RNA–Protein interactions for RNA: ENST00000269571.9

ERBB2-201, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERBB2, Length 4,545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-201ENST00000269571 DNAH5Q8TE73 4624 aa5.7□□□□□ -1.5
ERBB2-201ENST00000269571 DNAH10Q8IVF4 4471 aa5.68□□□□□ -1.5
ERBB2-201ENST00000269571 DNAH1Q9P2D7 4330 aa5.65□□□□□ -1.51
ERBB2-201ENST00000269571 INE1O15225 51 aa5.64□□□□□ -1.51
ERBB2-201ENST00000269571 PRKDCP78527 4128 aaKnown RBP5.64□□□□□ -1.51
ERBB2-201ENST00000269571 STARD9Q9P2P6 4700 aa5.62□□□□□ -1.51
ERBB2-201ENST00000269571 FAT1Q14517 4588 aa5.58□□□□□ -1.52
ERBB2-201ENST00000269571 VPS13DQ5THJ4 4388 aa5.54□□□□□ -1.52
ERBB2-201ENST00000269571 DYNC1H1Q14204 4646 aaKnown RBP5.49□□□□□ -1.53
ERBB2-201ENST00000269571 ALMS1Q8TCU4 4167 aa5.47□□□□□ -1.53
ERBB2-201ENST00000269571 ANK2Q01484 3957 aa5.47□□□□□ -1.53
ERBB2-201ENST00000269571 LRP1BQ9NZR2 4599 aa5.46□□□□□ -1.53
ERBB2-201ENST00000269571 KMT2AQ03164 3969 aa5.46□□□□□ -1.54
ERBB2-201ENST00000269571 DNAH8Q96JB1 4490 aa5.45□□□□□ -1.54
ERBB2-201ENST00000269571 RYR1P21817 5038 aa5.44□□□□□ -1.54
ERBB2-201ENST00000269571 DNAH17Q9UFH2 4485 aa5.44□□□□□ -1.54
ERBB2-201ENST00000269571 LORP23490 312 aaPredicted RBP5.44□□□□□ -1.54
ERBB2-201ENST00000269571 LYSTQ99698 3801 aa5.43□□□□□ -1.54
ERBB2-201ENST00000269571 KIAA1109Q2LD37 5005 aa5.41□□□□□ -1.54
ERBB2-201ENST00000269571 DNAH2Q9P225 4427 aa5.39□□□□□ -1.55
ERBB2-201ENST00000269571 MYCBP2O75592 4640 aa5.34□□□□□ -1.55
ERBB2-201ENST00000269571 SACSQ9NZJ4 4579 aa5.29□□□□□ -1.56
ERBB2-201ENST00000269571 RYR3Q15413 4870 aa5.28□□□□□ -1.56
ERBB2-201ENST00000269571 VPS13BQ7Z7G8 4022 aa5.26□□□□□ -1.57
ERBB2-201ENST00000269571 DNAH3Q8TD57 4116 aa5.26□□□□□ -1.57
ERBB2-201ENST00000269571 DYNC2H1Q8NCM8 4307 aaKnown RBP5.24□□□□□ -1.57
ERBB2-201ENST00000269571 CMYA5Q8N3K9 4069 aa5.24□□□□□ -1.57
ERBB2-201ENST00000269571 FAT2Q9NYQ8 4349 aa5.23□□□□□ -1.57
ERBB2-201ENST00000269571 FAT3Q8TDW7 4589 aa5.2□□□□□ -1.58
ERBB2-201ENST00000269571 KRTAP23-1A1A580 65 aa5.19□□□□□ -1.58
ERBB2-201ENST00000269571 FRAS1Q86XX4 4008 aa5.19□□□□□ -1.58
ERBB2-201ENST00000269571 LRP1Q07954 4544 aaKnown RBP5.19□□□□□ -1.58
ERBB2-201ENST00000269571 DNAH6Q9C0G6 4158 aa5.18□□□□□ -1.58
ERBB2-201ENST00000269571 APOBP04114 4563 aaKnown RBP5.18□□□□□ -1.58
ERBB2-201ENST00000269571 DNAH7Q8WXX0 4024 aa5.17□□□□□ -1.58
ERBB2-201ENST00000269571 KRTAP4-1Q9BYQ7 146 aa5.15□□□□□ -1.58
ERBB2-201ENST00000269571 KRTAP17-1Q9BYP8 105 aa5.15□□□□□ -1.59
ERBB2-201ENST00000269571 LCE3AQ5TA76 89 aa5.14□□□□□ -1.59
ERBB2-201ENST00000269571 HYDINQ4G0P3 5121 aa5.14□□□□□ -1.59
ERBB2-201ENST00000269571 KRTAP10-12P60413 245 aa5.13□□□□□ -1.59
ERBB2-201ENST00000269571 PKHD1P08F94 4074 aa5.07□□□□□ -1.6
ERBB2-201ENST00000269571 RYR2Q92736 4967 aa5.06□□□□□ -1.6
ERBB2-201ENST00000269571 KRTAP12-3P60328 96 aa5.06□□□□□ -1.6
ERBB2-201ENST00000269571 HECTD4Q9Y4D8 3996 aa5.05□□□□□ -1.6
ERBB2-201ENST00000269571 CRCT1Q9UGL9 99 aa5.03□□□□□ -1.6
ERBB2-201ENST00000269571 KMT2CQ8NEZ4 4911 aaKnown RBP5.02□□□□□ -1.61
ERBB2-201ENST00000269571 HERC2O95714 4834 aa5.02□□□□□ -1.61
ERBB2-201ENST00000269571 LRP2P98164 4655 aa4.97□□□□□ -1.61
ERBB2-201ENST00000269571 MT1HP80294 61 aa4.89□□□□□ -1.63
ERBB2-201ENST00000269571 HSPG2P98160 4391 aa4.86□□□□□ -1.63
ERBB2-201ENST00000269571 SPRR5A0A1B0GTR4 108 aa4.81□□□□□ -1.64
ERBB2-201ENST00000269571 MT2AP02795 61 aa4.81□□□□□ -1.64
ERBB2-201ENST00000269571 BIRC6Q9NR09 4857 aa4.8□□□□□ -1.64
ERBB2-201ENST00000269571 PKD1P98161 4303 aa4.78□□□□□ -1.64
ERBB2-201ENST00000269571 MT1FP04733 61 aa4.76□□□□□ -1.65
ERBB2-201ENST00000269571 EPPK1P58107 5090 aaKnown RBP4.75□□□□□ -1.65
ERBB2-201ENST00000269571 PCLOQ9Y6V0 5065 aa4.73□□□□□ -1.65
ERBB2-201ENST00000269571 LPAP08519 4548 aa4.72□□□□□ -1.65
ERBB2-201ENST00000269571 SPRR2GQ9BYE4 73 aa4.7□□□□□ -1.66
ERBB2-201ENST00000269571 ABCA13Q86UQ4 5058 aa4.66□□□□□ -1.66
ERBB2-201ENST00000269571 KRTAP8-1Q8IUC2 63 aa4.66□□□□□ -1.66
ERBB2-201ENST00000269571 KRTAP10-5P60370 271 aa4.65□□□□□ -1.67
ERBB2-201ENST00000269571 HERC1Q15751 4861 aa4.63□□□□□ -1.67
ERBB2-201ENST00000269571 KRTAP19-1Q8IUB9 90 aa4.58□□□□□ -1.68
ERBB2-201ENST00000269571 KRTAP19-5Q3LI72 72 aa4.56□□□□□ -1.68
ERBB2-201ENST00000269571 LCE2CQ5TA81 110 aa4.52□□□□□ -1.69
ERBB2-201ENST00000269571 TNXBP22105 4242 aa4.51□□□□□ -1.69
ERBB2-201ENST00000269571 KRTAP10-7P60409 375 aaPredicted RBP4.5□□□□□ -1.69
ERBB2-201ENST00000269571 PKHD1L1Q86WI1 4243 aa4.5□□□□□ -1.69
ERBB2-201ENST00000269571 LCE3CQ5T5A8 94 aa4.49□□□□□ -1.69
ERBB2-201ENST00000269571 KRTAP9-8Q9BYQ0 159 aa4.47□□□□□ -1.69
ERBB2-201ENST00000269571 SYNE1Q8NF91 8797 aaKnown RBP4.43□□□□□ -1.7
ERBB2-201ENST00000269571 RNF213Q63HN8 5207 aa4.42□□□□□ -1.7
ERBB2-201ENST00000269571 FSIP2Q5CZC0 6907 aa4.42□□□□□ -1.7
ERBB2-201ENST00000269571 KRTAP19-8Q3LI54 63 aa4.42□□□□□ -1.7
ERBB2-201ENST00000269571 KRTAP19-2Q3LHN2 52 aa4.41□□□□□ -1.7
ERBB2-201ENST00000269571 UBR4Q5T4S7 5183 aa4.41□□□□□ -1.7
ERBB2-201ENST00000269571 MT1XP80297 61 aa4.39□□□□□ -1.71
ERBB2-201ENST00000269571 MUC2Q02817 5179 aa4.38□□□□□ -1.71
ERBB2-201ENST00000269571 MT1BP07438 61 aa4.38□□□□□ -1.71
ERBB2-201ENST00000269571 SPRR2FQ96RM1 72 aa4.37□□□□□ -1.71
ERBB2-201ENST00000269571 MUC17Q685J3 4493 aa4.37□□□□□ -1.71
ERBB2-201ENST00000269571 KRTAP9-3Q9BYQ3 159 aa4.32□□□□□ -1.72
ERBB2-201ENST00000269571 FAT4Q6V0I7 4981 aa4.32□□□□□ -1.72
ERBB2-201ENST00000269571 KRTAP4-8A0A0G2JLE6 195 aa4.3□□□□□ -1.72
ERBB2-201ENST00000269571 KRTAP4-8Q9BYQ9 185 aa4.3□□□□□ -1.72
ERBB2-201ENST00000269571 FLGP20930 4061 aaPredicted RBP4.3□□□□□ -1.72
ERBB2-201ENST00000269571 KRTAP12-4P60329 112 aa4.26□□□□□ -1.73
ERBB2-201ENST00000269571 HMCN2Q8NDA2 5059 aa4.22□□□□□ -1.73
ERBB2-201ENST00000269571 KRTAP4-7Q9BYR0 210 aa4.21□□□□□ -1.74
ERBB2-201ENST00000269571 LCE2BO14633 110 aa4.21□□□□□ -1.74
ERBB2-201ENST00000269571 OBSCNQ5VST9 7968 aa4.17□□□□□ -1.74
ERBB2-201ENST00000269571 MT1GP13640 62 aa4.14□□□□□ -1.75
ERBB2-201ENST00000269571 LCE3BQ5TA77 95 aa4.12□□□□□ -1.75
ERBB2-201ENST00000269571 KRTAP19-4Q3LI73 84 aa4.08□□□□□ -1.76
ERBB2-201ENST00000269571 LCE2AQ5TA79 106 aaPredicted RBP4.02□□□□□ -1.77
ERBB2-201ENST00000269571 SPRR2EP22531 72 aa3.99□□□□□ -1.77
ERBB2-201ENST00000269571 SPRR2BP35325 72 aa3.99□□□□□ -1.77
ERBB2-201ENST00000269571 SPRR2AP35326 72 aa3.99□□□□□ -1.77
ERBB2-201ENST00000269571 MT1LQ93083 61 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms