RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 DNAH5Q8TE73 4624 aa7.51□□□□□ -1.21
CDCP1-201ENST00000296129 PLECQ15149 4684 aaKnown RBP7.48□□□□□ -1.21
CDCP1-201ENST00000296129 LORP23490 312 aaPredicted RBP7.47□□□□□ -1.21
CDCP1-201ENST00000296129 VPS13DQ5THJ4 4388 aa7.37□□□□□ -1.23
CDCP1-201ENST00000296129 CRCT1Q9UGL9 99 aa7.37□□□□□ -1.23
CDCP1-201ENST00000296129 DNAH10Q8IVF4 4471 aa7.37□□□□□ -1.23
CDCP1-201ENST00000296129 DNAH17Q9UFH2 4485 aa7.37□□□□□ -1.23
CDCP1-201ENST00000296129 LCE3AQ5TA76 89 aa7.36□□□□□ -1.23
CDCP1-201ENST00000296129 KRTAP12-3P60328 96 aa7.35□□□□□ -1.23
CDCP1-201ENST00000296129 DNAH11Q96DT5 4516 aa7.32□□□□□ -1.24
CDCP1-201ENST00000296129 DNAH3Q8TD57 4116 aa7.28□□□□□ -1.24
CDCP1-201ENST00000296129 DNAH2Q9P225 4427 aa7.26□□□□□ -1.25
CDCP1-201ENST00000296129 KRTAP23-1A1A580 65 aa7.26□□□□□ -1.25
CDCP1-201ENST00000296129 KRTAP4-1Q9BYQ7 146 aa7.26□□□□□ -1.25
CDCP1-201ENST00000296129 STARD9Q9P2P6 4700 aa7.19□□□□□ -1.26
CDCP1-201ENST00000296129 DYNC1H1Q14204 4646 aaKnown RBP7.17□□□□□ -1.26
CDCP1-201ENST00000296129 INE1O15225 51 aa7.16□□□□□ -1.26
CDCP1-201ENST00000296129 LRP1BQ9NZR2 4599 aa7.16□□□□□ -1.26
CDCP1-201ENST00000296129 DNHD1Q96M86 4753 aa7.15□□□□□ -1.26
CDCP1-201ENST00000296129 FAT2Q9NYQ8 4349 aa7.12□□□□□ -1.27
CDCP1-201ENST00000296129 DYNC2H1Q8NCM8 4307 aaKnown RBP7.11□□□□□ -1.27
CDCP1-201ENST00000296129 MT1HP80294 61 aa7.11□□□□□ -1.27
CDCP1-201ENST00000296129 SACSQ9NZJ4 4579 aa7.07□□□□□ -1.28
CDCP1-201ENST00000296129 ANK2Q01484 3957 aa7.03□□□□□ -1.28
CDCP1-201ENST00000296129 DNAH8Q96JB1 4490 aa7.02□□□□□ -1.29
CDCP1-201ENST00000296129 KRTAP8-1Q8IUC2 63 aa7.01□□□□□ -1.29
CDCP1-201ENST00000296129 FAT1Q14517 4588 aa7.01□□□□□ -1.29
CDCP1-201ENST00000296129 PRKDCP78527 4128 aaKnown RBP6.98□□□□□ -1.29
CDCP1-201ENST00000296129 MT2AP02795 61 aa6.97□□□□□ -1.29
CDCP1-201ENST00000296129 KMT2AQ03164 3969 aa6.95□□□□□ -1.3
CDCP1-201ENST00000296129 CMYA5Q8N3K9 4069 aa6.91□□□□□ -1.3
CDCP1-201ENST00000296129 SPRR2GQ9BYE4 73 aa6.89□□□□□ -1.31
CDCP1-201ENST00000296129 DNAH6Q9C0G6 4158 aa6.87□□□□□ -1.31
CDCP1-201ENST00000296129 RYR1P21817 5038 aa6.87□□□□□ -1.31
CDCP1-201ENST00000296129 VPS13BQ7Z7G8 4022 aa6.85□□□□□ -1.31
CDCP1-201ENST00000296129 MT1FP04733 61 aa6.85□□□□□ -1.31
CDCP1-201ENST00000296129 APOBP04114 4563 aaKnown RBP6.8□□□□□ -1.32
CDCP1-201ENST00000296129 DNAH7Q8WXX0 4024 aa6.78□□□□□ -1.32
CDCP1-201ENST00000296129 KRTAP10-5P60370 271 aa6.76□□□□□ -1.33
CDCP1-201ENST00000296129 FRAS1Q86XX4 4008 aa6.74□□□□□ -1.33
CDCP1-201ENST00000296129 KRTAP17-1Q9BYP8 105 aa6.71□□□□□ -1.33
CDCP1-201ENST00000296129 LYSTQ99698 3801 aa6.68□□□□□ -1.34
CDCP1-201ENST00000296129 RYR3Q15413 4870 aa6.65□□□□□ -1.35
CDCP1-201ENST00000296129 KRTAP19-5Q3LI72 72 aa6.64□□□□□ -1.35
CDCP1-201ENST00000296129 HECTD4Q9Y4D8 3996 aa6.62□□□□□ -1.35
CDCP1-201ENST00000296129 FAT3Q8TDW7 4589 aa6.55□□□□□ -1.36
CDCP1-201ENST00000296129 SPRR2FQ96RM1 72 aa6.53□□□□□ -1.36
CDCP1-201ENST00000296129 LCE3CQ5T5A8 94 aa6.48□□□□□ -1.37
CDCP1-201ENST00000296129 RYR2Q92736 4967 aa6.45□□□□□ -1.38
CDCP1-201ENST00000296129 MYCBP2O75592 4640 aa6.45□□□□□ -1.38
CDCP1-201ENST00000296129 KRTAP19-1Q8IUB9 90 aa6.44□□□□□ -1.38
CDCP1-201ENST00000296129 LRP1Q07954 4544 aaKnown RBP6.43□□□□□ -1.38
CDCP1-201ENST00000296129 KRTAP10-7P60409 375 aaPredicted RBP6.42□□□□□ -1.38
CDCP1-201ENST00000296129 KRTAP19-8Q3LI54 63 aa6.41□□□□□ -1.38
CDCP1-201ENST00000296129 KIAA1109Q2LD37 5005 aa6.39□□□□□ -1.39
CDCP1-201ENST00000296129 HSPG2P98160 4391 aa6.35□□□□□ -1.39
CDCP1-201ENST00000296129 HYDINQ4G0P3 5121 aa6.32□□□□□ -1.4
CDCP1-201ENST00000296129 MT1XP80297 61 aa6.3□□□□□ -1.4
CDCP1-201ENST00000296129 KRTAP9-8Q9BYQ0 159 aa6.25□□□□□ -1.41
CDCP1-201ENST00000296129 MT1BP07438 61 aa6.24□□□□□ -1.41
CDCP1-201ENST00000296129 HERC1Q15751 4861 aa6.21□□□□□ -1.42
CDCP1-201ENST00000296129 KRTAP19-4Q3LI73 84 aa6.21□□□□□ -1.42
CDCP1-201ENST00000296129 LCE2CQ5TA81 110 aa6.19□□□□□ -1.42
CDCP1-201ENST00000296129 PKHD1P08F94 4074 aa6.16□□□□□ -1.42
CDCP1-201ENST00000296129 BIRC6Q9NR09 4857 aa6.15□□□□□ -1.42
CDCP1-201ENST00000296129 SPRR2EP22531 72 aa6.15□□□□□ -1.43
CDCP1-201ENST00000296129 SPRR2BP35325 72 aa6.15□□□□□ -1.43
CDCP1-201ENST00000296129 SPRR2AP35326 72 aa6.15□□□□□ -1.43
CDCP1-201ENST00000296129 PKHD1L1Q86WI1 4243 aa6.14□□□□□ -1.43
CDCP1-201ENST00000296129 PKD1P98161 4303 aa6.13□□□□□ -1.43
CDCP1-201ENST00000296129 HERC2O95714 4834 aa6.12□□□□□ -1.43
CDCP1-201ENST00000296129 LPAP08519 4548 aa6.11□□□□□ -1.43
CDCP1-201ENST00000296129 KRTAP9-3Q9BYQ3 159 aa6.1□□□□□ -1.43
CDCP1-201ENST00000296129 KRTAP4-8A0A0G2JLE6 195 aa6.06□□□□□ -1.44
CDCP1-201ENST00000296129 KRTAP4-8Q9BYQ9 185 aa6.06□□□□□ -1.44
CDCP1-201ENST00000296129 TNXBP22105 4242 aa6.05□□□□□ -1.44
CDCP1-201ENST00000296129 LRP2P98164 4655 aa6.04□□□□□ -1.44
CDCP1-201ENST00000296129 MT1GP13640 62 aa6.02□□□□□ -1.45
CDCP1-201ENST00000296129 LCE3BQ5TA77 95 aa5.99□□□□□ -1.45
CDCP1-201ENST00000296129 SPRR2DP22532 72 aa5.94□□□□□ -1.46
CDCP1-201ENST00000296129 KRTAP19-2Q3LHN2 52 aa5.91□□□□□ -1.46
CDCP1-201ENST00000296129 LCE2BO14633 110 aa5.9□□□□□ -1.46
CDCP1-201ENST00000296129 PCLOQ9Y6V0 5065 aa5.88□□□□□ -1.47
CDCP1-201ENST00000296129 KMT2CQ8NEZ4 4911 aaKnown RBP5.87□□□□□ -1.47
CDCP1-201ENST00000296129 SPRR5A0A1B0GTR4 108 aa5.84□□□□□ -1.47
CDCP1-201ENST00000296129 MUC17Q685J3 4493 aa5.79□□□□□ -1.48
CDCP1-201ENST00000296129 KRTAP12-4P60329 112 aa5.75□□□□□ -1.49
CDCP1-201ENST00000296129 FLGP20930 4061 aaPredicted RBP5.74□□□□□ -1.49
CDCP1-201ENST00000296129 KRTAP4-7Q9BYR0 210 aa5.71□□□□□ -1.5
CDCP1-201ENST00000296129 KRTAP19-3Q7Z4W3 81 aa5.7□□□□□ -1.5
CDCP1-201ENST00000296129 MT1LQ93083 61 aa5.68□□□□□ -1.5
CDCP1-201ENST00000296129 MT1EP04732 61 aa5.65□□□□□ -1.51
CDCP1-201ENST00000296129 EPPK1P58107 5090 aaKnown RBP5.59□□□□□ -1.51
CDCP1-201ENST00000296129 LCE3DQ9BYE3 92 aa5.58□□□□□ -1.52
CDCP1-201ENST00000296129 ABCA13Q86UQ4 5058 aa5.54□□□□□ -1.52
CDCP1-201ENST00000296129 KRTAP19-6Q3LI70 58 aa5.5□□□□□ -1.53
CDCP1-201ENST00000296129 LCE3EQ5T5B0 92 aa5.48□□□□□ -1.53
CDCP1-201ENST00000296129 KRTAP9-2Q9BYQ4 174 aa5.47□□□□□ -1.53
CDCP1-201ENST00000296129 MT1MQ8N339 61 aa5.46□□□□□ -1.53
CDCP1-201ENST00000296129 LOC100996750A0A140TA64 210 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms