RNA–Protein interactions for RNA: ENST00000282570.3

GMCL1-201, Transcript of germ cell-less, spermatogenesis associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GMCL1, Length 4,191 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMCL1-201ENST00000282570 KRTAP10-10P60014 251 aa6.97□□□□□ -1.29
GMCL1-201ENST00000282570 MT1HL1P0DM35 61 aa6.94□□□□□ -1.3
GMCL1-201ENST00000282570 DNAH8Q96JB1 4490 aa6.94□□□□□ -1.3
GMCL1-201ENST00000282570 FRAS1Q86XX4 4008 aa6.93□□□□□ -1.3
GMCL1-201ENST00000282570 TNP1P09430 55 aa6.93□□□□□ -1.3
GMCL1-201ENST00000282570 LRP1BQ9NZR2 4599 aa6.92□□□□□ -1.3
GMCL1-201ENST00000282570 DNAH17Q9UFH2 4485 aa6.91□□□□□ -1.3
GMCL1-201ENST00000282570 KRTAP10-4P60372 401 aaPredicted RBP6.91□□□□□ -1.3
GMCL1-201ENST00000282570 MYCBP2O75592 4640 aa6.9□□□□□ -1.31
GMCL1-201ENST00000282570 DNAH2Q9P225 4427 aa6.89□□□□□ -1.31
GMCL1-201ENST00000282570 DNAH6Q9C0G6 4158 aa6.87□□□□□ -1.31
GMCL1-201ENST00000282570 RYR1P21817 5038 aa6.85□□□□□ -1.31
GMCL1-201ENST00000282570 KRTAP12-2P59991 146 aa6.85□□□□□ -1.31
GMCL1-201ENST00000282570 KIAA1109Q2LD37 5005 aa6.83□□□□□ -1.32
GMCL1-201ENST00000282570 KRTAP13-4Q3LI77 160 aa6.81□□□□□ -1.32
GMCL1-201ENST00000282570 HECTD4Q9Y4D8 3996 aa6.81□□□□□ -1.32
GMCL1-201ENST00000282570 DYNC1H1Q14204 4646 aaKnown RBP6.79□□□□□ -1.32
GMCL1-201ENST00000282570 DYNC2H1Q8NCM8 4307 aaKnown RBP6.79□□□□□ -1.32
GMCL1-201ENST00000282570 KRTAP10-6P60371 365 aaPredicted RBP6.76□□□□□ -1.33
GMCL1-201ENST00000282570 FAT3Q8TDW7 4589 aa6.74□□□□□ -1.33
GMCL1-201ENST00000282570 HYDINQ4G0P3 5121 aa6.72□□□□□ -1.33
GMCL1-201ENST00000282570 VPS13BQ7Z7G8 4022 aa6.72□□□□□ -1.33
GMCL1-201ENST00000282570 KRTAP12-1P59990 96 aa6.72□□□□□ -1.33
GMCL1-201ENST00000282570 PKHD1P08F94 4074 aa6.65□□□□□ -1.35
GMCL1-201ENST00000282570 KRTAP3-3Q9BYR6 98 aa6.65□□□□□ -1.35
GMCL1-201ENST00000282570 RYR3Q15413 4870 aa6.62□□□□□ -1.35
GMCL1-201ENST00000282570 SACSQ9NZJ4 4579 aa6.61□□□□□ -1.35
GMCL1-201ENST00000282570 LRP1Q07954 4544 aaKnown RBP6.6□□□□□ -1.35
GMCL1-201ENST00000282570 ALMS1Q8TCU4 4167 aa6.59□□□□□ -1.35
GMCL1-201ENST00000282570 KRTAP3-2Q9BYR7 98 aa6.57□□□□□ -1.36
GMCL1-201ENST00000282570 PP632Q6XCG6 107 aa6.56□□□□□ -1.36
GMCL1-201ENST00000282570 APOBP04114 4563 aaKnown RBP6.5□□□□□ -1.37
GMCL1-201ENST00000282570 FAT2Q9NYQ8 4349 aa6.48□□□□□ -1.37
GMCL1-201ENST00000282570 KRTAP15-1Q3LI76 137 aa6.44□□□□□ -1.38
GMCL1-201ENST00000282570 KMT2CQ8NEZ4 4911 aaKnown RBP6.44□□□□□ -1.38
GMCL1-201ENST00000282570 PRO2289Q9P1D8 64 aa6.43□□□□□ -1.38
GMCL1-201ENST00000282570 LORP23490 312 aaPredicted RBP6.42□□□□□ -1.38
GMCL1-201ENST00000282570 PKD1P98161 4303 aa6.41□□□□□ -1.38
GMCL1-201ENST00000282570 KRTAP17-1Q9BYP8 105 aa6.36□□□□□ -1.39
GMCL1-201ENST00000282570 LRP2P98164 4655 aa6.36□□□□□ -1.39
GMCL1-201ENST00000282570 KRTAP4-1Q9BYQ7 146 aa6.35□□□□□ -1.39
GMCL1-201ENST00000282570 RYR2Q92736 4967 aa6.32□□□□□ -1.4
GMCL1-201ENST00000282570 HERC2O95714 4834 aa6.28□□□□□ -1.4
GMCL1-201ENST00000282570 PCLOQ9Y6V0 5065 aa6.15□□□□□ -1.42
GMCL1-201ENST00000282570 HSPG2P98160 4391 aa6.14□□□□□ -1.43
GMCL1-201ENST00000282570 PKHD1L1Q86WI1 4243 aa6.05□□□□□ -1.44
GMCL1-201ENST00000282570 EPPK1P58107 5090 aaKnown RBP6□□□□□ -1.45
GMCL1-201ENST00000282570 LPAP08519 4548 aa6□□□□□ -1.45
GMCL1-201ENST00000282570 KRTAP10-12P60413 245 aa5.98□□□□□ -1.45
GMCL1-201ENST00000282570 TNXBP22105 4242 aa5.94□□□□□ -1.46
GMCL1-201ENST00000282570 MT1HP80294 61 aa5.93□□□□□ -1.46
GMCL1-201ENST00000282570 LCE3AQ5TA76 89 aa5.93□□□□□ -1.46
GMCL1-201ENST00000282570 FSIP2Q5CZC0 6907 aa5.9□□□□□ -1.47
GMCL1-201ENST00000282570 CRCT1Q9UGL9 99 aa5.89□□□□□ -1.47
GMCL1-201ENST00000282570 MT2AP02795 61 aa5.86□□□□□ -1.47
GMCL1-201ENST00000282570 KRTAP12-3P60328 96 aa5.85□□□□□ -1.47
GMCL1-201ENST00000282570 ABCA13Q86UQ4 5058 aa5.83□□□□□ -1.48
GMCL1-201ENST00000282570 MT1FP04733 61 aa5.82□□□□□ -1.48
GMCL1-201ENST00000282570 BIRC6Q9NR09 4857 aa5.8□□□□□ -1.48
GMCL1-201ENST00000282570 RNF213Q63HN8 5207 aa5.79□□□□□ -1.48
GMCL1-201ENST00000282570 MUC2Q02817 5179 aa5.76□□□□□ -1.49
GMCL1-201ENST00000282570 HERC1Q15751 4861 aa5.73□□□□□ -1.49
GMCL1-201ENST00000282570 SPRR2GQ9BYE4 73 aa5.68□□□□□ -1.5
GMCL1-201ENST00000282570 UBR4Q5T4S7 5183 aa5.65□□□□□ -1.5
GMCL1-201ENST00000282570 FAT4Q6V0I7 4981 aa5.62□□□□□ -1.51
GMCL1-201ENST00000282570 KRTAP19-1Q8IUB9 90 aa5.6□□□□□ -1.51
GMCL1-201ENST00000282570 INE1O15225 51 aa5.59□□□□□ -1.51
GMCL1-201ENST00000282570 KRTAP8-1Q8IUC2 63 aa5.54□□□□□ -1.52
GMCL1-201ENST00000282570 KRTAP23-1A1A580 65 aa5.51□□□□□ -1.53
GMCL1-201ENST00000282570 OBSCNQ5VST9 7968 aa5.5□□□□□ -1.53
GMCL1-201ENST00000282570 LCE2CQ5TA81 110 aa5.5□□□□□ -1.53
GMCL1-201ENST00000282570 SYNE1Q8NF91 8797 aaKnown RBP5.48□□□□□ -1.53
GMCL1-201ENST00000282570 KRTAP9-8Q9BYQ0 159 aa5.44□□□□□ -1.54
GMCL1-201ENST00000282570 MUC17Q685J3 4493 aa5.43□□□□□ -1.54
GMCL1-201ENST00000282570 KRTAP10-7P60409 375 aaPredicted RBP5.42□□□□□ -1.54
GMCL1-201ENST00000282570 KRTAP19-5Q3LI72 72 aa5.4□□□□□ -1.54
GMCL1-201ENST00000282570 KRTAP19-2Q3LHN2 52 aa5.4□□□□□ -1.55
GMCL1-201ENST00000282570 MT1BP07438 61 aa5.34□□□□□ -1.55
GMCL1-201ENST00000282570 FLGP20930 4061 aaPredicted RBP5.34□□□□□ -1.55
GMCL1-201ENST00000282570 MT1XP80297 61 aa5.32□□□□□ -1.56
GMCL1-201ENST00000282570 KRTAP4-8A0A0G2JLE6 195 aa5.31□□□□□ -1.56
GMCL1-201ENST00000282570 KRTAP19-8Q3LI54 63 aa5.31□□□□□ -1.56
GMCL1-201ENST00000282570 KRTAP4-8Q9BYQ9 185 aa5.31□□□□□ -1.56
GMCL1-201ENST00000282570 SPRR2FQ96RM1 72 aa5.3□□□□□ -1.56
GMCL1-201ENST00000282570 KRTAP10-5P60370 271 aa5.29□□□□□ -1.56
GMCL1-201ENST00000282570 HMCN2Q8NDA2 5059 aa5.28□□□□□ -1.56
GMCL1-201ENST00000282570 KRTAP9-3Q9BYQ3 159 aa5.23□□□□□ -1.57
GMCL1-201ENST00000282570 LCE2BO14633 110 aa5.15□□□□□ -1.58
GMCL1-201ENST00000282570 LCE3CQ5T5A8 94 aa5.15□□□□□ -1.58
GMCL1-201ENST00000282570 DSTQ03001 7570 aaKnown RBP5.1□□□□□ -1.59
GMCL1-201ENST00000282570 SPRR5A0A1B0GTR4 108 aa5.09□□□□□ -1.59
GMCL1-201ENST00000282570 USH2AO75445 5202 aa5.09□□□□□ -1.59
GMCL1-201ENST00000282570 KRTAP4-7Q9BYR0 210 aa5.01□□□□□ -1.61
GMCL1-201ENST00000282570 FCGBPQ9Y6R7 5405 aaPredicted RBP5□□□□□ -1.61
GMCL1-201ENST00000282570 MT1GP13640 62 aa4.94□□□□□ -1.62
GMCL1-201ENST00000282570 KMT2DO14686 5537 aa4.88□□□□□ -1.63
GMCL1-201ENST00000282570 SPRR2EP22531 72 aa4.83□□□□□ -1.64
GMCL1-201ENST00000282570 SPRR2BP35325 72 aa4.83□□□□□ -1.64
GMCL1-201ENST00000282570 SPRR2AP35326 72 aa4.83□□□□□ -1.64
GMCL1-201ENST00000282570 LCE3BQ5TA77 95 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms