RNA–Protein interactions for RNA: ENST00000271640.9

SETDB1-201, Transcript of SET domain bifurcated 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SETDB1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETDB1-201ENST00000271640 VPS13DQ5THJ4 4388 aa3.7□□□□□ -1.82
SETDB1-201ENST00000271640 XP32Q5T750 250 aa3.7□□□□□ -1.82
SETDB1-201ENST00000271640 LUZP6Q538Z0 58 aa3.69□□□□□ -1.82
SETDB1-201ENST00000271640 RYR2Q92736 4967 aa3.69□□□□□ -1.82
SETDB1-201ENST00000271640 KRTAP13-4Q3LI77 160 aa3.64□□□□□ -1.83
SETDB1-201ENST00000271640 DNAH8Q96JB1 4490 aa3.64□□□□□ -1.83
SETDB1-201ENST00000271640 TPRXLQ17RH7 258 aa3.63□□□□□ -1.83
SETDB1-201ENST00000271640 DNAH11Q96DT5 4516 aa3.63□□□□□ -1.83
SETDB1-201ENST00000271640 EPPK1P58107 5090 aaKnown RBP3.63□□□□□ -1.83
SETDB1-201ENST00000271640 KRTAP10-6P60371 365 aaPredicted RBP3.62□□□□□ -1.83
SETDB1-201ENST00000271640 KRTAP12-2P59991 146 aa3.62□□□□□ -1.83
SETDB1-201ENST00000271640 PKHD1P08F94 4074 aa3.62□□□□□ -1.83
SETDB1-201ENST00000271640 KRTAP10-8P60410 259 aa3.61□□□□□ -1.83
SETDB1-201ENST00000271640 A0A1B0GVY2 172 aa3.61□□□□□ -1.83
SETDB1-201ENST00000271640 DNAH17Q9UFH2 4485 aa3.59□□□□□ -1.83
SETDB1-201ENST00000271640 ALMS1Q8TCU4 4167 aa3.58□□□□□ -1.84
SETDB1-201ENST00000271640 KRTAP12-1P59990 96 aa3.57□□□□□ -1.84
SETDB1-201ENST00000271640 KRTAP3-3Q9BYR6 98 aa3.56□□□□□ -1.84
SETDB1-201ENST00000271640 KRTAP3-2Q9BYR7 98 aa3.55□□□□□ -1.84
SETDB1-201ENST00000271640 PLAC4Q8WY50 150 aa3.53□□□□□ -1.84
SETDB1-201ENST00000271640 LRP1BQ9NZR2 4599 aa3.53□□□□□ -1.85
SETDB1-201ENST00000271640 KRTAP10-4P60372 401 aaPredicted RBP3.52□□□□□ -1.85
SETDB1-201ENST00000271640 DNAH5Q8TE73 4624 aa3.52□□□□□ -1.85
SETDB1-201ENST00000271640 VPS13BQ7Z7G8 4022 aa3.49□□□□□ -1.85
SETDB1-201ENST00000271640 FAT3Q8TDW7 4589 aa3.48□□□□□ -1.85
SETDB1-201ENST00000271640 PKHD1L1Q86WI1 4243 aa3.47□□□□□ -1.85
SETDB1-201ENST00000271640 PCLOQ9Y6V0 5065 aa3.45□□□□□ -1.86
SETDB1-201ENST00000271640 KRTAP15-1Q3LI76 137 aa3.45□□□□□ -1.86
SETDB1-201ENST00000271640 DYNC1H1Q14204 4646 aaKnown RBP3.44□□□□□ -1.86
SETDB1-201ENST00000271640 PP632Q6XCG6 107 aa3.44□□□□□ -1.86
SETDB1-201ENST00000271640 TNP1P09430 55 aa3.43□□□□□ -1.86
SETDB1-201ENST00000271640 FAT1Q14517 4588 aa3.42□□□□□ -1.86
SETDB1-201ENST00000271640 APOBP04114 4563 aaKnown RBP3.41□□□□□ -1.86
SETDB1-201ENST00000271640 HSPG2P98160 4391 aa3.41□□□□□ -1.86
SETDB1-201ENST00000271640 ABCA13Q86UQ4 5058 aa3.39□□□□□ -1.87
SETDB1-201ENST00000271640 MT1HL1P0DM35 61 aa3.39□□□□□ -1.87
SETDB1-201ENST00000271640 HERC2O95714 4834 aa3.38□□□□□ -1.87
SETDB1-201ENST00000271640 BIRC6Q9NR09 4857 aa3.35□□□□□ -1.87
SETDB1-201ENST00000271640 RYR1P21817 5038 aa3.31□□□□□ -1.88
SETDB1-201ENST00000271640 MYCBP2O75592 4640 aa3.29□□□□□ -1.88
SETDB1-201ENST00000271640 LORP23490 312 aaPredicted RBP3.29□□□□□ -1.88
SETDB1-201ENST00000271640 KIAA1109Q2LD37 5005 aa3.26□□□□□ -1.89
SETDB1-201ENST00000271640 TNXBP22105 4242 aa3.26□□□□□ -1.89
SETDB1-201ENST00000271640 LRP1Q07954 4544 aaKnown RBP3.25□□□□□ -1.89
SETDB1-201ENST00000271640 KRTAP17-1Q9BYP8 105 aa3.22□□□□□ -1.89
SETDB1-201ENST00000271640 KRTAP4-5Q9BYR2 181 aa3.22□□□□□ -1.89
SETDB1-201ENST00000271640 HERC1Q15751 4861 aa3.2□□□□□ -1.9
SETDB1-201ENST00000271640 KRTAP10-10P60014 251 aa3.2□□□□□ -1.9
SETDB1-201ENST00000271640 PRO2289Q9P1D8 64 aa3.17□□□□□ -1.9
SETDB1-201ENST00000271640 KRTAP4-1Q9BYQ7 146 aa3.15□□□□□ -1.91
SETDB1-201ENST00000271640 LRP2P98164 4655 aa3.12□□□□□ -1.91
SETDB1-201ENST00000271640 HMCN2Q8NDA2 5059 aa3.1□□□□□ -1.91
SETDB1-201ENST00000271640 KRTAP23-1A1A580 65 aa3.06□□□□□ -1.92
SETDB1-201ENST00000271640 LCE3AQ5TA76 89 aa3.03□□□□□ -1.92
SETDB1-201ENST00000271640 LPAP08519 4548 aa3□□□□□ -1.93
SETDB1-201ENST00000271640 UBR4Q5T4S7 5183 aa2.99□□□□□ -1.93
SETDB1-201ENST00000271640 KRTAP10-12P60413 245 aa2.96□□□□□ -1.94
SETDB1-201ENST00000271640 MUC2Q02817 5179 aa2.96□□□□□ -1.94
SETDB1-201ENST00000271640 KRTAP12-3P60328 96 aa2.94□□□□□ -1.94
SETDB1-201ENST00000271640 INE1O15225 51 aa2.94□□□□□ -1.94
SETDB1-201ENST00000271640 SPRR2GQ9BYE4 73 aa2.92□□□□□ -1.94
SETDB1-201ENST00000271640 RNF213Q63HN8 5207 aa2.92□□□□□ -1.94
SETDB1-201ENST00000271640 MUC17Q685J3 4493 aa2.91□□□□□ -1.94
SETDB1-201ENST00000271640 MT1HP80294 61 aa2.86□□□□□ -1.95
SETDB1-201ENST00000271640 KRTAP19-1Q8IUB9 90 aa2.86□□□□□ -1.95
SETDB1-201ENST00000271640 MT2AP02795 61 aa2.86□□□□□ -1.95
SETDB1-201ENST00000271640 KRTAP19-2Q3LHN2 52 aa2.86□□□□□ -1.95
SETDB1-201ENST00000271640 SPRR5A0A1B0GTR4 108 aa2.85□□□□□ -1.95
SETDB1-201ENST00000271640 MT1FP04733 61 aa2.85□□□□□ -1.95
SETDB1-201ENST00000271640 FLGP20930 4061 aaPredicted RBP2.85□□□□□ -1.95
SETDB1-201ENST00000271640 KRTAP8-1Q8IUC2 63 aa2.82□□□□□ -1.96
SETDB1-201ENST00000271640 LCE2CQ5TA81 110 aa2.77□□□□□ -1.97
SETDB1-201ENST00000271640 FAT4Q6V0I7 4981 aa2.76□□□□□ -1.97
SETDB1-201ENST00000271640 KRTAP19-8Q3LI54 63 aa2.74□□□□□ -1.97
SETDB1-201ENST00000271640 KRTAP10-7P60409 375 aaPredicted RBP2.73□□□□□ -1.97
SETDB1-201ENST00000271640 MT1XP80297 61 aa2.73□□□□□ -1.97
SETDB1-201ENST00000271640 KRTAP10-5P60370 271 aa2.72□□□□□ -1.97
SETDB1-201ENST00000271640 KRTAP19-5Q3LI72 72 aa2.71□□□□□ -1.98
SETDB1-201ENST00000271640 MT1BP07438 61 aa2.71□□□□□ -1.98
SETDB1-201ENST00000271640 KRTAP9-8Q9BYQ0 159 aa2.71□□□□□ -1.98
SETDB1-201ENST00000271640 LCE3CQ5T5A8 94 aa2.68□□□□□ -1.98
SETDB1-201ENST00000271640 CRCT1Q9UGL9 99 aa2.65□□□□□ -1.99
SETDB1-201ENST00000271640 LCE2AQ5TA79 106 aaPredicted RBP2.61□□□□□ -1.99
SETDB1-201ENST00000271640 KRTAP9-3Q9BYQ3 159 aa2.6□□□□□ -1.99
SETDB1-201ENST00000271640 KRTAP4-8A0A0G2JLE6 195 aa2.57□□□□□ -2
SETDB1-201ENST00000271640 KRTAP4-8Q9BYQ9 185 aa2.57□□□□□ -2
SETDB1-201ENST00000271640 LCE2DQ5TA82 110 aaPredicted RBP2.57□□□□□ -2
SETDB1-201ENST00000271640 KRTAP9-6A0A140TA67 174 aa2.54□□□□□ -2
SETDB1-201ENST00000271640 KRTAP4-7Q9BYR0 210 aa2.5□□□□□ -2.01
SETDB1-201ENST00000271640 LCE2BO14633 110 aa2.5□□□□□ -2.01
SETDB1-201ENST00000271640 KRTAP9-2Q9BYQ4 174 aa2.48□□□□□ -2.01
SETDB1-201ENST00000271640 SPRR2FQ96RM1 72 aa2.47□□□□□ -2.01
SETDB1-201ENST00000271640 KRTAP19-4Q3LI73 84 aa2.45□□□□□ -2.02
SETDB1-201ENST00000271640 USH2AO75445 5202 aa2.43□□□□□ -2.02
SETDB1-201ENST00000271640 SSPOA2VEC9 5147 aa2.41□□□□□ -2.02
SETDB1-201ENST00000271640 SPRR2EP22531 72 aa2.41□□□□□ -2.02
SETDB1-201ENST00000271640 SPRR2BP35325 72 aa2.41□□□□□ -2.02
SETDB1-201ENST00000271640 SPRR2AP35326 72 aa2.41□□□□□ -2.02
SETDB1-201ENST00000271640 MT1LQ93083 61 aa2.41□□□□□ -2.02
SETDB1-201ENST00000271640 MT1GP13640 62 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms