RNA–Protein interactions for RNA: ENST00000297439.3

DEFB1-201, Transcript of defensin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEFB1, Length 478 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEFB1-201ENST00000297439 PMAIP1Q13794 54 aa3.61□□□□□ -1.83
DEFB1-201ENST00000297439 KRTAP15-1Q3LI76 137 aa3.61□□□□□ -1.83
DEFB1-201ENST00000297439 HYDINQ4G0P3 5121 aa3.59□□□□□ -1.83
DEFB1-201ENST00000297439 A0A1B0GU69 56 aa3.59□□□□□ -1.83
DEFB1-201ENST00000297439 A6NN06 94 aa3.59□□□□□ -1.83
DEFB1-201ENST00000297439 A8MU10 97 aa3.59□□□□□ -1.83
DEFB1-201ENST00000297439 SPINK7P58062 85 aa3.59□□□□□ -1.83
DEFB1-201ENST00000297439 SPTSSBQ8NFR3 76 aa3.59□□□□□ -1.83
DEFB1-201ENST00000297439 RETNLBQ9BQ08 111 aa3.59□□□□□ -1.83
DEFB1-201ENST00000297439 VPS13BQ7Z7G8 4022 aa3.59□□□□□ -1.84
DEFB1-201ENST00000297439 DYNC1H1Q14204 4646 aaKnown RBP3.57□□□□□ -1.84
DEFB1-201ENST00000297439 SPATA8Q6RVD6 105 aa3.57□□□□□ -1.84
DEFB1-201ENST00000297439 KTN1-AS1Q86SY8 53 aa3.57□□□□□ -1.84
DEFB1-201ENST00000297439 UQCR11O14957 56 aa3.56□□□□□ -1.84
DEFB1-201ENST00000297439 SMR3BP02814 79 aaPredicted RBP3.56□□□□□ -1.84
DEFB1-201ENST00000297439 KRTAP10-8P60410 259 aa3.55□□□□□ -1.84
DEFB1-201ENST00000297439 PKHD1L1Q86WI1 4243 aa3.55□□□□□ -1.84
DEFB1-201ENST00000297439 APOBP04114 4563 aaKnown RBP3.54□□□□□ -1.84
DEFB1-201ENST00000297439 SEC61GP60059 68 aa3.51□□□□□ -1.85
DEFB1-201ENST00000297439 MIR22HGQ0VDD5 57 aa3.51□□□□□ -1.85
DEFB1-201ENST00000297439 COX6B2Q6YFQ2 88 aa3.51□□□□□ -1.85
DEFB1-201ENST00000297439 C9orf92A6NGG3 77 aa3.5□□□□□ -1.85
DEFB1-201ENST00000297439 PKHD1P08F94 4074 aa3.49□□□□□ -1.85
DEFB1-201ENST00000297439 FLG2Q5D862 2391 aaPredicted RBP3.49□□□□□ -1.85
DEFB1-201ENST00000297439 RYR2Q92736 4967 aa3.48□□□□□ -1.85
DEFB1-201ENST00000297439 RPL37P61927 97 aaKnown RBP3.48□□□□□ -1.85
DEFB1-201ENST00000297439 Q5VSD8 79 aa3.47□□□□□ -1.85
DEFB1-201ENST00000297439 FAT1Q14517 4588 aa3.44□□□□□ -1.86
DEFB1-201ENST00000297439 A0A1B0GU33 70 aa3.42□□□□□ -1.86
DEFB1-201ENST00000297439 H1FX-AS1Q4G0G2 97 aa3.42□□□□□ -1.86
DEFB1-201ENST00000297439 MT1HL1P0DM35 61 aa3.41□□□□□ -1.86
DEFB1-201ENST00000297439 RBM12B-AS1Q9P1G2 102 aa3.41□□□□□ -1.86
DEFB1-201ENST00000297439 H0YAA0 97 aa3.4□□□□□ -1.87
DEFB1-201ENST00000297439 TPRXLQ17RH7 258 aa3.39□□□□□ -1.87
DEFB1-201ENST00000297439 TNXBP22105 4242 aa3.39□□□□□ -1.87
DEFB1-201ENST00000297439 KMT2CQ8NEZ4 4911 aaKnown RBP3.39□□□□□ -1.87
DEFB1-201ENST00000297439 FAT3Q8TDW7 4589 aa3.39□□□□□ -1.87
DEFB1-201ENST00000297439 RYR3Q15413 4870 aa3.38□□□□□ -1.87
DEFB1-201ENST00000297439 RYR1P21817 5038 aa3.35□□□□□ -1.87
DEFB1-201ENST00000297439 HSPG2P98160 4391 aa3.35□□□□□ -1.87
DEFB1-201ENST00000297439 KRTAP10-6P60371 365 aaPredicted RBP3.34□□□□□ -1.87
DEFB1-201ENST00000297439 S4R3F8 94 aa3.34□□□□□ -1.87
DEFB1-201ENST00000297439 K7ERS5 55 aa3.33□□□□□ -1.88
DEFB1-201ENST00000297439 LRP1Q07954 4544 aaKnown RBP3.31□□□□□ -1.88
DEFB1-201ENST00000297439 ADM2Q7Z4H4 148 aa3.3□□□□□ -1.88
DEFB1-201ENST00000297439 PRAC1Q96KF2 57 aa3.3□□□□□ -1.88
DEFB1-201ENST00000297439 DMBT1Q9UGM3 2413 aaPredicted RBP3.28□□□□□ -1.88
DEFB1-201ENST00000297439 LINC01554Q52M75 96 aa3.28□□□□□ -1.88
DEFB1-201ENST00000297439 BIRC6Q9NR09 4857 aa3.27□□□□□ -1.89
DEFB1-201ENST00000297439 CSAG1Q6PB30 78 aa3.26□□□□□ -1.89
DEFB1-201ENST00000297439 EPPK1P58107 5090 aaKnown RBP3.25□□□□□ -1.89
DEFB1-201ENST00000297439 KIAA1109Q2LD37 5005 aa3.24□□□□□ -1.89
DEFB1-201ENST00000297439 M0QZ58 72 aa3.24□□□□□ -1.89
DEFB1-201ENST00000297439 KRTAP25-1Q3LHN0 102 aa3.24□□□□□ -1.89
DEFB1-201ENST00000297439 KRTAP13-4Q3LI77 160 aa3.24□□□□□ -1.89
DEFB1-201ENST00000297439 ROMO1P60602 79 aa3.23□□□□□ -1.89
DEFB1-201ENST00000297439 MYCBP2O75592 4640 aa3.22□□□□□ -1.89
DEFB1-201ENST00000297439 P0C880 135 aa3.22□□□□□ -1.89
DEFB1-201ENST00000297439 LCE1AQ5T7P2 110 aa3.22□□□□□ -1.89
DEFB1-201ENST00000297439 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.21□□□□□ -1.9
DEFB1-201ENST00000297439 KRTAP12-1P59990 96 aa3.17□□□□□ -1.9
DEFB1-201ENST00000297439 KRTAP10-7P60409 375 aaPredicted RBP3.17□□□□□ -1.9
DEFB1-201ENST00000297439 A0A0D9SG42 100 aa3.15□□□□□ -1.91
DEFB1-201ENST00000297439 KRTAP12-2P59991 146 aa3.14□□□□□ -1.91
DEFB1-201ENST00000297439 KRTAP5-11Q6L8G4 156 aa3.14□□□□□ -1.91
DEFB1-201ENST00000297439 PCLOQ9Y6V0 5065 aa3.14□□□□□ -1.91
DEFB1-201ENST00000297439 KRTAP19-2Q3LHN2 52 aa3.13□□□□□ -1.91
DEFB1-201ENST00000297439 HERC2O95714 4834 aa3.12□□□□□ -1.91
DEFB1-201ENST00000297439 LRP2P98164 4655 aa3.11□□□□□ -1.91
DEFB1-201ENST00000297439 KRTAP4-1Q9BYQ7 146 aa3.1□□□□□ -1.91
DEFB1-201ENST00000297439 CRIPTQ9P021 101 aa3.08□□□□□ -1.92
DEFB1-201ENST00000297439 R4GN34 69 aa3.08□□□□□ -1.92
DEFB1-201ENST00000297439 MUC17Q685J3 4493 aa3.07□□□□□ -1.92
DEFB1-201ENST00000297439 SPINT4Q6UDR6 99 aa3.07□□□□□ -1.92
DEFB1-201ENST00000297439 KRTAP2-2Q9BYT5 123 aa3.04□□□□□ -1.92
DEFB1-201ENST00000297439 ABCA13Q86UQ4 5058 aa3.04□□□□□ -1.92
DEFB1-201ENST00000297439 LPAP08519 4548 aa3.03□□□□□ -1.92
DEFB1-201ENST00000297439 C10orf95Q9H7T3 257 aa2.99□□□□□ -1.93
DEFB1-201ENST00000297439 LCE1EQ5T753 118 aa2.98□□□□□ -1.93
DEFB1-201ENST00000297439 NDUFAF8A1L188 74 aa2.96□□□□□ -1.94
DEFB1-201ENST00000297439 PP632Q6XCG6 107 aa2.96□□□□□ -1.94
DEFB1-201ENST00000297439 FLGP20930 4061 aaPredicted RBP2.93□□□□□ -1.94
DEFB1-201ENST00000297439 HERC1Q15751 4861 aa2.92□□□□□ -1.94
DEFB1-201ENST00000297439 SPRR2GQ9BYE4 73 aa2.91□□□□□ -1.94
DEFB1-201ENST00000297439 CAMK2N1Q7Z7J9 78 aa2.9□□□□□ -1.95
DEFB1-201ENST00000297439 HMCN2Q8NDA2 5059 aa2.88□□□□□ -1.95
DEFB1-201ENST00000297439 UBR4Q5T4S7 5183 aa2.85□□□□□ -1.95
DEFB1-201ENST00000297439 TNP1P09430 55 aa2.84□□□□□ -1.95
DEFB1-201ENST00000297439 MT1HP80294 61 aa2.84□□□□□ -1.95
DEFB1-201ENST00000297439 PLAC4Q8WY50 150 aa2.82□□□□□ -1.96
DEFB1-201ENST00000297439 KRTAP19-8Q3LI54 63 aa2.8□□□□□ -1.96
DEFB1-201ENST00000297439 MT2AP02795 61 aa2.79□□□□□ -1.96
DEFB1-201ENST00000297439 M0R2T5 61 aa2.77□□□□□ -1.97
DEFB1-201ENST00000297439 MT1FP04733 61 aa2.77□□□□□ -1.97
DEFB1-201ENST00000297439 KRTAP5-1Q6L8H4 278 aa2.77□□□□□ -1.97
DEFB1-201ENST00000297439 MUC2Q02817 5179 aa2.76□□□□□ -1.97
DEFB1-201ENST00000297439 SPRR5A0A1B0GTR4 108 aa2.74□□□□□ -1.97
DEFB1-201ENST00000297439 MT3P25713 68 aa2.74□□□□□ -1.97
DEFB1-201ENST00000297439 KRTAP10-10P60014 251 aa2.74□□□□□ -1.97
DEFB1-201ENST00000297439 RNF213Q63HN8 5207 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms