RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 C20orf166-AS1Q96NR2 134 aa7.03□□□□□ -1.28
TNFRSF21-201ENST00000296861 APOBP04114 4563 aaKnown RBP7.01□□□□□ -1.29
TNFRSF21-201ENST00000296861 C10orf95Q9H7T3 257 aa6.98□□□□□ -1.29
TNFRSF21-201ENST00000296861 A0A1B0GVY2 172 aa6.98□□□□□ -1.29
TNFRSF21-201ENST00000296861 RPL37P61927 97 aaKnown RBP6.96□□□□□ -1.3
TNFRSF21-201ENST00000296861 Q5VSD8 79 aa6.95□□□□□ -1.3
TNFRSF21-201ENST00000296861 S4R3F8 94 aa6.95□□□□□ -1.3
TNFRSF21-201ENST00000296861 RYR2Q92736 4967 aa6.91□□□□□ -1.3
TNFRSF21-201ENST00000296861 FAT3Q8TDW7 4589 aa6.91□□□□□ -1.3
TNFRSF21-201ENST00000296861 RPS29P62273 56 aaKnown RBP6.9□□□□□ -1.3
TNFRSF21-201ENST00000296861 KIAA1109Q2LD37 5005 aa6.89□□□□□ -1.31
TNFRSF21-201ENST00000296861 KRTAP10-8P60410 259 aa6.89□□□□□ -1.31
TNFRSF21-201ENST00000296861 RYR3Q15413 4870 aa6.88□□□□□ -1.31
TNFRSF21-201ENST00000296861 KRTAP13-4Q3LI77 160 aa6.87□□□□□ -1.31
TNFRSF21-201ENST00000296861 KRTAP10-4P60372 401 aaPredicted RBP6.81□□□□□ -1.32
TNFRSF21-201ENST00000296861 XP32Q5T750 250 aa6.8□□□□□ -1.32
TNFRSF21-201ENST00000296861 PKHD1L1Q86WI1 4243 aa6.76□□□□□ -1.33
TNFRSF21-201ENST00000296861 KRTAP10-6P60371 365 aaPredicted RBP6.76□□□□□ -1.33
TNFRSF21-201ENST00000296861 TPRXLQ17RH7 258 aa6.73□□□□□ -1.33
TNFRSF21-201ENST00000296861 HSPG2P98160 4391 aa6.73□□□□□ -1.33
TNFRSF21-201ENST00000296861 RYR1P21817 5038 aa6.72□□□□□ -1.33
TNFRSF21-201ENST00000296861 LUZP6Q538Z0 58 aa6.72□□□□□ -1.33
TNFRSF21-201ENST00000296861 KRTAP3-3Q9BYR6 98 aa6.71□□□□□ -1.33
TNFRSF21-201ENST00000296861 KRTAP12-2P59991 146 aa6.7□□□□□ -1.34
TNFRSF21-201ENST00000296861 EPPK1P58107 5090 aaKnown RBP6.7□□□□□ -1.34
TNFRSF21-201ENST00000296861 KRTAP17-1Q9BYP8 105 aa6.7□□□□□ -1.34
TNFRSF21-201ENST00000296861 M0QZ58 72 aa6.69□□□□□ -1.34
TNFRSF21-201ENST00000296861 R4GN34 69 aa6.66□□□□□ -1.34
TNFRSF21-201ENST00000296861 KRTAP3-2Q9BYR7 98 aa6.64□□□□□ -1.35
TNFRSF21-201ENST00000296861 LPAP08519 4548 aa6.62□□□□□ -1.35
TNFRSF21-201ENST00000296861 LRP2P98164 4655 aa6.61□□□□□ -1.35
TNFRSF21-201ENST00000296861 TNXBP22105 4242 aa6.58□□□□□ -1.36
TNFRSF21-201ENST00000296861 J3QL48 77 aa6.57□□□□□ -1.36
TNFRSF21-201ENST00000296861 ABCA13Q86UQ4 5058 aa6.56□□□□□ -1.36
TNFRSF21-201ENST00000296861 KRTAP4-5Q9BYR2 181 aa6.55□□□□□ -1.36
TNFRSF21-201ENST00000296861 KRTAP12-1P59990 96 aa6.54□□□□□ -1.36
TNFRSF21-201ENST00000296861 MT1HL1P0DM35 61 aa6.51□□□□□ -1.37
TNFRSF21-201ENST00000296861 CAMK2N1Q7Z7J9 78 aa6.49□□□□□ -1.37
TNFRSF21-201ENST00000296861 KRTAP15-1Q3LI76 137 aa6.47□□□□□ -1.37
TNFRSF21-201ENST00000296861 MUC2Q02817 5179 aa6.41□□□□□ -1.38
TNFRSF21-201ENST00000296861 LORP23490 312 aaPredicted RBP6.34□□□□□ -1.39
TNFRSF21-201ENST00000296861 HERC2O95714 4834 aa6.33□□□□□ -1.4
TNFRSF21-201ENST00000296861 SEC61BP60468 96 aaKnown RBP6.33□□□□□ -1.4
TNFRSF21-201ENST00000296861 PLAC4Q8WY50 150 aa6.26□□□□□ -1.41
TNFRSF21-201ENST00000296861 HERC1Q15751 4861 aa6.22□□□□□ -1.41
TNFRSF21-201ENST00000296861 M0R2T5 61 aa6.16□□□□□ -1.42
TNFRSF21-201ENST00000296861 KRTAP4-1Q9BYQ7 146 aa6.14□□□□□ -1.43
TNFRSF21-201ENST00000296861 FAT4Q6V0I7 4981 aa6.08□□□□□ -1.44
TNFRSF21-201ENST00000296861 RNF213Q63HN8 5207 aa6.08□□□□□ -1.44
TNFRSF21-201ENST00000296861 PCLOQ9Y6V0 5065 aa6.07□□□□□ -1.44
TNFRSF21-201ENST00000296861 BIRC6Q9NR09 4857 aa6.01□□□□□ -1.45
TNFRSF21-201ENST00000296861 TNP1P09430 55 aa5.98□□□□□ -1.45
TNFRSF21-201ENST00000296861 PP632Q6XCG6 107 aa5.95□□□□□ -1.46
TNFRSF21-201ENST00000296861 MUC17Q685J3 4493 aa5.93□□□□□ -1.46
TNFRSF21-201ENST00000296861 UBR4Q5T4S7 5183 aa5.92□□□□□ -1.46
TNFRSF21-201ENST00000296861 KRTAP10-10P60014 251 aa5.78□□□□□ -1.48
TNFRSF21-201ENST00000296861 HMCN2Q8NDA2 5059 aa5.77□□□□□ -1.48
TNFRSF21-201ENST00000296861 FLGP20930 4061 aaPredicted RBP5.67□□□□□ -1.5
TNFRSF21-201ENST00000296861 KRTAP19-2Q3LHN2 52 aa5.65□□□□□ -1.5
TNFRSF21-201ENST00000296861 LCE3AQ5TA76 89 aa5.6□□□□□ -1.51
TNFRSF21-201ENST00000296861 PRO2289Q9P1D8 64 aa5.51□□□□□ -1.53
TNFRSF21-201ENST00000296861 LCE2CQ5TA81 110 aa5.5□□□□□ -1.53
TNFRSF21-201ENST00000296861 MT1HP80294 61 aa5.49□□□□□ -1.53
TNFRSF21-201ENST00000296861 KRTAP19-1Q8IUB9 90 aa5.46□□□□□ -1.54
TNFRSF21-201ENST00000296861 MT1FP04733 61 aa5.43□□□□□ -1.54
TNFRSF21-201ENST00000296861 KRTAP23-1A1A580 65 aa5.43□□□□□ -1.54
TNFRSF21-201ENST00000296861 USH2AO75445 5202 aa5.42□□□□□ -1.54
TNFRSF21-201ENST00000296861 MT2AP02795 61 aa5.38□□□□□ -1.55
TNFRSF21-201ENST00000296861 SPRR2GQ9BYE4 73 aa5.37□□□□□ -1.55
TNFRSF21-201ENST00000296861 FSIP2Q5CZC0 6907 aa5.37□□□□□ -1.55
TNFRSF21-201ENST00000296861 SPRR5A0A1B0GTR4 108 aa5.37□□□□□ -1.55
TNFRSF21-201ENST00000296861 KRTAP10-12P60413 245 aa5.31□□□□□ -1.56
TNFRSF21-201ENST00000296861 KRTAP12-3P60328 96 aa5.31□□□□□ -1.56
TNFRSF21-201ENST00000296861 KRTAP9-8Q9BYQ0 159 aa5.26□□□□□ -1.57
TNFRSF21-201ENST00000296861 KMT2DO14686 5537 aa5.26□□□□□ -1.57
TNFRSF21-201ENST00000296861 KRTAP10-7P60409 375 aaPredicted RBP5.21□□□□□ -1.58
TNFRSF21-201ENST00000296861 MT1XP80297 61 aa5.16□□□□□ -1.58
TNFRSF21-201ENST00000296861 KRTAP10-5P60370 271 aa5.15□□□□□ -1.58
TNFRSF21-201ENST00000296861 KRTAP8-1Q8IUC2 63 aa5.15□□□□□ -1.59
TNFRSF21-201ENST00000296861 MT1BP07438 61 aa5.15□□□□□ -1.59
TNFRSF21-201ENST00000296861 INE1O15225 51 aa5.14□□□□□ -1.59
TNFRSF21-201ENST00000296861 KRTAP19-5Q3LI72 72 aa5.04□□□□□ -1.6
TNFRSF21-201ENST00000296861 KRTAP19-8Q3LI54 63 aa5.03□□□□□ -1.6
TNFRSF21-201ENST00000296861 KRTAP9-3Q9BYQ3 159 aa5.03□□□□□ -1.6
TNFRSF21-201ENST00000296861 KRTAP4-8A0A0G2JLE6 195 aa5.03□□□□□ -1.6
TNFRSF21-201ENST00000296861 KRTAP4-8Q9BYQ9 185 aa5.03□□□□□ -1.6
TNFRSF21-201ENST00000296861 OBSCNQ5VST9 7968 aa5.02□□□□□ -1.61
TNFRSF21-201ENST00000296861 LCE2BO14633 110 aa4.95□□□□□ -1.62
TNFRSF21-201ENST00000296861 KRTAP4-7Q9BYR0 210 aa4.92□□□□□ -1.62
TNFRSF21-201ENST00000296861 CRCT1Q9UGL9 99 aa4.91□□□□□ -1.62
TNFRSF21-201ENST00000296861 LCE3CQ5T5A8 94 aa4.86□□□□□ -1.63
TNFRSF21-201ENST00000296861 LCE2AQ5TA79 106 aaPredicted RBP4.84□□□□□ -1.63
TNFRSF21-201ENST00000296861 DSTQ03001 7570 aaKnown RBP4.84□□□□□ -1.63
TNFRSF21-201ENST00000296861 FCGBPQ9Y6R7 5405 aaPredicted RBP4.79□□□□□ -1.64
TNFRSF21-201ENST00000296861 SYNE1Q8NF91 8797 aaKnown RBP4.78□□□□□ -1.64
TNFRSF21-201ENST00000296861 SSPOA2VEC9 5147 aa4.74□□□□□ -1.65
TNFRSF21-201ENST00000296861 KRTAP9-6A8MVA2 160 aa4.7□□□□□ -1.66
TNFRSF21-201ENST00000296861 MUC12Q9UKN1 5478 aa4.65□□□□□ -1.67
TNFRSF21-201ENST00000296861 KRTAP4-3Q9BYR4 195 aa4.57□□□□□ -1.68
TNFRSF21-201ENST00000296861 LOC100996750A0A140TA64 210 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms