RNA–Protein interactions for RNA: ENST00000296550.11

DCLK2-201, Transcript of doublecortin like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DCLK2, Length 4,265 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCLK2-201ENST00000296550 KMT2AQ03164 3969 aa8.1□□□□□ -1.11
DCLK2-201ENST00000296550 PLAC4Q8WY50 150 aa8.07□□□□□ -1.12
DCLK2-201ENST00000296550 A0A0A0MQY5 61 aa8.06□□□□□ -1.12
DCLK2-201ENST00000296550 KRTAP10-6P60371 365 aaPredicted RBP8.05□□□□□ -1.12
DCLK2-201ENST00000296550 MT1HL1P0DM35 61 aa8.02□□□□□ -1.13
DCLK2-201ENST00000296550 KRTAP13-4Q3LI77 160 aa8.01□□□□□ -1.13
DCLK2-201ENST00000296550 FAT1Q14517 4588 aa8.01□□□□□ -1.13
DCLK2-201ENST00000296550 KRTAP12-2P59991 146 aa7.98□□□□□ -1.13
DCLK2-201ENST00000296550 FRAS1Q86XX4 4008 aa7.97□□□□□ -1.13
DCLK2-201ENST00000296550 KRTAP3-3Q9BYR6 98 aa7.96□□□□□ -1.14
DCLK2-201ENST00000296550 DYNC1H1Q14204 4646 aaKnown RBP7.96□□□□□ -1.14
DCLK2-201ENST00000296550 DNAH7Q8WXX0 4024 aa7.94□□□□□ -1.14
DCLK2-201ENST00000296550 DYNC2H1Q8NCM8 4307 aaKnown RBP7.94□□□□□ -1.14
DCLK2-201ENST00000296550 KRTAP15-1Q3LI76 137 aa7.91□□□□□ -1.14
DCLK2-201ENST00000296550 KRTAP12-1P59990 96 aa7.9□□□□□ -1.14
DCLK2-201ENST00000296550 KRTAP3-2Q9BYR7 98 aa7.89□□□□□ -1.15
DCLK2-201ENST00000296550 KRTAP4-5Q9BYR2 181 aa7.86□□□□□ -1.15
DCLK2-201ENST00000296550 HECTD4Q9Y4D8 3996 aa7.82□□□□□ -1.16
DCLK2-201ENST00000296550 DNAH6Q9C0G6 4158 aa7.81□□□□□ -1.16
DCLK2-201ENST00000296550 VPS13BQ7Z7G8 4022 aa7.8□□□□□ -1.16
DCLK2-201ENST00000296550 TNP1P09430 55 aa7.8□□□□□ -1.16
DCLK2-201ENST00000296550 SACSQ9NZJ4 4579 aa7.75□□□□□ -1.17
DCLK2-201ENST00000296550 KRTAP10-10P60014 251 aa7.72□□□□□ -1.17
DCLK2-201ENST00000296550 PP632Q6XCG6 107 aa7.7□□□□□ -1.18
DCLK2-201ENST00000296550 FAT2Q9NYQ8 4349 aa7.68□□□□□ -1.18
DCLK2-201ENST00000296550 HYDINQ4G0P3 5121 aa7.63□□□□□ -1.19
DCLK2-201ENST00000296550 MYCBP2O75592 4640 aa7.6□□□□□ -1.19
DCLK2-201ENST00000296550 RYR1P21817 5038 aa7.56□□□□□ -1.2
DCLK2-201ENST00000296550 KIAA1109Q2LD37 5005 aa7.55□□□□□ -1.2
DCLK2-201ENST00000296550 APOBP04114 4563 aaKnown RBP7.53□□□□□ -1.2
DCLK2-201ENST00000296550 LRP1Q07954 4544 aaKnown RBP7.52□□□□□ -1.21
DCLK2-201ENST00000296550 PKHD1P08F94 4074 aa7.5□□□□□ -1.21
DCLK2-201ENST00000296550 RYR3Q15413 4870 aa7.42□□□□□ -1.22
DCLK2-201ENST00000296550 KRTAP17-1Q9BYP8 105 aa7.4□□□□□ -1.22
DCLK2-201ENST00000296550 LORP23490 312 aaPredicted RBP7.4□□□□□ -1.22
DCLK2-201ENST00000296550 RYR2Q92736 4967 aa7.37□□□□□ -1.23
DCLK2-201ENST00000296550 PKD1P98161 4303 aa7.35□□□□□ -1.23
DCLK2-201ENST00000296550 FAT3Q8TDW7 4589 aa7.33□□□□□ -1.24
DCLK2-201ENST00000296550 KRTAP4-1Q9BYQ7 146 aa7.32□□□□□ -1.24
DCLK2-201ENST00000296550 PRO2289Q9P1D8 64 aa7.27□□□□□ -1.24
DCLK2-201ENST00000296550 KMT2CQ8NEZ4 4911 aaKnown RBP7.2□□□□□ -1.26
DCLK2-201ENST00000296550 LRP2P98164 4655 aa7.16□□□□□ -1.26
DCLK2-201ENST00000296550 HSPG2P98160 4391 aa7.14□□□□□ -1.27
DCLK2-201ENST00000296550 HERC2O95714 4834 aa6.99□□□□□ -1.29
DCLK2-201ENST00000296550 PKHD1L1Q86WI1 4243 aa6.98□□□□□ -1.29
DCLK2-201ENST00000296550 TNXBP22105 4242 aa6.9□□□□□ -1.3
DCLK2-201ENST00000296550 LPAP08519 4548 aa6.87□□□□□ -1.31
DCLK2-201ENST00000296550 KRTAP23-1A1A580 65 aa6.85□□□□□ -1.31
DCLK2-201ENST00000296550 MT1HP80294 61 aa6.81□□□□□ -1.32
DCLK2-201ENST00000296550 LCE3AQ5TA76 89 aa6.81□□□□□ -1.32
DCLK2-201ENST00000296550 KRTAP10-12P60413 245 aa6.78□□□□□ -1.32
DCLK2-201ENST00000296550 EPPK1P58107 5090 aaKnown RBP6.76□□□□□ -1.33
DCLK2-201ENST00000296550 SPRR2GQ9BYE4 73 aa6.76□□□□□ -1.33
DCLK2-201ENST00000296550 MT2AP02795 61 aa6.73□□□□□ -1.33
DCLK2-201ENST00000296550 BIRC6Q9NR09 4857 aa6.71□□□□□ -1.34
DCLK2-201ENST00000296550 KRTAP12-3P60328 96 aa6.67□□□□□ -1.34
DCLK2-201ENST00000296550 MT1FP04733 61 aa6.67□□□□□ -1.34
DCLK2-201ENST00000296550 ABCA13Q86UQ4 5058 aa6.63□□□□□ -1.35
DCLK2-201ENST00000296550 KRTAP19-1Q8IUB9 90 aa6.6□□□□□ -1.35
DCLK2-201ENST00000296550 KRTAP19-2Q3LHN2 52 aa6.59□□□□□ -1.35
DCLK2-201ENST00000296550 INE1O15225 51 aa6.53□□□□□ -1.36
DCLK2-201ENST00000296550 LCE2CQ5TA81 110 aa6.52□□□□□ -1.37
DCLK2-201ENST00000296550 HERC1Q15751 4861 aa6.51□□□□□ -1.37
DCLK2-201ENST00000296550 PCLOQ9Y6V0 5065 aa6.49□□□□□ -1.37
DCLK2-201ENST00000296550 SPRR5A0A1B0GTR4 108 aa6.48□□□□□ -1.37
DCLK2-201ENST00000296550 MUC17Q685J3 4493 aa6.47□□□□□ -1.37
DCLK2-201ENST00000296550 CRCT1Q9UGL9 99 aa6.45□□□□□ -1.38
DCLK2-201ENST00000296550 KRTAP19-8Q3LI54 63 aa6.38□□□□□ -1.39
DCLK2-201ENST00000296550 KRTAP8-1Q8IUC2 63 aa6.37□□□□□ -1.39
DCLK2-201ENST00000296550 KRTAP9-8Q9BYQ0 159 aa6.37□□□□□ -1.39
DCLK2-201ENST00000296550 FLGP20930 4061 aaPredicted RBP6.36□□□□□ -1.39
DCLK2-201ENST00000296550 MUC2Q02817 5179 aa6.3□□□□□ -1.4
DCLK2-201ENST00000296550 MT1BP07438 61 aa6.28□□□□□ -1.4
DCLK2-201ENST00000296550 MT1XP80297 61 aa6.26□□□□□ -1.41
DCLK2-201ENST00000296550 KRTAP10-5P60370 271 aa6.23□□□□□ -1.41
DCLK2-201ENST00000296550 KRTAP10-7P60409 375 aaPredicted RBP6.23□□□□□ -1.41
DCLK2-201ENST00000296550 KRTAP19-5Q3LI72 72 aa6.17□□□□□ -1.42
DCLK2-201ENST00000296550 FAT4Q6V0I7 4981 aa6.16□□□□□ -1.42
DCLK2-201ENST00000296550 KRTAP9-3Q9BYQ3 159 aa6.14□□□□□ -1.43
DCLK2-201ENST00000296550 RNF213Q63HN8 5207 aa6.12□□□□□ -1.43
DCLK2-201ENST00000296550 HMCN2Q8NDA2 5059 aa6.11□□□□□ -1.43
DCLK2-201ENST00000296550 LCE3CQ5T5A8 94 aa6.03□□□□□ -1.44
DCLK2-201ENST00000296550 UBR4Q5T4S7 5183 aa6.01□□□□□ -1.45
DCLK2-201ENST00000296550 KRTAP4-8A0A0G2JLE6 195 aa5.92□□□□□ -1.46
DCLK2-201ENST00000296550 KRTAP4-8Q9BYQ9 185 aa5.92□□□□□ -1.46
DCLK2-201ENST00000296550 LCE2BO14633 110 aa5.91□□□□□ -1.46
DCLK2-201ENST00000296550 SYNE1Q8NF91 8797 aaKnown RBP5.91□□□□□ -1.46
DCLK2-201ENST00000296550 FSIP2Q5CZC0 6907 aa5.86□□□□□ -1.47
DCLK2-201ENST00000296550 SPRR2FQ96RM1 72 aa5.83□□□□□ -1.48
DCLK2-201ENST00000296550 KRTAP19-4Q3LI73 84 aa5.72□□□□□ -1.49
DCLK2-201ENST00000296550 LCE2AQ5TA79 106 aaPredicted RBP5.66□□□□□ -1.5
DCLK2-201ENST00000296550 OBSCNQ5VST9 7968 aa5.64□□□□□ -1.51
DCLK2-201ENST00000296550 KRTAP4-7Q9BYR0 210 aa5.62□□□□□ -1.51
DCLK2-201ENST00000296550 MT1LQ93083 61 aa5.53□□□□□ -1.52
DCLK2-201ENST00000296550 MT1EP04732 61 aa5.51□□□□□ -1.53
DCLK2-201ENST00000296550 MT1GP13640 62 aa5.49□□□□□ -1.53
DCLK2-201ENST00000296550 KRTAP19-7Q3SYF9 63 aa5.46□□□□□ -1.54
DCLK2-201ENST00000296550 KRTAP19-6Q3LI70 58 aa5.41□□□□□ -1.54
DCLK2-201ENST00000296550 USH2AO75445 5202 aa5.39□□□□□ -1.55
DCLK2-201ENST00000296550 SPRR2EP22531 72 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms