RNA–Protein interactions for RNA: ENST00000297977.9

HDX-201, Transcript of highly divergent homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDX, Length 6,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDX-201ENST00000297977 PKHD1P08F94 4074 aa1.74□□□□□ -2.13
HDX-201ENST00000297977 RPL37P61927 97 aaKnown RBP1.74□□□□□ -2.13
HDX-201ENST00000297977 PKHD1L1Q86WI1 4243 aa1.74□□□□□ -2.13
HDX-201ENST00000297977 H0YAA0 97 aa1.74□□□□□ -2.13
HDX-201ENST00000297977 KRTAP19-4Q3LI73 84 aa1.72□□□□□ -2.13
HDX-201ENST00000297977 VPS13BQ7Z7G8 4022 aa1.71□□□□□ -2.14
HDX-201ENST00000297977 PRO2289Q9P1D8 64 aa1.71□□□□□ -2.14
HDX-201ENST00000297977 A8MU10 97 aa1.7□□□□□ -2.14
HDX-201ENST00000297977 KRTAP13-3Q3SY46 172 aa1.7□□□□□ -2.14
HDX-201ENST00000297977 EPPK1P58107 5090 aaKnown RBP1.7□□□□□ -2.14
HDX-201ENST00000297977 XP32Q5T750 250 aa1.7□□□□□ -2.14
HDX-201ENST00000297977 H1FX-AS1Q4G0G2 97 aa1.69□□□□□ -2.14
HDX-201ENST00000297977 DYNC2H1Q8NCM8 4307 aaKnown RBP1.69□□□□□ -2.14
HDX-201ENST00000297977 FAT2Q9NYQ8 4349 aa1.69□□□□□ -2.14
HDX-201ENST00000297977 MT1HL1P0DM35 61 aa1.68□□□□□ -2.14
HDX-201ENST00000297977 KIAA1109Q2LD37 5005 aa1.68□□□□□ -2.14
HDX-201ENST00000297977 KRTAP10-4P60372 401 aaPredicted RBP1.67□□□□□ -2.14
HDX-201ENST00000297977 HSPG2P98160 4391 aa1.66□□□□□ -2.14
HDX-201ENST00000297977 TNXBP22105 4242 aa1.66□□□□□ -2.14
HDX-201ENST00000297977 ALMS1Q8TCU4 4167 aa1.65□□□□□ -2.14
HDX-201ENST00000297977 P0C880 135 aa1.65□□□□□ -2.14
HDX-201ENST00000297977 BIRC6Q9NR09 4857 aa1.65□□□□□ -2.15
HDX-201ENST00000297977 RYR1P21817 5038 aa1.65□□□□□ -2.15
HDX-201ENST00000297977 LCE2AQ5TA79 106 aaPredicted RBP1.64□□□□□ -2.15
HDX-201ENST00000297977 KRTAP4-5Q9BYR2 181 aa1.64□□□□□ -2.15
HDX-201ENST00000297977 ABCA13Q86UQ4 5058 aa1.64□□□□□ -2.15
HDX-201ENST00000297977 INE1O15225 51 aa1.64□□□□□ -2.15
HDX-201ENST00000297977 DNAH11Q96DT5 4516 aa1.64□□□□□ -2.15
HDX-201ENST00000297977 KRTAP10-10P60014 251 aa1.64□□□□□ -2.15
HDX-201ENST00000297977 PLECQ15149 4684 aaKnown RBP1.63□□□□□ -2.15
HDX-201ENST00000297977 HERC2O95714 4834 aa1.62□□□□□ -2.15
HDX-201ENST00000297977 DNAH9Q9NYC9 4486 aa1.62□□□□□ -2.15
HDX-201ENST00000297977 DNAH5Q8TE73 4624 aa1.61□□□□□ -2.15
HDX-201ENST00000297977 PKD1P98161 4303 aa1.6□□□□□ -2.15
HDX-201ENST00000297977 TNP1P09430 55 aa1.59□□□□□ -2.15
HDX-201ENST00000297977 DNAH10Q8IVF4 4471 aa1.59□□□□□ -2.15
HDX-201ENST00000297977 KRTAP15-1Q3LI76 137 aa1.57□□□□□ -2.16
HDX-201ENST00000297977 DYNC1H1Q14204 4646 aaKnown RBP1.57□□□□□ -2.16
HDX-201ENST00000297977 MYCBP2O75592 4640 aa1.57□□□□□ -2.16
HDX-201ENST00000297977 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.56□□□□□ -2.16
HDX-201ENST00000297977 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.56□□□□□ -2.16
HDX-201ENST00000297977 MUC2Q02817 5179 aa1.56□□□□□ -2.16
HDX-201ENST00000297977 DNAH8Q96JB1 4490 aa1.54□□□□□ -2.16
HDX-201ENST00000297977 SACSQ9NZJ4 4579 aa1.54□□□□□ -2.16
HDX-201ENST00000297977 C10orf95Q9H7T3 257 aa1.54□□□□□ -2.16
HDX-201ENST00000297977 DNAH2Q9P225 4427 aa1.53□□□□□ -2.16
HDX-201ENST00000297977 KRTAP3-1Q9BYR8 98 aa1.52□□□□□ -2.17
HDX-201ENST00000297977 STARD9Q9P2P6 4700 aa1.52□□□□□ -2.17
HDX-201ENST00000297977 FAT1Q14517 4588 aa1.51□□□□□ -2.17
HDX-201ENST00000297977 LRP1BQ9NZR2 4599 aa1.51□□□□□ -2.17
HDX-201ENST00000297977 KRTAP4-8Q9BYQ9 185 aa1.51□□□□□ -2.17
HDX-201ENST00000297977 FAT4Q6V0I7 4981 aa1.5□□□□□ -2.17
HDX-201ENST00000297977 KRTAP5-2Q701N4 177 aa1.5□□□□□ -2.17
HDX-201ENST00000297977 KRTAP4-2Q9BYR5 136 aa1.49□□□□□ -2.17
HDX-201ENST00000297977 LCE2BO14633 110 aa1.48□□□□□ -2.17
HDX-201ENST00000297977 DNAH17Q9UFH2 4485 aa1.48□□□□□ -2.17
HDX-201ENST00000297977 KRTAP5-3Q6L8H2 238 aa1.48□□□□□ -2.17
HDX-201ENST00000297977 KRTAP9-2Q9BYQ4 174 aa1.48□□□□□ -2.17
HDX-201ENST00000297977 KRTAP13-4Q3LI77 160 aa1.47□□□□□ -2.17
HDX-201ENST00000297977 APOBP04114 4563 aaKnown RBP1.47□□□□□ -2.17
HDX-201ENST00000297977 HERC1Q15751 4861 aa1.47□□□□□ -2.17
HDX-201ENST00000297977 KRTAP12-2P59991 146 aa1.47□□□□□ -2.17
HDX-201ENST00000297977 KRTAP4-12Q9BQ66 201 aa1.46□□□□□ -2.17
HDX-201ENST00000297977 UBR4Q5T4S7 5183 aa1.46□□□□□ -2.18
HDX-201ENST00000297977 MT3P25713 68 aa1.45□□□□□ -2.18
HDX-201ENST00000297977 KRTAP10-6P60371 365 aaPredicted RBP1.44□□□□□ -2.18
HDX-201ENST00000297977 KRTAP9-8Q9BYQ0 159 aa1.43□□□□□ -2.18
HDX-201ENST00000297977 MT1HP80294 61 aa1.42□□□□□ -2.18
HDX-201ENST00000297977 KRTAP4-8A0A0G2JLE6 195 aa1.42□□□□□ -2.18
HDX-201ENST00000297977 KRTAP4-1Q9BYQ7 146 aa1.41□□□□□ -2.18
HDX-201ENST00000297977 FLGP20930 4061 aaPredicted RBP1.41□□□□□ -2.18
HDX-201ENST00000297977 RNF213Q63HN8 5207 aa1.41□□□□□ -2.18
HDX-201ENST00000297977 KRTAP9-9Q9BYP9 154 aa1.41□□□□□ -2.18
HDX-201ENST00000297977 KRTAP9-4Q9BYQ2 154 aa1.41□□□□□ -2.18
HDX-201ENST00000297977 HMCN2Q8NDA2 5059 aa1.41□□□□□ -2.18
HDX-201ENST00000297977 LORP23490 312 aaPredicted RBP1.4□□□□□ -2.18
HDX-201ENST00000297977 KRTAP12-1P59990 96 aa1.4□□□□□ -2.19
HDX-201ENST00000297977 LRP2P98164 4655 aa1.39□□□□□ -2.19
HDX-201ENST00000297977 LRP1Q07954 4544 aaKnown RBP1.38□□□□□ -2.19
HDX-201ENST00000297977 MT2AP02795 61 aa1.38□□□□□ -2.19
HDX-201ENST00000297977 KRTAP8-1Q8IUC2 63 aa1.38□□□□□ -2.19
HDX-201ENST00000297977 LCE2CQ5TA81 110 aa1.37□□□□□ -2.19
HDX-201ENST00000297977 CRCT1Q9UGL9 99 aa1.37□□□□□ -2.19
HDX-201ENST00000297977 SSPOA2VEC9 5147 aa1.36□□□□□ -2.19
HDX-201ENST00000297977 KRTAP4-7Q9BYR0 210 aa1.35□□□□□ -2.19
HDX-201ENST00000297977 SPRR2GQ9BYE4 73 aa1.35□□□□□ -2.19
HDX-201ENST00000297977 KRTAP9-6A0A140TA67 174 aa1.34□□□□□ -2.19
HDX-201ENST00000297977 MT1FP04733 61 aa1.34□□□□□ -2.2
HDX-201ENST00000297977 KRTAP19-8Q3LI54 63 aa1.33□□□□□ -2.2
HDX-201ENST00000297977 SPRR5A0A1B0GTR4 108 aa1.32□□□□□ -2.2
HDX-201ENST00000297977 MUC5BQ9HC84 5762 aaPredicted RBP1.32□□□□□ -2.2
HDX-201ENST00000297977 KRTAP10-12P60413 245 aa1.31□□□□□ -2.2
HDX-201ENST00000297977 KRTAP19-2Q3LHN2 52 aa1.3□□□□□ -2.2
HDX-201ENST00000297977 LPAP08519 4548 aa1.3□□□□□ -2.2
HDX-201ENST00000297977 KRTAP19-1Q8IUB9 90 aa1.28□□□□□ -2.2
HDX-201ENST00000297977 KRTAP9-3Q9BYQ3 159 aa1.28□□□□□ -2.21
HDX-201ENST00000297977 FSIP2Q5CZC0 6907 aa1.27□□□□□ -2.21
HDX-201ENST00000297977 SPRR2EP22531 72 aa1.27□□□□□ -2.21
HDX-201ENST00000297977 SPRR2BP35325 72 aa1.27□□□□□ -2.21
HDX-201ENST00000297977 SPRR2AP35326 72 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms