RNA–Protein interactions for RNA: ENST00000282541.9

GPD1L-201, Transcript of glycerol-3-phosphate dehydrogenase 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPD1L, Length 4,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPD1L-201ENST00000282541 NISCHQ9Y2I1 1504 aa26.6■■□□□ 1.85
GPD1L-201ENST00000282541 SUPT5HO00267 1087 aaKnown RBP25.5■■□□□ 1.67
GPD1L-201ENST00000282541 DCAF8L2P0C7V8 631 aa25.2■■□□□ 1.63
GPD1L-201ENST00000282541 SHROOM4Q9ULL8 1493 aa25.18■■□□□ 1.62
GPD1L-201ENST00000282541 PCGF6Q9BYE7 350 aa24.91■■□□□ 1.58
GPD1L-201ENST00000282541 EHMT2Q96KQ7 1210 aa24.55■■□□□ 1.52
GPD1L-201ENST00000282541 PPARGC1BQ86YN6 1023 aaKnown RBP24.39■■□□□ 1.49
GPD1L-201ENST00000282541 HRCP23327 699 aa24.32■■□□□ 1.48
GPD1L-201ENST00000282541 FAM9AQ8IZU1 332 aaPredicted RBP23.96■■□□□ 1.43
GPD1L-201ENST00000282541 PELP1Q8IZL8 1130 aaKnown RBP23.86■■□□□ 1.41
GPD1L-201ENST00000282541 TTBK1Q5TCY1 1321 aaPredicted RBP23.81■■□□□ 1.4
GPD1L-201ENST00000282541 LOC105371045A0A1W2PR82 267 aa23.76■■□□□ 1.39
GPD1L-201ENST00000282541 CHIC1Q5VXU3 224 aa23.63■■□□□ 1.37
GPD1L-201ENST00000282541 YTHDC1Q96MU7 727 aaKnown RBP23.47■■□□□ 1.35
GPD1L-201ENST00000282541 TRIM26Q12899 539 aaPredicted RBP23.46■■□□□ 1.35
GPD1L-201ENST00000282541 ZEB1P37275 1124 aaPredicted RBP23.45■■□□□ 1.34
GPD1L-201ENST00000282541 CCER1Q8TC90 406 aaPredicted RBP23.44■■□□□ 1.34
GPD1L-201ENST00000282541 CENPBP07199 599 aaPredicted RBP23.4■■□□□ 1.34
GPD1L-201ENST00000282541 TRIM41Q8WV44 630 aa23.23■■□□□ 1.31
GPD1L-201ENST00000282541 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.05■■□□□ 1.28
GPD1L-201ENST00000282541 MYT1Q01538 1121 aa23.01■■□□□ 1.27
GPD1L-201ENST00000282541 GTF3C3Q9Y5Q9 886 aa23.01■■□□□ 1.27
GPD1L-201ENST00000282541 SCAF1Q9H7N4 1312 aaKnown RBP22.97■■□□□ 1.27
GPD1L-201ENST00000282541 RANGAP1P46060 587 aaPredicted RBP22.88■■□□□ 1.25
GPD1L-201ENST00000282541 DIEXFQ68CQ4 756 aaKnown RBP22.84■■□□□ 1.25
GPD1L-201ENST00000282541 MYO15BQ96JP2 1530 aa22.75■■□□□ 1.23
GPD1L-201ENST00000282541 ACIN1Q9UKV3 1341 aaKnown RBP22.73■■□□□ 1.23
GPD1L-201ENST00000282541 NEUROD1Q13562 356 aa22.67■■□□□ 1.22
GPD1L-201ENST00000282541 APLP2Q06481 763 aa22.66■■□□□ 1.22
GPD1L-201ENST00000282541 UBTFP17480 764 aaKnown RBP22.58■■□□□ 1.21
GPD1L-201ENST00000282541 HNRNPUL2Q1KMD3 747 aaKnown RBP22.52■■□□□ 1.19
GPD1L-201ENST00000282541 ERICH6Q7L0X2 663 aa22.41■■□□□ 1.18
GPD1L-201ENST00000282541 ABCC9O60706 1549 aa22.35■■□□□ 1.17
GPD1L-201ENST00000282541 BCANQ96GW7 911 aa22.31■■□□□ 1.16
GPD1L-201ENST00000282541 DCAF1Q9Y4B6 1507 aa22.26■■□□□ 1.15
GPD1L-201ENST00000282541 NEFLP07196 543 aa22.21■■□□□ 1.15
GPD1L-201ENST00000282541 ZCCHC6Q5VYS8 1495 aaKnown RBP22.18■■□□□ 1.14
GPD1L-201ENST00000282541 ITGAEP38570 1179 aa22.17■■□□□ 1.14
GPD1L-201ENST00000282541 ZNF316A6NFI3 1004 aaPredicted RBP22.15■■□□□ 1.14
GPD1L-201ENST00000282541 ATP1B4Q9UN42 357 aaPredicted RBP21.99■■□□□ 1.11
GPD1L-201ENST00000282541 MIER1Q8N108 512 aa21.97■■□□□ 1.11
GPD1L-201ENST00000282541 PABPN1Q86U42 306 aaKnown RBP eCLIP21.95■■□□□ 1.1
GPD1L-201ENST00000282541 CCDC180Q9P1Z9 1646 aa21.91■■□□□ 1.1
GPD1L-201ENST00000282541 CNGB1Q14028 1251 aaPredicted RBP21.84■■□□□ 1.09
GPD1L-201ENST00000282541 SCRIBQ14160 1630 aa21.7■■□□□ 1.06
GPD1L-201ENST00000282541 FKBP8Q14318 412 aa21.66■■□□□ 1.06
GPD1L-201ENST00000282541 POLR3GLQ9BT43 218 aa21.5■■□□□ 1.03
GPD1L-201ENST00000282541 TRIM52Q96A61 297 aa21.46■■□□□ 1.03
GPD1L-201ENST00000282541 ANP32EQ9BTT0 268 aa21.46■■□□□ 1.03
GPD1L-201ENST00000282541 BCL11AQ9H165 835 aa21.43■■□□□ 1.02
GPD1L-201ENST00000282541 DDX10Q13206 875 aaKnown RBP21.41■■□□□ 1.02
GPD1L-201ENST00000282541 SUPT16HQ9Y5B9 1047 aaKnown RBP21.4■■□□□ 1.02
GPD1L-201ENST00000282541 CSRNP3Q8WYN3 585 aa21.39■■□□□ 1.01
GPD1L-201ENST00000282541 HIRIP3Q9BW71 556 aaPredicted RBP21.38■■□□□ 1.01
GPD1L-201ENST00000282541 CDK11AQ9UQ88 783 aaPredicted RBP21.38■■□□□ 1.01
GPD1L-201ENST00000282541 IRX6P78412 446 aaPredicted RBP21.37■■□□□ 1.01
GPD1L-201ENST00000282541 FAM50AQ14320 339 aaKnown RBP21.34■■□□□ 1.01
GPD1L-201ENST00000282541 RTL5Q5HYW3 569 aaPredicted RBP21.32■■□□□ 1
GPD1L-201ENST00000282541 ANP32CO43423 234 aa21.31■■□□□ 1
GPD1L-201ENST00000282541 RSF1Q96T23 1441 aaPredicted RBP21.26■□□□□ 0.99
GPD1L-201ENST00000282541 NBR1Q14596 966 aa21.25■□□□□ 0.99
GPD1L-201ENST00000282541 TSHZ2Q9NRE2 1034 aa21.17■□□□□ 0.98
GPD1L-201ENST00000282541 HNRNPUQ00839 825 aaKnown RBP eCLIP21.15■□□□□ 0.98
GPD1L-201ENST00000282541 CECR2Q9BXF3 1484 aa21.14■□□□□ 0.97
GPD1L-201ENST00000282541 CLSPNQ9HAW4 1339 aa21.14■□□□□ 0.97
GPD1L-201ENST00000282541 DAXXQ9UER7 740 aaPredicted RBP21.09■□□□□ 0.97
GPD1L-201ENST00000282541 NPM2Q86SE8 214 aaKnown RBP21.08■□□□□ 0.96
GPD1L-201ENST00000282541 SENP3-EIF4A1A0A087X0R7 540 aa21.05■□□□□ 0.96
GPD1L-201ENST00000282541 CEP162Q5TB80 1403 aa21.05■□□□□ 0.96
GPD1L-201ENST00000282541 RBM19Q9Y4C8 960 aaKnown RBP21.01■□□□□ 0.95
GPD1L-201ENST00000282541 P3H3Q8IVL6 736 aa21.01■□□□□ 0.95
GPD1L-201ENST00000282541 KCNH8Q96L42 1107 aa21.01■□□□□ 0.95
GPD1L-201ENST00000282541 EIF5BO60841 1220 aaKnown RBP21■□□□□ 0.95
GPD1L-201ENST00000282541 FAM9BQ8IZU0 186 aa20.98■□□□□ 0.95
GPD1L-201ENST00000282541 NACADO15069 1562 aa20.94■□□□□ 0.94
GPD1L-201ENST00000282541 RTN4Q9NQC3 1192 aaKnown RBP20.91■□□□□ 0.94
GPD1L-201ENST00000282541 RB1CC1Q8TDY2 1594 aa20.91■□□□□ 0.94
GPD1L-201ENST00000282541 ZNF326Q5BKZ1 582 aaKnown RBP20.89■□□□□ 0.94
GPD1L-201ENST00000282541 ANP32AP39687 249 aaKnown RBP20.88■□□□□ 0.93
GPD1L-201ENST00000282541 SIN3AQ96ST3 1273 aa20.83■□□□□ 0.92
GPD1L-201ENST00000282541 MROH2BQ7Z745 1585 aa20.82■□□□□ 0.92
GPD1L-201ENST00000282541 SALL2Q9Y467 1007 aaPredicted RBP20.81■□□□□ 0.92
GPD1L-201ENST00000282541 CLIP1P30622 1438 aa20.79■□□□□ 0.92
GPD1L-201ENST00000282541 B4GALNT3Q6L9W6 998 aa20.73■□□□□ 0.91
GPD1L-201ENST00000282541 SOGA1O94964 1423 aa20.73■□□□□ 0.91
GPD1L-201ENST00000282541 ZBTB47Q9UFB7 747 aaPredicted RBP20.73■□□□□ 0.91
GPD1L-201ENST00000282541 DEKP35659 375 aaKnown RBP20.72■□□□□ 0.91
GPD1L-201ENST00000282541 CCDC136Q96JN2 1154 aa20.72■□□□□ 0.91
GPD1L-201ENST00000282541 ARID3CA6NKF2 412 aa20.71■□□□□ 0.91
GPD1L-201ENST00000282541 TONSLQ96HA7 1378 aa20.69■□□□□ 0.9
GPD1L-201ENST00000282541 TNIKQ9UKE5 1360 aa20.69■□□□□ 0.9
GPD1L-201ENST00000282541 MRS2Q9HD23 443 aa20.67■□□□□ 0.9
GPD1L-201ENST00000282541 ARXQ96QS3 562 aa20.59■□□□□ 0.89
GPD1L-201ENST00000282541 LAS1LQ9Y4W2 734 aaKnown RBP20.58■□□□□ 0.88
GPD1L-201ENST00000282541 CHIC2Q9UKJ5 165 aa20.57■□□□□ 0.88
GPD1L-201ENST00000282541 WIZO95785 1651 aa20.56■□□□□ 0.88
GPD1L-201ENST00000282541 MYT1LQ9UL68 1186 aa20.56■□□□□ 0.88
GPD1L-201ENST00000282541 BAZ1AQ9NRL2 1556 aaPredicted RBP20.56■□□□□ 0.88
GPD1L-201ENST00000282541 KANK4Q5T7N3 995 aaPredicted RBP20.55■□□□□ 0.88
GPD1L-201ENST00000282541 GOLGA3Q08378 1498 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms