RNA–Protein interactions for RNA: ENST00000288599.9

NCOA1-201, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-201ENST00000288599 KRTAP7-1Q8IUC3 87 aa2.35□□□□□ -2.03
NCOA1-201ENST00000288599 DNAH11Q96DT5 4516 aa2.34□□□□□ -2.03
NCOA1-201ENST00000288599 HECTD4Q9Y4D8 3996 aa2.34□□□□□ -2.03
NCOA1-201ENST00000288599 H0YAA0 97 aa2.33□□□□□ -2.04
NCOA1-201ENST00000288599 DNAH5Q8TE73 4624 aa2.32□□□□□ -2.04
NCOA1-201ENST00000288599 KMT2AQ03164 3969 aa2.31□□□□□ -2.04
NCOA1-201ENST00000288599 KRTAP15-1Q3LI76 137 aa2.3□□□□□ -2.04
NCOA1-201ENST00000288599 FAT2Q9NYQ8 4349 aa2.3□□□□□ -2.04
NCOA1-201ENST00000288599 DNAH6Q9C0G6 4158 aa2.29□□□□□ -2.04
NCOA1-201ENST00000288599 XP32Q5T750 250 aa2.29□□□□□ -2.04
NCOA1-201ENST00000288599 FRAS1Q86XX4 4008 aa2.28□□□□□ -2.04
NCOA1-201ENST00000288599 KRTAP12-2P59991 146 aa2.28□□□□□ -2.04
NCOA1-201ENST00000288599 PKD1P98161 4303 aa2.28□□□□□ -2.05
NCOA1-201ENST00000288599 KMT2CQ8NEZ4 4911 aaKnown RBP2.26□□□□□ -2.05
NCOA1-201ENST00000288599 SACSQ9NZJ4 4579 aa2.23□□□□□ -2.05
NCOA1-201ENST00000288599 ALMS1Q8TCU4 4167 aa2.23□□□□□ -2.05
NCOA1-201ENST00000288599 PKHD1P08F94 4074 aa2.23□□□□□ -2.05
NCOA1-201ENST00000288599 KRTAP13-2Q52LG2 175 aa2.22□□□□□ -2.05
NCOA1-201ENST00000288599 RYR2Q92736 4967 aa2.22□□□□□ -2.05
NCOA1-201ENST00000288599 LORP23490 312 aaPredicted RBP2.21□□□□□ -2.06
NCOA1-201ENST00000288599 FAT1Q14517 4588 aa2.2□□□□□ -2.06
NCOA1-201ENST00000288599 DYNC1H1Q14204 4646 aaKnown RBP2.2□□□□□ -2.06
NCOA1-201ENST00000288599 KRTAP13-1Q8IUC0 172 aa2.19□□□□□ -2.06
NCOA1-201ENST00000288599 KIAA1109Q2LD37 5005 aa2.19□□□□□ -2.06
NCOA1-201ENST00000288599 RYR3Q15413 4870 aa2.18□□□□□ -2.06
NCOA1-201ENST00000288599 RYR1P21817 5038 aa2.17□□□□□ -2.06
NCOA1-201ENST00000288599 VPS13BQ7Z7G8 4022 aa2.17□□□□□ -2.06
NCOA1-201ENST00000288599 APOBP04114 4563 aaKnown RBP2.17□□□□□ -2.06
NCOA1-201ENST00000288599 KRTAP13-3Q3SY46 172 aa2.15□□□□□ -2.06
NCOA1-201ENST00000288599 KRTAP17-1Q9BYP8 105 aa2.14□□□□□ -2.07
NCOA1-201ENST00000288599 LRP1Q07954 4544 aaKnown RBP2.13□□□□□ -2.07
NCOA1-201ENST00000288599 ABCA13Q86UQ4 5058 aa2.13□□□□□ -2.07
NCOA1-201ENST00000288599 MYCBP2O75592 4640 aa2.13□□□□□ -2.07
NCOA1-201ENST00000288599 KRTAP8-1Q8IUC2 63 aa2.12□□□□□ -2.07
NCOA1-201ENST00000288599 PKHD1L1Q86WI1 4243 aa2.1□□□□□ -2.07
NCOA1-201ENST00000288599 KRTAP10-5P60370 271 aa2.1□□□□□ -2.07
NCOA1-201ENST00000288599 EPPK1P58107 5090 aaKnown RBP2.1□□□□□ -2.07
NCOA1-201ENST00000288599 HSPG2P98160 4391 aa2.1□□□□□ -2.07
NCOA1-201ENST00000288599 KRTAP13-4Q3LI77 160 aa2.1□□□□□ -2.07
NCOA1-201ENST00000288599 FAT3Q8TDW7 4589 aa2.08□□□□□ -2.08
NCOA1-201ENST00000288599 KRTAP10-12P60413 245 aa2.08□□□□□ -2.08
NCOA1-201ENST00000288599 INE1O15225 51 aa2.06□□□□□ -2.08
NCOA1-201ENST00000288599 SPRR5A0A1B0GTR4 108 aa2.05□□□□□ -2.08
NCOA1-201ENST00000288599 LRP2P98164 4655 aa2.04□□□□□ -2.08
NCOA1-201ENST00000288599 KRTAP10-4P60372 401 aaPredicted RBP2.03□□□□□ -2.08
NCOA1-201ENST00000288599 KRTAP1-4P0C5Y4 121 aa2.02□□□□□ -2.09
NCOA1-201ENST00000288599 KRTAP12-1P59990 96 aa2.02□□□□□ -2.09
NCOA1-201ENST00000288599 PCLOQ9Y6V0 5065 aa2.02□□□□□ -2.09
NCOA1-201ENST00000288599 TNXBP22105 4242 aa2.01□□□□□ -2.09
NCOA1-201ENST00000288599 LPAP08519 4548 aa2.01□□□□□ -2.09
NCOA1-201ENST00000288599 MUC2Q02817 5179 aa1.99□□□□□ -2.09
NCOA1-201ENST00000288599 SPRR2FQ96RM1 72 aa1.96□□□□□ -2.1
NCOA1-201ENST00000288599 KRTAP3-1Q9BYR8 98 aa1.95□□□□□ -2.1
NCOA1-201ENST00000288599 SPRR2EP22531 72 aa1.94□□□□□ -2.1
NCOA1-201ENST00000288599 SPRR2BP35325 72 aa1.94□□□□□ -2.1
NCOA1-201ENST00000288599 SPRR2AP35326 72 aa1.94□□□□□ -2.1
NCOA1-201ENST00000288599 RNF213Q63HN8 5207 aa1.94□□□□□ -2.1
NCOA1-201ENST00000288599 KRTAP12-3P60328 96 aa1.94□□□□□ -2.1
NCOA1-201ENST00000288599 HERC2O95714 4834 aa1.93□□□□□ -2.1
NCOA1-201ENST00000288599 FAT4Q6V0I7 4981 aa1.93□□□□□ -2.1
NCOA1-201ENST00000288599 UBR4Q5T4S7 5183 aa1.93□□□□□ -2.1
NCOA1-201ENST00000288599 HERC1Q15751 4861 aa1.92□□□□□ -2.1
NCOA1-201ENST00000288599 HMCN2Q8NDA2 5059 aa1.92□□□□□ -2.1
NCOA1-201ENST00000288599 SPRR2DP22532 72 aa1.91□□□□□ -2.1
NCOA1-201ENST00000288599 BIRC6Q9NR09 4857 aa1.89□□□□□ -2.11
NCOA1-201ENST00000288599 KRTAP12-4P60329 112 aa1.89□□□□□ -2.11
NCOA1-201ENST00000288599 KRTAP3-3Q9BYR6 98 aa1.88□□□□□ -2.11
NCOA1-201ENST00000288599 MUC17Q685J3 4493 aa1.87□□□□□ -2.11
NCOA1-201ENST00000288599 LCE3AQ5TA76 89 aa1.85□□□□□ -2.11
NCOA1-201ENST00000288599 KRTAP3-2Q9BYR7 98 aa1.85□□□□□ -2.11
NCOA1-201ENST00000288599 KRTAP19-2Q3LHN2 52 aa1.85□□□□□ -2.11
NCOA1-201ENST00000288599 LCE2BO14633 110 aa1.82□□□□□ -2.12
NCOA1-201ENST00000288599 LCE2CQ5TA81 110 aa1.81□□□□□ -2.12
NCOA1-201ENST00000288599 MT1HL1P0DM35 61 aa1.81□□□□□ -2.12
NCOA1-201ENST00000288599 SPRR2GQ9BYE4 73 aa1.79□□□□□ -2.12
NCOA1-201ENST00000288599 LCE2DQ5TA82 110 aaPredicted RBP1.78□□□□□ -2.12
NCOA1-201ENST00000288599 FLGP20930 4061 aaPredicted RBP1.77□□□□□ -2.13
NCOA1-201ENST00000288599 KRTAP23-1A1A580 65 aa1.74□□□□□ -2.13
NCOA1-201ENST00000288599 KRTAP4-1Q9BYQ7 146 aa1.72□□□□□ -2.13
NCOA1-201ENST00000288599 KRTAP4-5Q9BYR2 181 aa1.71□□□□□ -2.14
NCOA1-201ENST00000288599 USH2AO75445 5202 aa1.7□□□□□ -2.14
NCOA1-201ENST00000288599 LCE3CQ5T5A8 94 aa1.7□□□□□ -2.14
NCOA1-201ENST00000288599 KRTAP19-4Q3LI73 84 aa1.68□□□□□ -2.14
NCOA1-201ENST00000288599 LCE3EQ5T5B0 92 aa1.68□□□□□ -2.14
NCOA1-201ENST00000288599 LCE3BQ5TA77 95 aa1.67□□□□□ -2.14
NCOA1-201ENST00000288599 KRTAP20-1Q3LI63 56 aa1.66□□□□□ -2.14
NCOA1-201ENST00000288599 MT3P25713 68 aa1.66□□□□□ -2.14
NCOA1-201ENST00000288599 MT4P47944 62 aa1.65□□□□□ -2.14
NCOA1-201ENST00000288599 LCE1BQ5T7P3 118 aa1.64□□□□□ -2.15
NCOA1-201ENST00000288599 LCE3DQ9BYE3 92 aa1.64□□□□□ -2.15
NCOA1-201ENST00000288599 LCE1CQ5T751 118 aa1.63□□□□□ -2.15
NCOA1-201ENST00000288599 LCE1EQ5T753 118 aa1.63□□□□□ -2.15
NCOA1-201ENST00000288599 LCE1FQ5T754 118 aa1.63□□□□□ -2.15
NCOA1-201ENST00000288599 LCE1AQ5T7P2 110 aa1.63□□□□□ -2.15
NCOA1-201ENST00000288599 LCE5AQ5TCM9 118 aa1.63□□□□□ -2.15
NCOA1-201ENST00000288599 KRTAP19-5Q3LI72 72 aa1.61□□□□□ -2.15
NCOA1-201ENST00000288599 MT1HP80294 61 aa1.59□□□□□ -2.15
NCOA1-201ENST00000288599 LCE1DQ5T752 114 aa1.59□□□□□ -2.16
NCOA1-201ENST00000288599 KRTAP19-1Q8IUB9 90 aa1.58□□□□□ -2.16
NCOA1-201ENST00000288599 SSPOA2VEC9 5147 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms