RNA–Protein interactions for RNA: ENST00000268679.8

CBFA2T3-201, Transcript of CBFA2/RUNX1 translocation partner 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CBFA2T3, Length 4,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFA2T3-201ENST00000268679 KRTAP3-2Q9BYR7 98 aa6.68□□□□□ -1.34
CBFA2T3-201ENST00000268679 KRTAP3-3Q9BYR6 98 aa6.67□□□□□ -1.34
CBFA2T3-201ENST00000268679 STARD9Q9P2P6 4700 aa6.65□□□□□ -1.34
CBFA2T3-201ENST00000268679 VPS13DQ5THJ4 4388 aa6.61□□□□□ -1.35
CBFA2T3-201ENST00000268679 FAT1Q14517 4588 aa6.6□□□□□ -1.35
CBFA2T3-201ENST00000268679 PRKDCP78527 4128 aaKnown RBP6.59□□□□□ -1.36
CBFA2T3-201ENST00000268679 DNAH8Q96JB1 4490 aa6.58□□□□□ -1.36
CBFA2T3-201ENST00000268679 DNAH5Q8TE73 4624 aa6.58□□□□□ -1.36
CBFA2T3-201ENST00000268679 DYNC2H1Q8NCM8 4307 aaKnown RBP6.58□□□□□ -1.36
CBFA2T3-201ENST00000268679 KMT2AQ03164 3969 aa6.56□□□□□ -1.36
CBFA2T3-201ENST00000268679 PRO2289Q9P1D8 64 aa6.56□□□□□ -1.36
CBFA2T3-201ENST00000268679 MT1HL1P0DM35 61 aa6.54□□□□□ -1.36
CBFA2T3-201ENST00000268679 KRTAP15-1Q3LI76 137 aa6.54□□□□□ -1.36
CBFA2T3-201ENST00000268679 DNAH17Q9UFH2 4485 aa6.52□□□□□ -1.37
CBFA2T3-201ENST00000268679 FRAS1Q86XX4 4008 aa6.51□□□□□ -1.37
CBFA2T3-201ENST00000268679 HECTD4Q9Y4D8 3996 aa6.5□□□□□ -1.37
CBFA2T3-201ENST00000268679 LRP1BQ9NZR2 4599 aa6.5□□□□□ -1.37
CBFA2T3-201ENST00000268679 MYCBP2O75592 4640 aa6.49□□□□□ -1.37
CBFA2T3-201ENST00000268679 KRTAP10-4P60372 401 aaPredicted RBP6.48□□□□□ -1.37
CBFA2T3-201ENST00000268679 DNAH2Q9P225 4427 aa6.46□□□□□ -1.37
CBFA2T3-201ENST00000268679 DNAH6Q9C0G6 4158 aa6.38□□□□□ -1.39
CBFA2T3-201ENST00000268679 KRTAP4-5Q9BYR2 181 aa6.35□□□□□ -1.39
CBFA2T3-201ENST00000268679 LORP23490 312 aaPredicted RBP6.33□□□□□ -1.4
CBFA2T3-201ENST00000268679 FAT3Q8TDW7 4589 aa6.29□□□□□ -1.4
CBFA2T3-201ENST00000268679 DYNC1H1Q14204 4646 aaKnown RBP6.29□□□□□ -1.4
CBFA2T3-201ENST00000268679 ALMS1Q8TCU4 4167 aa6.29□□□□□ -1.4
CBFA2T3-201ENST00000268679 RYR1P21817 5038 aa6.25□□□□□ -1.41
CBFA2T3-201ENST00000268679 VPS13BQ7Z7G8 4022 aa6.24□□□□□ -1.41
CBFA2T3-201ENST00000268679 HYDINQ4G0P3 5121 aa6.23□□□□□ -1.41
CBFA2T3-201ENST00000268679 KIAA1109Q2LD37 5005 aa6.23□□□□□ -1.41
CBFA2T3-201ENST00000268679 LRP1Q07954 4544 aaKnown RBP6.2□□□□□ -1.42
CBFA2T3-201ENST00000268679 SACSQ9NZJ4 4579 aa6.16□□□□□ -1.42
CBFA2T3-201ENST00000268679 PKD1P98161 4303 aa6.13□□□□□ -1.43
CBFA2T3-201ENST00000268679 FAT2Q9NYQ8 4349 aa6.13□□□□□ -1.43
CBFA2T3-201ENST00000268679 KRTAP10-12P60413 245 aa6.09□□□□□ -1.43
CBFA2T3-201ENST00000268679 PKHD1P08F94 4074 aa6.09□□□□□ -1.43
CBFA2T3-201ENST00000268679 APOBP04114 4563 aaKnown RBP6.08□□□□□ -1.44
CBFA2T3-201ENST00000268679 LCE3AQ5TA76 89 aa6.05□□□□□ -1.44
CBFA2T3-201ENST00000268679 KRTAP12-3P60328 96 aa6.03□□□□□ -1.44
CBFA2T3-201ENST00000268679 RYR3Q15413 4870 aa6.01□□□□□ -1.45
CBFA2T3-201ENST00000268679 INE1O15225 51 aa5.97□□□□□ -1.45
CBFA2T3-201ENST00000268679 KRTAP4-1Q9BYQ7 146 aa5.96□□□□□ -1.45
CBFA2T3-201ENST00000268679 CRCT1Q9UGL9 99 aa5.95□□□□□ -1.46
CBFA2T3-201ENST00000268679 LRP2P98164 4655 aa5.94□□□□□ -1.46
CBFA2T3-201ENST00000268679 KRTAP17-1Q9BYP8 105 aa5.91□□□□□ -1.46
CBFA2T3-201ENST00000268679 KRTAP23-1A1A580 65 aa5.87□□□□□ -1.47
CBFA2T3-201ENST00000268679 RYR2Q92736 4967 aa5.83□□□□□ -1.48
CBFA2T3-201ENST00000268679 KMT2CQ8NEZ4 4911 aaKnown RBP5.81□□□□□ -1.48
CBFA2T3-201ENST00000268679 PKHD1L1Q86WI1 4243 aa5.78□□□□□ -1.48
CBFA2T3-201ENST00000268679 LPAP08519 4548 aa5.68□□□□□ -1.5
CBFA2T3-201ENST00000268679 HSPG2P98160 4391 aa5.68□□□□□ -1.5
CBFA2T3-201ENST00000268679 TNXBP22105 4242 aa5.65□□□□□ -1.5
CBFA2T3-201ENST00000268679 HERC2O95714 4834 aa5.64□□□□□ -1.51
CBFA2T3-201ENST00000268679 MT2AP02795 61 aa5.6□□□□□ -1.51
CBFA2T3-201ENST00000268679 EPPK1P58107 5090 aaKnown RBP5.59□□□□□ -1.51
CBFA2T3-201ENST00000268679 MT1HP80294 61 aa5.59□□□□□ -1.51
CBFA2T3-201ENST00000268679 SPRR2GQ9BYE4 73 aa5.58□□□□□ -1.52
CBFA2T3-201ENST00000268679 KRTAP10-5P60370 271 aa5.56□□□□□ -1.52
CBFA2T3-201ENST00000268679 MT1FP04733 61 aa5.54□□□□□ -1.52
CBFA2T3-201ENST00000268679 PCLOQ9Y6V0 5065 aa5.5□□□□□ -1.53
CBFA2T3-201ENST00000268679 MUC2Q02817 5179 aa5.46□□□□□ -1.54
CBFA2T3-201ENST00000268679 KRTAP8-1Q8IUC2 63 aa5.45□□□□□ -1.54
CBFA2T3-201ENST00000268679 KRTAP19-5Q3LI72 72 aa5.4□□□□□ -1.55
CBFA2T3-201ENST00000268679 KRTAP19-1Q8IUB9 90 aa5.4□□□□□ -1.55
CBFA2T3-201ENST00000268679 ABCA13Q86UQ4 5058 aa5.34□□□□□ -1.55
CBFA2T3-201ENST00000268679 RNF213Q63HN8 5207 aa5.34□□□□□ -1.56
CBFA2T3-201ENST00000268679 FSIP2Q5CZC0 6907 aa5.33□□□□□ -1.56
CBFA2T3-201ENST00000268679 KRTAP10-7P60409 375 aaPredicted RBP5.3□□□□□ -1.56
CBFA2T3-201ENST00000268679 LCE3CQ5T5A8 94 aa5.29□□□□□ -1.56
CBFA2T3-201ENST00000268679 FAT4Q6V0I7 4981 aa5.28□□□□□ -1.56
CBFA2T3-201ENST00000268679 SYNE1Q8NF91 8797 aaKnown RBP5.27□□□□□ -1.57
CBFA2T3-201ENST00000268679 HERC1Q15751 4861 aa5.22□□□□□ -1.57
CBFA2T3-201ENST00000268679 UBR4Q5T4S7 5183 aa5.22□□□□□ -1.57
CBFA2T3-201ENST00000268679 MT1XP80297 61 aa5.17□□□□□ -1.58
CBFA2T3-201ENST00000268679 KRTAP19-8Q3LI54 63 aa5.17□□□□□ -1.58
CBFA2T3-201ENST00000268679 OBSCNQ5VST9 7968 aa5.15□□□□□ -1.58
CBFA2T3-201ENST00000268679 MT1BP07438 61 aa5.13□□□□□ -1.59
CBFA2T3-201ENST00000268679 SPRR5A0A1B0GTR4 108 aa5.12□□□□□ -1.59
CBFA2T3-201ENST00000268679 MUC17Q685J3 4493 aa5.11□□□□□ -1.59
CBFA2T3-201ENST00000268679 SPRR2FQ96RM1 72 aa5.1□□□□□ -1.59
CBFA2T3-201ENST00000268679 KRTAP4-8A0A0G2JLE6 195 aa5.08□□□□□ -1.6
CBFA2T3-201ENST00000268679 KRTAP4-8Q9BYQ9 185 aa5.08□□□□□ -1.6
CBFA2T3-201ENST00000268679 BIRC6Q9NR09 4857 aa5.08□□□□□ -1.6
CBFA2T3-201ENST00000268679 KRTAP19-2Q3LHN2 52 aa5.08□□□□□ -1.6
CBFA2T3-201ENST00000268679 LCE2CQ5TA81 110 aa5.08□□□□□ -1.6
CBFA2T3-201ENST00000268679 KRTAP9-8Q9BYQ0 159 aa5.07□□□□□ -1.6
CBFA2T3-201ENST00000268679 FLGP20930 4061 aaPredicted RBP4.97□□□□□ -1.61
CBFA2T3-201ENST00000268679 HMCN2Q8NDA2 5059 aa4.95□□□□□ -1.62
CBFA2T3-201ENST00000268679 MT1GP13640 62 aa4.92□□□□□ -1.62
CBFA2T3-201ENST00000268679 KRTAP12-4P60329 112 aa4.91□□□□□ -1.62
CBFA2T3-201ENST00000268679 LCE3BQ5TA77 95 aa4.91□□□□□ -1.62
CBFA2T3-201ENST00000268679 KRTAP9-3Q9BYQ3 159 aa4.9□□□□□ -1.63
CBFA2T3-201ENST00000268679 KRTAP4-7Q9BYR0 210 aa4.89□□□□□ -1.63
CBFA2T3-201ENST00000268679 KRTAP19-4Q3LI73 84 aa4.82□□□□□ -1.64
CBFA2T3-201ENST00000268679 USH2AO75445 5202 aa4.79□□□□□ -1.64
CBFA2T3-201ENST00000268679 DSTQ03001 7570 aaKnown RBP4.76□□□□□ -1.65
CBFA2T3-201ENST00000268679 LCE2BO14633 110 aa4.74□□□□□ -1.65
CBFA2T3-201ENST00000268679 FCGBPQ9Y6R7 5405 aaPredicted RBP4.7□□□□□ -1.66
CBFA2T3-201ENST00000268679 KMT2DO14686 5537 aa4.69□□□□□ -1.66
CBFA2T3-201ENST00000268679 MT1LQ93083 61 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms