RNA–Protein interactions for RNA: ENST00000295887.5

CDS1-201, Transcript of CDP-diacylglycerol synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDS1, Length 4,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDS1-201ENST00000295887 MT1HL1P0DM35 61 aa7.98□□□□□ -1.13
CDS1-201ENST00000295887 KRTAP4-5Q9BYR2 181 aa7.98□□□□□ -1.13
CDS1-201ENST00000295887 FAT1Q14517 4588 aa7.98□□□□□ -1.13
CDS1-201ENST00000295887 KRTAP3-2Q9BYR7 98 aa7.96□□□□□ -1.14
CDS1-201ENST00000295887 VPS13DQ5THJ4 4388 aa7.93□□□□□ -1.14
CDS1-201ENST00000295887 KMT2AQ03164 3969 aa7.87□□□□□ -1.15
CDS1-201ENST00000295887 KRTAP10-10P60014 251 aa7.86□□□□□ -1.15
CDS1-201ENST00000295887 LRP1BQ9NZR2 4599 aa7.83□□□□□ -1.16
CDS1-201ENST00000295887 LYSTQ99698 3801 aa7.83□□□□□ -1.16
CDS1-201ENST00000295887 DYNC1H1Q14204 4646 aaKnown RBP7.83□□□□□ -1.16
CDS1-201ENST00000295887 DNAH17Q9UFH2 4485 aa7.8□□□□□ -1.16
CDS1-201ENST00000295887 DNAH8Q96JB1 4490 aa7.79□□□□□ -1.16
CDS1-201ENST00000295887 DNAH2Q9P225 4427 aa7.74□□□□□ -1.17
CDS1-201ENST00000295887 ALMS1Q8TCU4 4167 aa7.73□□□□□ -1.17
CDS1-201ENST00000295887 RYR1P21817 5038 aa7.71□□□□□ -1.18
CDS1-201ENST00000295887 KIAA1109Q2LD37 5005 aa7.7□□□□□ -1.18
CDS1-201ENST00000295887 CMYA5Q8N3K9 4069 aa7.64□□□□□ -1.19
CDS1-201ENST00000295887 MYCBP2O75592 4640 aa7.64□□□□□ -1.19
CDS1-201ENST00000295887 DNAH3Q8TD57 4116 aa7.63□□□□□ -1.19
CDS1-201ENST00000295887 KRTAP15-1Q3LI76 137 aa7.58□□□□□ -1.2
CDS1-201ENST00000295887 DNAH7Q8WXX0 4024 aa7.58□□□□□ -1.2
CDS1-201ENST00000295887 SACSQ9NZJ4 4579 aa7.55□□□□□ -1.2
CDS1-201ENST00000295887 DYNC2H1Q8NCM8 4307 aaKnown RBP7.55□□□□□ -1.2
CDS1-201ENST00000295887 VPS13BQ7Z7G8 4022 aa7.52□□□□□ -1.21
CDS1-201ENST00000295887 RYR3Q15413 4870 aa7.52□□□□□ -1.21
CDS1-201ENST00000295887 DNAH6Q9C0G6 4158 aa7.52□□□□□ -1.21
CDS1-201ENST00000295887 FRAS1Q86XX4 4008 aa7.51□□□□□ -1.21
CDS1-201ENST00000295887 LORP23490 312 aaPredicted RBP7.5□□□□□ -1.21
CDS1-201ENST00000295887 LRP1Q07954 4544 aaKnown RBP7.46□□□□□ -1.22
CDS1-201ENST00000295887 FAT3Q8TDW7 4589 aa7.45□□□□□ -1.22
CDS1-201ENST00000295887 HYDINQ4G0P3 5121 aa7.44□□□□□ -1.22
CDS1-201ENST00000295887 FAT2Q9NYQ8 4349 aa7.44□□□□□ -1.22
CDS1-201ENST00000295887 APOBP04114 4563 aaKnown RBP7.44□□□□□ -1.22
CDS1-201ENST00000295887 PRO2289Q9P1D8 64 aa7.43□□□□□ -1.22
CDS1-201ENST00000295887 KRTAP17-1Q9BYP8 105 aa7.35□□□□□ -1.23
CDS1-201ENST00000295887 HECTD4Q9Y4D8 3996 aa7.34□□□□□ -1.23
CDS1-201ENST00000295887 PKHD1P08F94 4074 aa7.33□□□□□ -1.24
CDS1-201ENST00000295887 KRTAP4-1Q9BYQ7 146 aa7.27□□□□□ -1.25
CDS1-201ENST00000295887 RYR2Q92736 4967 aa7.25□□□□□ -1.25
CDS1-201ENST00000295887 KMT2CQ8NEZ4 4911 aaKnown RBP7.25□□□□□ -1.25
CDS1-201ENST00000295887 LRP2P98164 4655 aa7.11□□□□□ -1.27
CDS1-201ENST00000295887 HERC2O95714 4834 aa7.11□□□□□ -1.27
CDS1-201ENST00000295887 LCE3AQ5TA76 89 aa7.03□□□□□ -1.28
CDS1-201ENST00000295887 KRTAP10-12P60413 245 aa7.02□□□□□ -1.29
CDS1-201ENST00000295887 HSPG2P98160 4391 aa6.96□□□□□ -1.29
CDS1-201ENST00000295887 PKD1P98161 4303 aa6.96□□□□□ -1.3
CDS1-201ENST00000295887 KRTAP12-3P60328 96 aa6.93□□□□□ -1.3
CDS1-201ENST00000295887 KRTAP23-1A1A580 65 aa6.92□□□□□ -1.3
CDS1-201ENST00000295887 EPPK1P58107 5090 aaKnown RBP6.86□□□□□ -1.31
CDS1-201ENST00000295887 MT1HP80294 61 aa6.81□□□□□ -1.32
CDS1-201ENST00000295887 LPAP08519 4548 aa6.81□□□□□ -1.32
CDS1-201ENST00000295887 BIRC6Q9NR09 4857 aa6.76□□□□□ -1.33
CDS1-201ENST00000295887 MT2AP02795 61 aa6.72□□□□□ -1.33
CDS1-201ENST00000295887 SPRR2GQ9BYE4 73 aa6.71□□□□□ -1.33
CDS1-201ENST00000295887 ABCA13Q86UQ4 5058 aa6.7□□□□□ -1.34
CDS1-201ENST00000295887 INE1O15225 51 aa6.7□□□□□ -1.34
CDS1-201ENST00000295887 MT1FP04733 61 aa6.66□□□□□ -1.34
CDS1-201ENST00000295887 PCLOQ9Y6V0 5065 aa6.66□□□□□ -1.34
CDS1-201ENST00000295887 CRCT1Q9UGL9 99 aa6.58□□□□□ -1.36
CDS1-201ENST00000295887 HERC1Q15751 4861 aa6.54□□□□□ -1.36
CDS1-201ENST00000295887 PKHD1L1Q86WI1 4243 aa6.53□□□□□ -1.36
CDS1-201ENST00000295887 KRTAP19-1Q8IUB9 90 aa6.53□□□□□ -1.36
CDS1-201ENST00000295887 TNXBP22105 4242 aa6.51□□□□□ -1.37
CDS1-201ENST00000295887 KRTAP8-1Q8IUC2 63 aa6.43□□□□□ -1.38
CDS1-201ENST00000295887 MUC2Q02817 5179 aa6.39□□□□□ -1.39
CDS1-201ENST00000295887 RNF213Q63HN8 5207 aa6.39□□□□□ -1.39
CDS1-201ENST00000295887 LCE2CQ5TA81 110 aa6.38□□□□□ -1.39
CDS1-201ENST00000295887 KRTAP19-5Q3LI72 72 aa6.32□□□□□ -1.4
CDS1-201ENST00000295887 KRTAP10-7P60409 375 aaPredicted RBP6.29□□□□□ -1.4
CDS1-201ENST00000295887 FSIP2Q5CZC0 6907 aa6.29□□□□□ -1.4
CDS1-201ENST00000295887 KRTAP19-8Q3LI54 63 aa6.27□□□□□ -1.41
CDS1-201ENST00000295887 KRTAP9-8Q9BYQ0 159 aa6.27□□□□□ -1.41
CDS1-201ENST00000295887 KRTAP19-2Q3LHN2 52 aa6.26□□□□□ -1.41
CDS1-201ENST00000295887 UBR4Q5T4S7 5183 aa6.26□□□□□ -1.41
CDS1-201ENST00000295887 FAT4Q6V0I7 4981 aa6.24□□□□□ -1.41
CDS1-201ENST00000295887 MUC17Q685J3 4493 aa6.24□□□□□ -1.41
CDS1-201ENST00000295887 MT1XP80297 61 aa6.23□□□□□ -1.41
CDS1-201ENST00000295887 MT1BP07438 61 aa6.21□□□□□ -1.42
CDS1-201ENST00000295887 KRTAP10-5P60370 271 aa6.19□□□□□ -1.42
CDS1-201ENST00000295887 LCE3CQ5T5A8 94 aa6.18□□□□□ -1.42
CDS1-201ENST00000295887 SPRR5A0A1B0GTR4 108 aa6.15□□□□□ -1.42
CDS1-201ENST00000295887 FLGP20930 4061 aaPredicted RBP6.11□□□□□ -1.43
CDS1-201ENST00000295887 HMCN2Q8NDA2 5059 aa6.06□□□□□ -1.44
CDS1-201ENST00000295887 KRTAP9-3Q9BYQ3 159 aa6.05□□□□□ -1.44
CDS1-201ENST00000295887 KRTAP4-8A0A0G2JLE6 195 aa6.01□□□□□ -1.45
CDS1-201ENST00000295887 KRTAP4-8Q9BYQ9 185 aa6.01□□□□□ -1.45
CDS1-201ENST00000295887 SPRR2FQ96RM1 72 aa5.95□□□□□ -1.46
CDS1-201ENST00000295887 LCE2BO14633 110 aa5.91□□□□□ -1.46
CDS1-201ENST00000295887 KRTAP4-7Q9BYR0 210 aa5.76□□□□□ -1.49
CDS1-201ENST00000295887 KRTAP9-2Q9BYQ4 174 aa5.73□□□□□ -1.49
CDS1-201ENST00000295887 KRTAP19-4Q3LI73 84 aa5.7□□□□□ -1.5
CDS1-201ENST00000295887 SYNE1Q8NF91 8797 aaKnown RBP5.69□□□□□ -1.5
CDS1-201ENST00000295887 MT1GP13640 62 aa5.69□□□□□ -1.5
CDS1-201ENST00000295887 LCE2AQ5TA79 106 aaPredicted RBP5.62□□□□□ -1.51
CDS1-201ENST00000295887 USH2AO75445 5202 aa5.59□□□□□ -1.51
CDS1-201ENST00000295887 LCE3BQ5TA77 95 aa5.57□□□□□ -1.52
CDS1-201ENST00000295887 KRTAP9-6A0A140TA67 174 aa5.57□□□□□ -1.52
CDS1-201ENST00000295887 KRTAP12-4P60329 112 aa5.56□□□□□ -1.52
CDS1-201ENST00000295887 MT1LQ93083 61 aa5.54□□□□□ -1.52
CDS1-201ENST00000295887 OBSCNQ5VST9 7968 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms