RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 AKAP9Q99996 3911 aa5.05□□□□□ -1.6
SHPRH-201ENST00000275233 INE1O15225 51 aa5.04□□□□□ -1.6
SHPRH-201ENST00000275233 KRTAP8-1Q8IUC2 63 aa5.01□□□□□ -1.61
SHPRH-201ENST00000275233 KRTAP10-5P60370 271 aa4.98□□□□□ -1.61
SHPRH-201ENST00000275233 DNAH9Q9NYC9 4486 aa4.95□□□□□ -1.62
SHPRH-201ENST00000275233 ZNF469Q96JG9 3925 aaPredicted RBP4.95□□□□□ -1.62
SHPRH-201ENST00000275233 DNAH1Q9P2D7 4330 aa4.89□□□□□ -1.63
SHPRH-201ENST00000275233 KRTAP4-1Q9BYQ7 146 aa4.86□□□□□ -1.63
SHPRH-201ENST00000275233 KRTAP23-1A1A580 65 aa4.82□□□□□ -1.64
SHPRH-201ENST00000275233 MT1HP80294 61 aa4.82□□□□□ -1.64
SHPRH-201ENST00000275233 DNAH5Q8TE73 4624 aa4.77□□□□□ -1.65
SHPRH-201ENST00000275233 DNAH2Q9P225 4427 aa4.76□□□□□ -1.65
SHPRH-201ENST00000275233 DNAH10Q8IVF4 4471 aa4.75□□□□□ -1.65
SHPRH-201ENST00000275233 PLECQ15149 4684 aaKnown RBP4.71□□□□□ -1.66
SHPRH-201ENST00000275233 MT2AP02795 61 aa4.7□□□□□ -1.66
SHPRH-201ENST00000275233 SPRR2FQ96RM1 72 aa4.69□□□□□ -1.66
SHPRH-201ENST00000275233 DNAH3Q8TD57 4116 aa4.68□□□□□ -1.66
SHPRH-201ENST00000275233 DNAH11Q96DT5 4516 aa4.66□□□□□ -1.66
SHPRH-201ENST00000275233 ANK2Q01484 3957 aa4.63□□□□□ -1.67
SHPRH-201ENST00000275233 FAT2Q9NYQ8 4349 aa4.63□□□□□ -1.67
SHPRH-201ENST00000275233 MT1FP04733 61 aa4.63□□□□□ -1.67
SHPRH-201ENST00000275233 KRTAP19-5Q3LI72 72 aa4.62□□□□□ -1.67
SHPRH-201ENST00000275233 KRTAP10-7P60409 375 aaPredicted RBP4.6□□□□□ -1.67
SHPRH-201ENST00000275233 VPS13DQ5THJ4 4388 aa4.6□□□□□ -1.67
SHPRH-201ENST00000275233 DNAH17Q9UFH2 4485 aa4.59□□□□□ -1.67
SHPRH-201ENST00000275233 KMT2AQ03164 3969 aa4.58□□□□□ -1.68
SHPRH-201ENST00000275233 SPRR2GQ9BYE4 73 aa4.57□□□□□ -1.68
SHPRH-201ENST00000275233 DNAH8Q96JB1 4490 aa4.57□□□□□ -1.68
SHPRH-201ENST00000275233 LRP1BQ9NZR2 4599 aa4.57□□□□□ -1.68
SHPRH-201ENST00000275233 VPS13BQ7Z7G8 4022 aa4.55□□□□□ -1.68
SHPRH-201ENST00000275233 STARD9Q9P2P6 4700 aa4.54□□□□□ -1.68
SHPRH-201ENST00000275233 FRAS1Q86XX4 4008 aa4.54□□□□□ -1.68
SHPRH-201ENST00000275233 DYNC2H1Q8NCM8 4307 aaKnown RBP4.52□□□□□ -1.69
SHPRH-201ENST00000275233 FAT1Q14517 4588 aa4.49□□□□□ -1.69
SHPRH-201ENST00000275233 LCE3CQ5T5A8 94 aa4.47□□□□□ -1.69
SHPRH-201ENST00000275233 DYNC1H1Q14204 4646 aaKnown RBP4.47□□□□□ -1.69
SHPRH-201ENST00000275233 PRKDCP78527 4128 aaKnown RBP4.45□□□□□ -1.7
SHPRH-201ENST00000275233 SACSQ9NZJ4 4579 aa4.44□□□□□ -1.7
SHPRH-201ENST00000275233 SPRR2EP22531 72 aa4.44□□□□□ -1.7
SHPRH-201ENST00000275233 SPRR2BP35325 72 aa4.44□□□□□ -1.7
SHPRH-201ENST00000275233 SPRR2AP35326 72 aa4.44□□□□□ -1.7
SHPRH-201ENST00000275233 DNAH7Q8WXX0 4024 aa4.43□□□□□ -1.7
SHPRH-201ENST00000275233 LYSTQ99698 3801 aa4.43□□□□□ -1.7
SHPRH-201ENST00000275233 DNHD1Q96M86 4753 aa4.39□□□□□ -1.71
SHPRH-201ENST00000275233 CMYA5Q8N3K9 4069 aa4.39□□□□□ -1.71
SHPRH-201ENST00000275233 LCE3BQ5TA77 95 aa4.34□□□□□ -1.71
SHPRH-201ENST00000275233 RYR1P21817 5038 aa4.33□□□□□ -1.72
SHPRH-201ENST00000275233 KRTAP17-1Q9BYP8 105 aa4.31□□□□□ -1.72
SHPRH-201ENST00000275233 APOBP04114 4563 aaKnown RBP4.31□□□□□ -1.72
SHPRH-201ENST00000275233 DNAH6Q9C0G6 4158 aa4.31□□□□□ -1.72
SHPRH-201ENST00000275233 SPRR2DP22532 72 aa4.28□□□□□ -1.72
SHPRH-201ENST00000275233 MT1GP13640 62 aa4.27□□□□□ -1.73
SHPRH-201ENST00000275233 KRTAP19-1Q8IUB9 90 aa4.23□□□□□ -1.73
SHPRH-201ENST00000275233 FAT3Q8TDW7 4589 aa4.21□□□□□ -1.73
SHPRH-201ENST00000275233 LCE2BO14633 110 aa4.21□□□□□ -1.74
SHPRH-201ENST00000275233 MT1XP80297 61 aa4.2□□□□□ -1.74
SHPRH-201ENST00000275233 HECTD4Q9Y4D8 3996 aa4.2□□□□□ -1.74
SHPRH-201ENST00000275233 KRTAP4-8A0A0G2JLE6 195 aa4.2□□□□□ -1.74
SHPRH-201ENST00000275233 KRTAP4-8Q9BYQ9 185 aa4.2□□□□□ -1.74
SHPRH-201ENST00000275233 KRTAP19-8Q3LI54 63 aa4.18□□□□□ -1.74
SHPRH-201ENST00000275233 MYCBP2O75592 4640 aa4.14□□□□□ -1.75
SHPRH-201ENST00000275233 MT1BP07438 61 aa4.12□□□□□ -1.75
SHPRH-201ENST00000275233 RYR3Q15413 4870 aa4.11□□□□□ -1.75
SHPRH-201ENST00000275233 KRTAP9-8Q9BYQ0 159 aa4.11□□□□□ -1.75
SHPRH-201ENST00000275233 LRP1Q07954 4544 aaKnown RBP4.1□□□□□ -1.75
SHPRH-201ENST00000275233 KRTAP12-4P60329 112 aa4.09□□□□□ -1.75
SHPRH-201ENST00000275233 LPAP08519 4548 aa4.08□□□□□ -1.76
SHPRH-201ENST00000275233 HSPG2P98160 4391 aa4.07□□□□□ -1.76
SHPRH-201ENST00000275233 KRTAP19-4Q3LI73 84 aa4.05□□□□□ -1.76
SHPRH-201ENST00000275233 KRTAP9-3Q9BYQ3 159 aa4.01□□□□□ -1.77
SHPRH-201ENST00000275233 PKHD1L1Q86WI1 4243 aa3.99□□□□□ -1.77
SHPRH-201ENST00000275233 PKD1P98161 4303 aa3.98□□□□□ -1.77
SHPRH-201ENST00000275233 LCE2CQ5TA81 110 aa3.97□□□□□ -1.77
SHPRH-201ENST00000275233 KRTAP4-7Q9BYR0 210 aa3.97□□□□□ -1.77
SHPRH-201ENST00000275233 LCE3DQ9BYE3 92 aa3.95□□□□□ -1.78
SHPRH-201ENST00000275233 PKHD1P08F94 4074 aa3.93□□□□□ -1.78
SHPRH-201ENST00000275233 LCE2DQ5TA82 110 aaPredicted RBP3.91□□□□□ -1.78
SHPRH-201ENST00000275233 MT4P47944 62 aa3.89□□□□□ -1.79
SHPRH-201ENST00000275233 KRTAP19-3Q7Z4W3 81 aa3.88□□□□□ -1.79
SHPRH-201ENST00000275233 LCE3EQ5T5B0 92 aa3.85□□□□□ -1.79
SHPRH-201ENST00000275233 TNXBP22105 4242 aa3.84□□□□□ -1.79
SHPRH-201ENST00000275233 HYDINQ4G0P3 5121 aa3.83□□□□□ -1.8
SHPRH-201ENST00000275233 LRP2P98164 4655 aa3.83□□□□□ -1.8
SHPRH-201ENST00000275233 MT1LQ93083 61 aa3.81□□□□□ -1.8
SHPRH-201ENST00000275233 RYR2Q92736 4967 aa3.8□□□□□ -1.8
SHPRH-201ENST00000275233 KIAA1109Q2LD37 5005 aa3.79□□□□□ -1.8
SHPRH-201ENST00000275233 LOC100996750A0A140TA64 210 aa3.78□□□□□ -1.8
SHPRH-201ENST00000275233 MT1EP04732 61 aa3.78□□□□□ -1.8
SHPRH-201ENST00000275233 KRTAP9-2Q9BYQ4 174 aa3.75□□□□□ -1.81
SHPRH-201ENST00000275233 SPRR5A0A1B0GTR4 108 aa3.74□□□□□ -1.81
SHPRH-201ENST00000275233 KRTAP4-3Q9BYR4 195 aa3.74□□□□□ -1.81
SHPRH-201ENST00000275233 HERC1Q15751 4861 aa3.71□□□□□ -1.81
SHPRH-201ENST00000275233 HERC2O95714 4834 aa3.71□□□□□ -1.82
SHPRH-201ENST00000275233 LCE1BQ5T7P3 118 aa3.7□□□□□ -1.82
SHPRH-201ENST00000275233 MT1MQ8N339 61 aa3.69□□□□□ -1.82
SHPRH-201ENST00000275233 KRTAP19-2Q3LHN2 52 aa3.69□□□□□ -1.82
SHPRH-201ENST00000275233 FLGP20930 4061 aaPredicted RBP3.67□□□□□ -1.82
SHPRH-201ENST00000275233 LCE1DQ5T752 114 aa3.66□□□□□ -1.82
SHPRH-201ENST00000275233 PRM1P04553 51 aa3.65□□□□□ -1.83
SHPRH-201ENST00000275233 MT3P25713 68 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 130.2 ms