RNA–Protein interactions for RNA: ENST00000282541.9

GPD1L-201, Transcript of glycerol-3-phosphate dehydrogenase 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPD1L, Length 4,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPD1L-201ENST00000282541 FRAS1Q86XX4 4008 aa7.45□□□□□ -1.22
GPD1L-201ENST00000282541 DNAH5Q8TE73 4624 aa7.44□□□□□ -1.22
GPD1L-201ENST00000282541 DNAH3Q8TD57 4116 aa7.43□□□□□ -1.22
GPD1L-201ENST00000282541 VPS13DQ5THJ4 4388 aa7.43□□□□□ -1.22
GPD1L-201ENST00000282541 FAT1Q14517 4588 aa7.41□□□□□ -1.22
GPD1L-201ENST00000282541 KRTAP3-2Q9BYR7 98 aa7.4□□□□□ -1.23
GPD1L-201ENST00000282541 LRP1BQ9NZR2 4599 aa7.4□□□□□ -1.23
GPD1L-201ENST00000282541 KRTAP3-3Q9BYR6 98 aa7.39□□□□□ -1.23
GPD1L-201ENST00000282541 KRTAP15-1Q3LI76 137 aa7.39□□□□□ -1.23
GPD1L-201ENST00000282541 DNAH17Q9UFH2 4485 aa7.31□□□□□ -1.24
GPD1L-201ENST00000282541 TNP1P09430 55 aa7.3□□□□□ -1.24
GPD1L-201ENST00000282541 DNAH6Q9C0G6 4158 aa7.29□□□□□ -1.24
GPD1L-201ENST00000282541 MYCBP2O75592 4640 aa7.29□□□□□ -1.24
GPD1L-201ENST00000282541 DNAH2Q9P225 4427 aa7.28□□□□□ -1.24
GPD1L-201ENST00000282541 DYNC1H1Q14204 4646 aaKnown RBP7.21□□□□□ -1.26
GPD1L-201ENST00000282541 ALMS1Q8TCU4 4167 aa7.2□□□□□ -1.26
GPD1L-201ENST00000282541 HYDINQ4G0P3 5121 aa7.2□□□□□ -1.26
GPD1L-201ENST00000282541 PP632Q6XCG6 107 aa7.19□□□□□ -1.26
GPD1L-201ENST00000282541 KRTAP10-4P60372 401 aaPredicted RBP7.16□□□□□ -1.26
GPD1L-201ENST00000282541 HECTD4Q9Y4D8 3996 aa7.16□□□□□ -1.26
GPD1L-201ENST00000282541 DYNC2H1Q8NCM8 4307 aaKnown RBP7.15□□□□□ -1.26
GPD1L-201ENST00000282541 VPS13BQ7Z7G8 4022 aa7.15□□□□□ -1.26
GPD1L-201ENST00000282541 PKHD1P08F94 4074 aa7.1□□□□□ -1.27
GPD1L-201ENST00000282541 KIAA1109Q2LD37 5005 aa7.08□□□□□ -1.28
GPD1L-201ENST00000282541 KRTAP4-5Q9BYR2 181 aa7.05□□□□□ -1.28
GPD1L-201ENST00000282541 LRP1Q07954 4544 aaKnown RBP7.02□□□□□ -1.29
GPD1L-201ENST00000282541 FAT3Q8TDW7 4589 aa7.01□□□□□ -1.29
GPD1L-201ENST00000282541 MT1HL1P0DM35 61 aa7□□□□□ -1.29
GPD1L-201ENST00000282541 RYR1P21817 5038 aa7□□□□□ -1.29
GPD1L-201ENST00000282541 SACSQ9NZJ4 4579 aa6.99□□□□□ -1.29
GPD1L-201ENST00000282541 KMT2CQ8NEZ4 4911 aaKnown RBP6.99□□□□□ -1.29
GPD1L-201ENST00000282541 APOBP04114 4563 aaKnown RBP6.98□□□□□ -1.29
GPD1L-201ENST00000282541 LORP23490 312 aaPredicted RBP6.97□□□□□ -1.29
GPD1L-201ENST00000282541 RYR3Q15413 4870 aa6.95□□□□□ -1.3
GPD1L-201ENST00000282541 FAT2Q9NYQ8 4349 aa6.9□□□□□ -1.31
GPD1L-201ENST00000282541 RYR2Q92736 4967 aa6.8□□□□□ -1.32
GPD1L-201ENST00000282541 KRTAP17-1Q9BYP8 105 aa6.79□□□□□ -1.32
GPD1L-201ENST00000282541 KRTAP10-10P60014 251 aa6.76□□□□□ -1.33
GPD1L-201ENST00000282541 PKD1P98161 4303 aa6.76□□□□□ -1.33
GPD1L-201ENST00000282541 LRP2P98164 4655 aa6.68□□□□□ -1.34
GPD1L-201ENST00000282541 HSPG2P98160 4391 aa6.57□□□□□ -1.36
GPD1L-201ENST00000282541 EPPK1P58107 5090 aaKnown RBP6.54□□□□□ -1.36
GPD1L-201ENST00000282541 HERC2O95714 4834 aa6.53□□□□□ -1.36
GPD1L-201ENST00000282541 KRTAP4-1Q9BYQ7 146 aa6.48□□□□□ -1.37
GPD1L-201ENST00000282541 LPAP08519 4548 aa6.47□□□□□ -1.37
GPD1L-201ENST00000282541 LCE3AQ5TA76 89 aa6.43□□□□□ -1.38
GPD1L-201ENST00000282541 PRO2289Q9P1D8 64 aa6.37□□□□□ -1.39
GPD1L-201ENST00000282541 PKHD1L1Q86WI1 4243 aa6.34□□□□□ -1.39
GPD1L-201ENST00000282541 ABCA13Q86UQ4 5058 aa6.3□□□□□ -1.4
GPD1L-201ENST00000282541 TNXBP22105 4242 aa6.26□□□□□ -1.41
GPD1L-201ENST00000282541 INE1O15225 51 aa6.25□□□□□ -1.41
GPD1L-201ENST00000282541 MUC2Q02817 5179 aa6.23□□□□□ -1.41
GPD1L-201ENST00000282541 KRTAP12-3P60328 96 aa6.22□□□□□ -1.41
GPD1L-201ENST00000282541 KRTAP10-12P60413 245 aa6.2□□□□□ -1.42
GPD1L-201ENST00000282541 HERC1Q15751 4861 aa6.15□□□□□ -1.43
GPD1L-201ENST00000282541 KRTAP23-1A1A580 65 aa6.13□□□□□ -1.43
GPD1L-201ENST00000282541 BIRC6Q9NR09 4857 aa6.12□□□□□ -1.43
GPD1L-201ENST00000282541 RNF213Q63HN8 5207 aa6.07□□□□□ -1.44
GPD1L-201ENST00000282541 PCLOQ9Y6V0 5065 aa6.05□□□□□ -1.44
GPD1L-201ENST00000282541 FAT4Q6V0I7 4981 aa5.99□□□□□ -1.45
GPD1L-201ENST00000282541 CRCT1Q9UGL9 99 aa5.94□□□□□ -1.46
GPD1L-201ENST00000282541 MT1HP80294 61 aa5.94□□□□□ -1.46
GPD1L-201ENST00000282541 UBR4Q5T4S7 5183 aa5.91□□□□□ -1.46
GPD1L-201ENST00000282541 SPRR2GQ9BYE4 73 aa5.89□□□□□ -1.47
GPD1L-201ENST00000282541 SPRR5A0A1B0GTR4 108 aa5.85□□□□□ -1.47
GPD1L-201ENST00000282541 KRTAP19-1Q8IUB9 90 aa5.85□□□□□ -1.47
GPD1L-201ENST00000282541 MT1FP04733 61 aa5.85□□□□□ -1.47
GPD1L-201ENST00000282541 MT2AP02795 61 aa5.84□□□□□ -1.48
GPD1L-201ENST00000282541 KRTAP8-1Q8IUC2 63 aa5.81□□□□□ -1.48
GPD1L-201ENST00000282541 KRTAP19-2Q3LHN2 52 aa5.74□□□□□ -1.49
GPD1L-201ENST00000282541 LCE2CQ5TA81 110 aa5.74□□□□□ -1.49
GPD1L-201ENST00000282541 FSIP2Q5CZC0 6907 aa5.73□□□□□ -1.49
GPD1L-201ENST00000282541 MUC17Q685J3 4493 aa5.73□□□□□ -1.49
GPD1L-201ENST00000282541 KRTAP10-7P60409 375 aaPredicted RBP5.72□□□□□ -1.49
GPD1L-201ENST00000282541 HMCN2Q8NDA2 5059 aa5.7□□□□□ -1.5
GPD1L-201ENST00000282541 KRTAP19-5Q3LI72 72 aa5.69□□□□□ -1.5
GPD1L-201ENST00000282541 FLGP20930 4061 aaPredicted RBP5.67□□□□□ -1.5
GPD1L-201ENST00000282541 KRTAP10-5P60370 271 aa5.64□□□□□ -1.51
GPD1L-201ENST00000282541 LCE3CQ5T5A8 94 aa5.6□□□□□ -1.51
GPD1L-201ENST00000282541 OBSCNQ5VST9 7968 aa5.59□□□□□ -1.51
GPD1L-201ENST00000282541 MT1XP80297 61 aa5.58□□□□□ -1.52
GPD1L-201ENST00000282541 KRTAP9-8Q9BYQ0 159 aa5.58□□□□□ -1.52
GPD1L-201ENST00000282541 MT1BP07438 61 aa5.5□□□□□ -1.53
GPD1L-201ENST00000282541 SYNE1Q8NF91 8797 aaKnown RBP5.49□□□□□ -1.53
GPD1L-201ENST00000282541 KRTAP4-8A0A0G2JLE6 195 aa5.48□□□□□ -1.53
GPD1L-201ENST00000282541 KRTAP4-8Q9BYQ9 185 aa5.48□□□□□ -1.53
GPD1L-201ENST00000282541 KRTAP19-8Q3LI54 63 aa5.44□□□□□ -1.54
GPD1L-201ENST00000282541 KRTAP4-7Q9BYR0 210 aa5.42□□□□□ -1.54
GPD1L-201ENST00000282541 USH2AO75445 5202 aa5.36□□□□□ -1.55
GPD1L-201ENST00000282541 KRTAP9-3Q9BYQ3 159 aa5.35□□□□□ -1.55
GPD1L-201ENST00000282541 KMT2DO14686 5537 aa5.3□□□□□ -1.56
GPD1L-201ENST00000282541 LCE2BO14633 110 aa5.26□□□□□ -1.57
GPD1L-201ENST00000282541 KRTAP12-4P60329 112 aa5.22□□□□□ -1.57
GPD1L-201ENST00000282541 DSTQ03001 7570 aaKnown RBP5.22□□□□□ -1.57
GPD1L-201ENST00000282541 FCGBPQ9Y6R7 5405 aaPredicted RBP5.16□□□□□ -1.58
GPD1L-201ENST00000282541 MT1GP13640 62 aa5.15□□□□□ -1.58
GPD1L-201ENST00000282541 LCE3BQ5TA77 95 aa5.08□□□□□ -1.6
GPD1L-201ENST00000282541 KRTAP9-6A8MVA2 160 aa5.04□□□□□ -1.6
GPD1L-201ENST00000282541 LCE2AQ5TA79 106 aaPredicted RBP5.03□□□□□ -1.6
GPD1L-201ENST00000282541 LOC100996750A0A140TA64 210 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms