RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 KRTAP3-2Q9BYR7 98 aa5.78□□□□□ -1.48
TRUB1-201ENST00000298746 FAT2Q9NYQ8 4349 aa5.77□□□□□ -1.49
TRUB1-201ENST00000298746 PKHD1P08F94 4074 aa5.75□□□□□ -1.49
TRUB1-201ENST00000298746 DNHD1Q96M86 4753 aa5.74□□□□□ -1.49
TRUB1-201ENST00000298746 XP32Q5T750 250 aa5.72□□□□□ -1.49
TRUB1-201ENST00000298746 MYCBP2O75592 4640 aa5.7□□□□□ -1.5
TRUB1-201ENST00000298746 PKD1P98161 4303 aa5.7□□□□□ -1.5
TRUB1-201ENST00000298746 KRTAP12-1P59990 96 aa5.7□□□□□ -1.5
TRUB1-201ENST00000298746 KRTAP15-1Q3LI76 137 aa5.69□□□□□ -1.5
TRUB1-201ENST00000298746 DYNC1H1Q14204 4646 aaKnown RBP5.69□□□□□ -1.5
TRUB1-201ENST00000298746 M0QZ58 72 aa5.68□□□□□ -1.5
TRUB1-201ENST00000298746 SACSQ9NZJ4 4579 aa5.68□□□□□ -1.5
TRUB1-201ENST00000298746 R4GN34 69 aa5.65□□□□□ -1.5
TRUB1-201ENST00000298746 KRTAP10-4P60372 401 aaPredicted RBP5.65□□□□□ -1.51
TRUB1-201ENST00000298746 Q5VSD8 79 aa5.64□□□□□ -1.51
TRUB1-201ENST00000298746 A0A1B0GVY2 172 aa5.58□□□□□ -1.52
TRUB1-201ENST00000298746 LRP1Q07954 4544 aaKnown RBP5.58□□□□□ -1.52
TRUB1-201ENST00000298746 APOBP04114 4563 aaKnown RBP5.55□□□□□ -1.52
TRUB1-201ENST00000298746 LUZP6Q538Z0 58 aa5.52□□□□□ -1.53
TRUB1-201ENST00000298746 PLAC4Q8WY50 150 aa5.52□□□□□ -1.53
TRUB1-201ENST00000298746 HSPG2P98160 4391 aa5.52□□□□□ -1.53
TRUB1-201ENST00000298746 CAMK2N1Q7Z7J9 78 aa5.5□□□□□ -1.53
TRUB1-201ENST00000298746 FAT3Q8TDW7 4589 aa5.45□□□□□ -1.54
TRUB1-201ENST00000298746 PKHD1L1Q86WI1 4243 aa5.44□□□□□ -1.54
TRUB1-201ENST00000298746 A0A0A0MQY5 61 aa5.39□□□□□ -1.55
TRUB1-201ENST00000298746 LRP2P98164 4655 aa5.37□□□□□ -1.55
TRUB1-201ENST00000298746 KMT2CQ8NEZ4 4911 aaKnown RBP5.33□□□□□ -1.56
TRUB1-201ENST00000298746 LORP23490 312 aaPredicted RBP5.32□□□□□ -1.56
TRUB1-201ENST00000298746 MT1HL1P0DM35 61 aa5.31□□□□□ -1.56
TRUB1-201ENST00000298746 LPAP08519 4548 aa5.31□□□□□ -1.56
TRUB1-201ENST00000298746 SEC61BP60468 96 aaKnown RBP5.29□□□□□ -1.56
TRUB1-201ENST00000298746 TNXBP22105 4242 aa5.28□□□□□ -1.56
TRUB1-201ENST00000298746 PP632Q6XCG6 107 aa5.26□□□□□ -1.57
TRUB1-201ENST00000298746 KIAA1109Q2LD37 5005 aa5.24□□□□□ -1.57
TRUB1-201ENST00000298746 RYR1P21817 5038 aa5.22□□□□□ -1.57
TRUB1-201ENST00000298746 J3QL48 77 aa5.2□□□□□ -1.58
TRUB1-201ENST00000298746 KRTAP17-1Q9BYP8 105 aa5.2□□□□□ -1.58
TRUB1-201ENST00000298746 RYR2Q92736 4967 aa5.19□□□□□ -1.58
TRUB1-201ENST00000298746 TNP1P09430 55 aa5.17□□□□□ -1.58
TRUB1-201ENST00000298746 RYR3Q15413 4870 aa5.15□□□□□ -1.58
TRUB1-201ENST00000298746 KRTAP21-3Q3LHN1 58 aa5.1□□□□□ -1.59
TRUB1-201ENST00000298746 KRTAP4-1Q9BYQ7 146 aa5.06□□□□□ -1.6
TRUB1-201ENST00000298746 KRTAP4-5Q9BYR2 181 aa5.03□□□□□ -1.6
TRUB1-201ENST00000298746 ABCA13Q86UQ4 5058 aa5□□□□□ -1.61
TRUB1-201ENST00000298746 M0R2T5 61 aa4.95□□□□□ -1.62
TRUB1-201ENST00000298746 MUC2Q02817 5179 aa4.88□□□□□ -1.63
TRUB1-201ENST00000298746 EPPK1P58107 5090 aaKnown RBP4.85□□□□□ -1.63
TRUB1-201ENST00000298746 MUC17Q685J3 4493 aa4.82□□□□□ -1.64
TRUB1-201ENST00000298746 KRTAP23-1A1A580 65 aa4.79□□□□□ -1.64
TRUB1-201ENST00000298746 LCE3AQ5TA76 89 aa4.77□□□□□ -1.65
TRUB1-201ENST00000298746 KRTAP19-2Q3LHN2 52 aa4.77□□□□□ -1.65
TRUB1-201ENST00000298746 SPRR5A0A1B0GTR4 108 aa4.75□□□□□ -1.65
TRUB1-201ENST00000298746 KRTAP10-10P60014 251 aa4.72□□□□□ -1.65
TRUB1-201ENST00000298746 HERC2O95714 4834 aa4.71□□□□□ -1.66
TRUB1-201ENST00000298746 PRO2289Q9P1D8 64 aa4.68□□□□□ -1.66
TRUB1-201ENST00000298746 FLGP20930 4061 aaPredicted RBP4.68□□□□□ -1.66
TRUB1-201ENST00000298746 FAT4Q6V0I7 4981 aa4.66□□□□□ -1.66
TRUB1-201ENST00000298746 SPRR2GQ9BYE4 73 aa4.61□□□□□ -1.67
TRUB1-201ENST00000298746 KRTAP19-1Q8IUB9 90 aa4.6□□□□□ -1.67
TRUB1-201ENST00000298746 PCLOQ9Y6V0 5065 aa4.59□□□□□ -1.67
TRUB1-201ENST00000298746 INE1O15225 51 aa4.58□□□□□ -1.68
TRUB1-201ENST00000298746 KRTAP12-3P60328 96 aa4.55□□□□□ -1.68
TRUB1-201ENST00000298746 KRTAP10-12P60413 245 aa4.52□□□□□ -1.69
TRUB1-201ENST00000298746 KRTAP8-1Q8IUC2 63 aa4.5□□□□□ -1.69
TRUB1-201ENST00000298746 HERC1Q15751 4861 aa4.5□□□□□ -1.69
TRUB1-201ENST00000298746 LCE2DQ5TA82 110 aaPredicted RBP4.49□□□□□ -1.69
TRUB1-201ENST00000298746 MT1FP04733 61 aa4.49□□□□□ -1.69
TRUB1-201ENST00000298746 LCE2CQ5TA81 110 aa4.47□□□□□ -1.69
TRUB1-201ENST00000298746 BIRC6Q9NR09 4857 aa4.46□□□□□ -1.69
TRUB1-201ENST00000298746 MT2AP02795 61 aa4.46□□□□□ -1.7
TRUB1-201ENST00000298746 RNF213Q63HN8 5207 aa4.46□□□□□ -1.7
TRUB1-201ENST00000298746 MT1HP80294 61 aa4.44□□□□□ -1.7
TRUB1-201ENST00000298746 HMCN2Q8NDA2 5059 aa4.44□□□□□ -1.7
TRUB1-201ENST00000298746 KRTAP10-5P60370 271 aa4.37□□□□□ -1.71
TRUB1-201ENST00000298746 MT1XP80297 61 aa4.37□□□□□ -1.71
TRUB1-201ENST00000298746 KRTAP10-7P60409 375 aaPredicted RBP4.36□□□□□ -1.71
TRUB1-201ENST00000298746 UBR4Q5T4S7 5183 aa4.34□□□□□ -1.71
TRUB1-201ENST00000298746 MT1BP07438 61 aa4.32□□□□□ -1.72
TRUB1-201ENST00000298746 KRTAP9-8Q9BYQ0 159 aa4.32□□□□□ -1.72
TRUB1-201ENST00000298746 KRTAP19-8Q3LI54 63 aa4.31□□□□□ -1.72
TRUB1-201ENST00000298746 KRTAP19-5Q3LI72 72 aa4.25□□□□□ -1.73
TRUB1-201ENST00000298746 LCE3CQ5T5A8 94 aa4.22□□□□□ -1.73
TRUB1-201ENST00000298746 KMT2DO14686 5537 aa4.16□□□□□ -1.74
TRUB1-201ENST00000298746 KRTAP9-3Q9BYQ3 159 aa4.11□□□□□ -1.75
TRUB1-201ENST00000298746 KRTAP4-8A0A0G2JLE6 195 aa4.11□□□□□ -1.75
TRUB1-201ENST00000298746 KRTAP4-8Q9BYQ9 185 aa4.11□□□□□ -1.75
TRUB1-201ENST00000298746 USH2AO75445 5202 aa4.1□□□□□ -1.75
TRUB1-201ENST00000298746 KRTAP4-7Q9BYR0 210 aa4.06□□□□□ -1.76
TRUB1-201ENST00000298746 KRTAP9-6A8MVA2 160 aa4.03□□□□□ -1.76
TRUB1-201ENST00000298746 LCE2BO14633 110 aa3.97□□□□□ -1.77
TRUB1-201ENST00000298746 CRCT1Q9UGL9 99 aa3.93□□□□□ -1.78
TRUB1-201ENST00000298746 KRTAP2-3P0C7H8 128 aa3.89□□□□□ -1.79
TRUB1-201ENST00000298746 KRTAP2-4Q9BYR9 128 aa3.89□□□□□ -1.79
TRUB1-201ENST00000298746 KRTAP2-1Q9BYU5 128 aa3.89□□□□□ -1.79
TRUB1-201ENST00000298746 KRTAP19-7Q3SYF9 63 aa3.86□□□□□ -1.79
TRUB1-201ENST00000298746 FSIP2Q5CZC0 6907 aa3.82□□□□□ -1.8
TRUB1-201ENST00000298746 MT1LQ93083 61 aa3.81□□□□□ -1.8
TRUB1-201ENST00000298746 LOC100996750A0A140TA64 210 aa3.76□□□□□ -1.81
TRUB1-201ENST00000298746 KRTAP12-4P60329 112 aa3.76□□□□□ -1.81
TRUB1-201ENST00000298746 MT1EP04732 61 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 160.2 ms