RNA–Protein interactions for RNA: ENST00000290399.10

SIM2-201, Transcript of SIM bHLH transcription factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM2, Length 4,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM2-201ENST00000290399 KRTAP3-2Q9BYR7 98 aa8.61□□□□□ -1.03
SIM2-201ENST00000290399 STARD9Q9P2P6 4700 aa8.59□□□□□ -1.03
SIM2-201ENST00000290399 VPS13DQ5THJ4 4388 aa8.59□□□□□ -1.04
SIM2-201ENST00000290399 FAT1Q14517 4588 aa8.51□□□□□ -1.05
SIM2-201ENST00000290399 PRKDCP78527 4128 aaKnown RBP8.5□□□□□ -1.05
SIM2-201ENST00000290399 DNAH17Q9UFH2 4485 aa8.49□□□□□ -1.05
SIM2-201ENST00000290399 PRO2289Q9P1D8 64 aa8.45□□□□□ -1.06
SIM2-201ENST00000290399 ALMS1Q8TCU4 4167 aa8.45□□□□□ -1.06
SIM2-201ENST00000290399 LRP1BQ9NZR2 4599 aa8.42□□□□□ -1.06
SIM2-201ENST00000290399 DYNC1H1Q14204 4646 aaKnown RBP8.41□□□□□ -1.06
SIM2-201ENST00000290399 DNAH2Q9P225 4427 aa8.34□□□□□ -1.07
SIM2-201ENST00000290399 DNAH8Q96JB1 4490 aa8.32□□□□□ -1.08
SIM2-201ENST00000290399 KMT2AQ03164 3969 aa8.31□□□□□ -1.08
SIM2-201ENST00000290399 ANK2Q01484 3957 aa8.3□□□□□ -1.08
SIM2-201ENST00000290399 RYR1P21817 5038 aa8.22□□□□□ -1.09
SIM2-201ENST00000290399 LYSTQ99698 3801 aa8.21□□□□□ -1.09
SIM2-201ENST00000290399 DNAH3Q8TD57 4116 aa8.16□□□□□ -1.1
SIM2-201ENST00000290399 LORP23490 312 aaPredicted RBP8.15□□□□□ -1.11
SIM2-201ENST00000290399 KIAA1109Q2LD37 5005 aa8.14□□□□□ -1.11
SIM2-201ENST00000290399 DYNC2H1Q8NCM8 4307 aaKnown RBP8.13□□□□□ -1.11
SIM2-201ENST00000290399 MYCBP2O75592 4640 aa8.11□□□□□ -1.11
SIM2-201ENST00000290399 SACSQ9NZJ4 4579 aa8.1□□□□□ -1.11
SIM2-201ENST00000290399 VPS13BQ7Z7G8 4022 aa8.06□□□□□ -1.12
SIM2-201ENST00000290399 FAT2Q9NYQ8 4349 aa8.05□□□□□ -1.12
SIM2-201ENST00000290399 KRTAP4-1Q9BYQ7 146 aa8.02□□□□□ -1.13
SIM2-201ENST00000290399 CMYA5Q8N3K9 4069 aa7.99□□□□□ -1.13
SIM2-201ENST00000290399 KRTAP15-1Q3LI76 137 aa7.95□□□□□ -1.14
SIM2-201ENST00000290399 RYR3Q15413 4870 aa7.95□□□□□ -1.14
SIM2-201ENST00000290399 APOBP04114 4563 aaKnown RBP7.94□□□□□ -1.14
SIM2-201ENST00000290399 DNAH6Q9C0G6 4158 aa7.93□□□□□ -1.14
SIM2-201ENST00000290399 LRP1Q07954 4544 aaKnown RBP7.91□□□□□ -1.14
SIM2-201ENST00000290399 FRAS1Q86XX4 4008 aa7.91□□□□□ -1.14
SIM2-201ENST00000290399 DNAH7Q8WXX0 4024 aa7.9□□□□□ -1.14
SIM2-201ENST00000290399 FAT3Q8TDW7 4589 aa7.86□□□□□ -1.15
SIM2-201ENST00000290399 KRTAP17-1Q9BYP8 105 aa7.85□□□□□ -1.15
SIM2-201ENST00000290399 HECTD4Q9Y4D8 3996 aa7.83□□□□□ -1.16
SIM2-201ENST00000290399 KRTAP10-12P60413 245 aa7.79□□□□□ -1.16
SIM2-201ENST00000290399 HYDINQ4G0P3 5121 aa7.76□□□□□ -1.17
SIM2-201ENST00000290399 PKHD1P08F94 4074 aa7.67□□□□□ -1.18
SIM2-201ENST00000290399 LCE3AQ5TA76 89 aa7.67□□□□□ -1.18
SIM2-201ENST00000290399 RYR2Q92736 4967 aa7.65□□□□□ -1.18
SIM2-201ENST00000290399 KRTAP23-1A1A580 65 aa7.63□□□□□ -1.19
SIM2-201ENST00000290399 KRTAP12-3P60328 96 aa7.63□□□□□ -1.19
SIM2-201ENST00000290399 MT1HP80294 61 aa7.59□□□□□ -1.19
SIM2-201ENST00000290399 LRP2P98164 4655 aa7.57□□□□□ -1.2
SIM2-201ENST00000290399 HERC2O95714 4834 aa7.52□□□□□ -1.2
SIM2-201ENST00000290399 MT2AP02795 61 aa7.52□□□□□ -1.21
SIM2-201ENST00000290399 SPRR2GQ9BYE4 73 aa7.48□□□□□ -1.21
SIM2-201ENST00000290399 KMT2CQ8NEZ4 4911 aaKnown RBP7.45□□□□□ -1.22
SIM2-201ENST00000290399 MT1FP04733 61 aa7.42□□□□□ -1.22
SIM2-201ENST00000290399 HSPG2P98160 4391 aa7.38□□□□□ -1.23
SIM2-201ENST00000290399 PKD1P98161 4303 aa7.36□□□□□ -1.23
SIM2-201ENST00000290399 CRCT1Q9UGL9 99 aa7.27□□□□□ -1.25
SIM2-201ENST00000290399 KRTAP19-1Q8IUB9 90 aa7.22□□□□□ -1.25
SIM2-201ENST00000290399 INE1O15225 51 aa7.18□□□□□ -1.26
SIM2-201ENST00000290399 LPAP08519 4548 aa7.16□□□□□ -1.26
SIM2-201ENST00000290399 BIRC6Q9NR09 4857 aa7.14□□□□□ -1.27
SIM2-201ENST00000290399 KRTAP8-1Q8IUC2 63 aa7.09□□□□□ -1.27
SIM2-201ENST00000290399 PCLOQ9Y6V0 5065 aa7.07□□□□□ -1.28
SIM2-201ENST00000290399 LCE2CQ5TA81 110 aa7.04□□□□□ -1.28
SIM2-201ENST00000290399 EPPK1P58107 5090 aaKnown RBP7.03□□□□□ -1.28
SIM2-201ENST00000290399 KRTAP19-8Q3LI54 63 aa7.02□□□□□ -1.28
SIM2-201ENST00000290399 HERC1Q15751 4861 aa7.02□□□□□ -1.29
SIM2-201ENST00000290399 ABCA13Q86UQ4 5058 aa6.97□□□□□ -1.29
SIM2-201ENST00000290399 KRTAP9-8Q9BYQ0 159 aa6.97□□□□□ -1.29
SIM2-201ENST00000290399 KRTAP19-5Q3LI72 72 aa6.96□□□□□ -1.3
SIM2-201ENST00000290399 TNXBP22105 4242 aa6.95□□□□□ -1.3
SIM2-201ENST00000290399 PKHD1L1Q86WI1 4243 aa6.92□□□□□ -1.3
SIM2-201ENST00000290399 KRTAP10-7P60409 375 aaPredicted RBP6.91□□□□□ -1.3
SIM2-201ENST00000290399 KRTAP19-2Q3LHN2 52 aa6.9□□□□□ -1.3
SIM2-201ENST00000290399 MT1BP07438 61 aa6.89□□□□□ -1.31
SIM2-201ENST00000290399 MT1XP80297 61 aa6.88□□□□□ -1.31
SIM2-201ENST00000290399 KRTAP10-5P60370 271 aa6.82□□□□□ -1.32
SIM2-201ENST00000290399 MUC17Q685J3 4493 aa6.82□□□□□ -1.32
SIM2-201ENST00000290399 LCE3CQ5T5A8 94 aa6.78□□□□□ -1.32
SIM2-201ENST00000290399 KRTAP9-3Q9BYQ3 159 aa6.74□□□□□ -1.33
SIM2-201ENST00000290399 FLGP20930 4061 aaPredicted RBP6.67□□□□□ -1.34
SIM2-201ENST00000290399 SPRR2FQ96RM1 72 aa6.65□□□□□ -1.34
SIM2-201ENST00000290399 KRTAP4-8A0A0G2JLE6 195 aa6.61□□□□□ -1.35
SIM2-201ENST00000290399 KRTAP4-8Q9BYQ9 185 aa6.61□□□□□ -1.35
SIM2-201ENST00000290399 UBR4Q5T4S7 5183 aa6.55□□□□□ -1.36
SIM2-201ENST00000290399 MUC2Q02817 5179 aa6.54□□□□□ -1.36
SIM2-201ENST00000290399 SPRR5A0A1B0GTR4 108 aa6.53□□□□□ -1.36
SIM2-201ENST00000290399 FAT4Q6V0I7 4981 aa6.52□□□□□ -1.36
SIM2-201ENST00000290399 RNF213Q63HN8 5207 aa6.52□□□□□ -1.37
SIM2-201ENST00000290399 LCE2BO14633 110 aa6.5□□□□□ -1.37
SIM2-201ENST00000290399 KRTAP19-4Q3LI73 84 aa6.49□□□□□ -1.37
SIM2-201ENST00000290399 FSIP2Q5CZC0 6907 aa6.43□□□□□ -1.38
SIM2-201ENST00000290399 HMCN2Q8NDA2 5059 aa6.39□□□□□ -1.39
SIM2-201ENST00000290399 MT1GP13640 62 aa6.26□□□□□ -1.41
SIM2-201ENST00000290399 KRTAP4-7Q9BYR0 210 aa6.22□□□□□ -1.41
SIM2-201ENST00000290399 SYNE1Q8NF91 8797 aaKnown RBP6.17□□□□□ -1.42
SIM2-201ENST00000290399 LCE2AQ5TA79 106 aaPredicted RBP6.13□□□□□ -1.43
SIM2-201ENST00000290399 MT1LQ93083 61 aa6.13□□□□□ -1.43
SIM2-201ENST00000290399 MT1EP04732 61 aa6.11□□□□□ -1.43
SIM2-201ENST00000290399 SPRR2EP22531 72 aa6.11□□□□□ -1.43
SIM2-201ENST00000290399 SPRR2BP35325 72 aa6.11□□□□□ -1.43
SIM2-201ENST00000290399 SPRR2AP35326 72 aa6.11□□□□□ -1.43
SIM2-201ENST00000290399 LCE3BQ5TA77 95 aa6.11□□□□□ -1.43
SIM2-201ENST00000290399 KRTAP19-3Q7Z4W3 81 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms