RNA–Protein interactions for RNA: ENST00000295598.9

ATP1A1-201, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATP1A1, Length 3,654 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-201ENST00000295598 TNXBP22105 4242 aa6.78□□□□□ -1.32
ATP1A1-201ENST00000295598 KRTAP10-8P60410 259 aa6.77□□□□□ -1.33
ATP1A1-201ENST00000295598 EPPK1P58107 5090 aaKnown RBP6.76□□□□□ -1.33
ATP1A1-201ENST00000295598 A0A0D9SG42 100 aa6.75□□□□□ -1.33
ATP1A1-201ENST00000295598 CSAG1Q6PB30 78 aa6.75□□□□□ -1.33
ATP1A1-201ENST00000295598 A0A1B0GU33 70 aa6.75□□□□□ -1.33
ATP1A1-201ENST00000295598 RPS29P62273 56 aaKnown RBP6.74□□□□□ -1.33
ATP1A1-201ENST00000295598 COX6B2Q6YFQ2 88 aa6.7□□□□□ -1.34
ATP1A1-201ENST00000295598 ABCA13Q86UQ4 5058 aa6.69□□□□□ -1.34
ATP1A1-201ENST00000295598 KRTAP21-3Q3LHN1 58 aa6.66□□□□□ -1.34
ATP1A1-201ENST00000295598 H1FX-AS1Q4G0G2 97 aa6.66□□□□□ -1.34
ATP1A1-201ENST00000295598 XP32Q5T750 250 aa6.66□□□□□ -1.34
ATP1A1-201ENST00000295598 KRTAP13-4Q3LI77 160 aa6.59□□□□□ -1.35
ATP1A1-201ENST00000295598 RPL37P61927 97 aaKnown RBP6.58□□□□□ -1.36
ATP1A1-201ENST00000295598 KRTAP3-3Q9BYR6 98 aa6.58□□□□□ -1.36
ATP1A1-201ENST00000295598 P0C880 135 aa6.57□□□□□ -1.36
ATP1A1-201ENST00000295598 KRTAP4-5Q9BYR2 181 aa6.57□□□□□ -1.36
ATP1A1-201ENST00000295598 LINC01554Q52M75 96 aa6.55□□□□□ -1.36
ATP1A1-201ENST00000295598 MUC2Q02817 5179 aa6.54□□□□□ -1.36
ATP1A1-201ENST00000295598 S4R3F8 94 aa6.54□□□□□ -1.36
ATP1A1-201ENST00000295598 MT1HL1P0DM35 61 aa6.53□□□□□ -1.36
ATP1A1-201ENST00000295598 KRTAP10-6P60371 365 aaPredicted RBP6.52□□□□□ -1.37
ATP1A1-201ENST00000295598 KRTAP3-2Q9BYR7 98 aa6.46□□□□□ -1.37
ATP1A1-201ENST00000295598 SPINT4Q6UDR6 99 aa6.46□□□□□ -1.38
ATP1A1-201ENST00000295598 K7ERS5 55 aa6.44□□□□□ -1.38
ATP1A1-201ENST00000295598 C10orf95Q9H7T3 257 aa6.44□□□□□ -1.38
ATP1A1-201ENST00000295598 KRTAP25-1Q3LHN0 102 aa6.38□□□□□ -1.39
ATP1A1-201ENST00000295598 KRTAP12-2P59991 146 aa6.36□□□□□ -1.39
ATP1A1-201ENST00000295598 HERC2O95714 4834 aa6.36□□□□□ -1.39
ATP1A1-201ENST00000295598 ROMO1P60602 79 aa6.31□□□□□ -1.4
ATP1A1-201ENST00000295598 TPRXLQ17RH7 258 aa6.27□□□□□ -1.41
ATP1A1-201ENST00000295598 J3QL48 77 aa6.27□□□□□ -1.41
ATP1A1-201ENST00000295598 HERC1Q15751 4861 aa6.26□□□□□ -1.41
ATP1A1-201ENST00000295598 KRTAP4-1Q9BYQ7 146 aa6.24□□□□□ -1.41
ATP1A1-201ENST00000295598 M0QZ58 72 aa6.23□□□□□ -1.41
ATP1A1-201ENST00000295598 LORP23490 312 aaPredicted RBP6.23□□□□□ -1.41
ATP1A1-201ENST00000295598 KRTAP12-1P59990 96 aa6.21□□□□□ -1.42
ATP1A1-201ENST00000295598 FAT4Q6V0I7 4981 aa6.2□□□□□ -1.42
ATP1A1-201ENST00000295598 R4GN34 69 aa6.16□□□□□ -1.42
ATP1A1-201ENST00000295598 MUC17Q685J3 4493 aa6.15□□□□□ -1.43
ATP1A1-201ENST00000295598 RNF213Q63HN8 5207 aa6.12□□□□□ -1.43
ATP1A1-201ENST00000295598 H3BS24 57 aa6.1□□□□□ -1.43
ATP1A1-201ENST00000295598 SEC61BP60468 96 aaKnown RBP6.06□□□□□ -1.44
ATP1A1-201ENST00000295598 PCLOQ9Y6V0 5065 aa6.06□□□□□ -1.44
ATP1A1-201ENST00000295598 UBR4Q5T4S7 5183 aa5.95□□□□□ -1.46
ATP1A1-201ENST00000295598 CAMK2N1Q7Z7J9 78 aa5.91□□□□□ -1.46
ATP1A1-201ENST00000295598 BIRC6Q9NR09 4857 aa5.91□□□□□ -1.46
ATP1A1-201ENST00000295598 NDUFAF8A1L188 74 aa5.9□□□□□ -1.47
ATP1A1-201ENST00000295598 KRTAP19-2Q3LHN2 52 aa5.86□□□□□ -1.47
ATP1A1-201ENST00000295598 HMCN2Q8NDA2 5059 aa5.86□□□□□ -1.47
ATP1A1-201ENST00000295598 FLGP20930 4061 aaPredicted RBP5.81□□□□□ -1.48
ATP1A1-201ENST00000295598 M0R2T5 61 aa5.79□□□□□ -1.48
ATP1A1-201ENST00000295598 KRTAP15-1Q3LI76 137 aa5.78□□□□□ -1.48
ATP1A1-201ENST00000295598 PLAC4Q8WY50 150 aa5.64□□□□□ -1.51
ATP1A1-201ENST00000295598 LCE2CQ5TA81 110 aa5.6□□□□□ -1.51
ATP1A1-201ENST00000295598 KRTAP10-10P60014 251 aa5.55□□□□□ -1.52
ATP1A1-201ENST00000295598 USH2AO75445 5202 aa5.51□□□□□ -1.53
ATP1A1-201ENST00000295598 TNP1P09430 55 aa5.51□□□□□ -1.53
ATP1A1-201ENST00000295598 MT1HP80294 61 aa5.49□□□□□ -1.53
ATP1A1-201ENST00000295598 KRTAP19-1Q8IUB9 90 aa5.48□□□□□ -1.53
ATP1A1-201ENST00000295598 MT1FP04733 61 aa5.47□□□□□ -1.53
ATP1A1-201ENST00000295598 MT2AP02795 61 aa5.41□□□□□ -1.54
ATP1A1-201ENST00000295598 KMT2DO14686 5537 aa5.37□□□□□ -1.55
ATP1A1-201ENST00000295598 LUZP6Q538Z0 58 aa5.37□□□□□ -1.55
ATP1A1-201ENST00000295598 PP632Q6XCG6 107 aa5.36□□□□□ -1.55
ATP1A1-201ENST00000295598 LCE3AQ5TA76 89 aa5.35□□□□□ -1.55
ATP1A1-201ENST00000295598 SPRR2GQ9BYE4 73 aa5.34□□□□□ -1.55
ATP1A1-201ENST00000295598 KRTAP9-8Q9BYQ0 159 aa5.33□□□□□ -1.56
ATP1A1-201ENST00000295598 FSIP2Q5CZC0 6907 aa5.32□□□□□ -1.56
ATP1A1-201ENST00000295598 MT1BP07438 61 aa5.19□□□□□ -1.58
ATP1A1-201ENST00000295598 KRTAP10-5P60370 271 aa5.16□□□□□ -1.58
ATP1A1-201ENST00000295598 MT1XP80297 61 aa5.16□□□□□ -1.58
ATP1A1-201ENST00000295598 KRTAP10-7P60409 375 aaPredicted RBP5.15□□□□□ -1.58
ATP1A1-201ENST00000295598 KRTAP9-3Q9BYQ3 159 aa5.08□□□□□ -1.6
ATP1A1-201ENST00000295598 KRTAP10-12P60413 245 aa5.06□□□□□ -1.6
ATP1A1-201ENST00000295598 KRTAP19-8Q3LI54 63 aa5.06□□□□□ -1.6
ATP1A1-201ENST00000295598 KRTAP12-3P60328 96 aa5.02□□□□□ -1.61
ATP1A1-201ENST00000295598 LCE2BO14633 110 aa5.01□□□□□ -1.61
ATP1A1-201ENST00000295598 A0A0A0MQY5 61 aa4.99□□□□□ -1.61
ATP1A1-201ENST00000295598 KRTAP23-1A1A580 65 aa4.99□□□□□ -1.61
ATP1A1-201ENST00000295598 KRTAP4-8A0A0G2JLE6 195 aa4.99□□□□□ -1.61
ATP1A1-201ENST00000295598 KRTAP4-8Q9BYQ9 185 aa4.99□□□□□ -1.61
ATP1A1-201ENST00000295598 SPRR5A0A1B0GTR4 108 aa4.98□□□□□ -1.61
ATP1A1-201ENST00000295598 KRTAP8-1Q8IUC2 63 aa4.96□□□□□ -1.62
ATP1A1-201ENST00000295598 KRTAP19-5Q3LI72 72 aa4.9□□□□□ -1.63
ATP1A1-201ENST00000295598 PRO2289Q9P1D8 64 aa4.85□□□□□ -1.63
ATP1A1-201ENST00000295598 KRTAP4-7Q9BYR0 210 aa4.82□□□□□ -1.64
ATP1A1-201ENST00000295598 SSPOA2VEC9 5147 aa4.8□□□□□ -1.64
ATP1A1-201ENST00000295598 DSTQ03001 7570 aaKnown RBP4.78□□□□□ -1.64
ATP1A1-201ENST00000295598 LCE2AQ5TA79 106 aaPredicted RBP4.75□□□□□ -1.65
ATP1A1-201ENST00000295598 MUC12Q9UKN1 5478 aa4.72□□□□□ -1.65
ATP1A1-201ENST00000295598 FCGBPQ9Y6R7 5405 aaPredicted RBP4.67□□□□□ -1.66
ATP1A1-201ENST00000295598 LCE3CQ5T5A8 94 aa4.66□□□□□ -1.66
ATP1A1-201ENST00000295598 KRTAP9-6A8MVA2 160 aa4.65□□□□□ -1.66
ATP1A1-201ENST00000295598 KRTAP19-7Q3SYF9 63 aa4.59□□□□□ -1.67
ATP1A1-201ENST00000295598 CRCT1Q9UGL9 99 aa4.54□□□□□ -1.68
ATP1A1-201ENST00000295598 LCE2DQ5TA82 110 aaPredicted RBP4.53□□□□□ -1.68
ATP1A1-201ENST00000295598 KRTAP4-3Q9BYR4 195 aa4.53□□□□□ -1.68
ATP1A1-201ENST00000295598 SYNE1Q8NF91 8797 aaKnown RBP4.5□□□□□ -1.69
ATP1A1-201ENST00000295598 LOC100996750A0A140TA64 210 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms