15225 51 aa4.97□□□□□ -1.61
PCSK9-201ENST00000302118 FSIP2Q5CZC0 6907 aa4.97□□□□□ -1.61
PCSK9-201ENST00000302118 USH2AO75445 5202 aa4.94□□□□□ -1.62
PCSK9-201ENST00000302118 KRTAP9-8Q9BYQ0 159 aa4.93□□□□□ -1.62
PCSK9-201ENST00000302118 KRTAP10-12P60413 245 aa4.89□□□□□ -1.63
PCSK9-201ENST00000302118 KRTAP12-3P60328 96 aa4.85□□□□□ -1.63
PCSK9-201ENST00000302118 SPRR5A0A1B0GTR4 108 aa4.84□□□□□ -1.63
PCSK9-201ENST00000302118 KRTAP23-1A1A580 65 aa4.84□□□□□ -1.63
PCSK9-201ENST00000302118 MT1BP07438 61 aa4.82□□□□□ -1.64
PCSK9-201ENST00000302118 KRTAP10-7P60409 375 aaPredicted RBP4.82□□□□□ -1.64
PCSK9-201ENST00000302118 KMT2DO14686 5537 aa4.82□□□□□ -1.64
PCSK9-201ENST00000302118 MT1XP80297 61 aa4.8□□□□□ -1.64
PCSK9-201ENST00000302118 KRTAP10-5P60370 271 aa4.79□□□□□ -1.64
PCSK9-201ENST00000302118 KRTAP19-8Q3LI54 63 aa4.72□□□□□ -1.65
PCSK9-201ENST00000302118 KRTAP9-3Q9BYQ3 159 aa4.72□□□□□ -1.65
PCSK9-201ENST00000302118 KRTAP8-1Q8IUC2 63 aa4.69□□□□□ -1.66
PCSK9-201ENST00000302118 KRTAP4-8A0A0G2JLE6 195 aa4.67□□□□□ -1.66
PCSK9-201ENST00000302118 KRTAP4-8Q9BYQ9 185 aa4.67□□□□□ -1.66
PCSK9-201ENST00000302118 LCE2BO14633 110 aa4.65□□□□□ -1.67
PCSK9-201ENST00000302118 KRTAP19-5Q3LI72 72 aa4.64□□□□□ -1.67
PCSK9-201ENST00000302118 LCE2AQ5TA79 106 aaPredicted RBP4.55□□□□□ -1.68
PCSK9-201ENST00000302118 KRTAP4-7Q9BYR0 210 aa4.51□□□□□ -1.69
PCSK9-201ENST00000302118 CRCT1Q9UGL9 99 aa4.49□□□□□ -1.69
PCSK9-201ENST00000302118 DSTQ03001 7570 aaKnown RBP4.48□□□□□ -1.69
PCSK9-201ENST00000302118 LCE3CQ5T5A8 94 aa4.44□□□□□ -1.7
PCSK9-201ENST00000302118 OBSCNQ5VST9 7968 aa4.39□□□□□ -1.71
PCSK9-201ENST00000302118 SYNE1Q8NF91 8797 aaKnown RBP4.34□□□□□ -1.71
PCSK9-201ENST00000302118 FCGBPQ9Y6R7 5405 aaPredicted RBP4.34□□□□□ -1.71
PCSK9-201ENST00000302118 SSPOA2VEC9 5147 aa4.33□□□□□ -1.72
PCSK9-201ENST00000302118 MUC12Q9UKN1 5478 aa4.29□□□□□ -1.72
PCSK9-201ENST00000302118 KRTAP9-6A8MVA2 160 aa4.28□□□□□ -1.72
PCSK9-201ENST00000302118 KRTAP19-7Q3SYF9 63 aa4.25□□□□□ -1.73
PCSK9-201ENST00000302118 KRTAP4-3Q9BYR4 195 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms