RNA–Protein interactions for RNA: ENST00000265641.9

CPT1A-201, Transcript of carnitine palmitoyltransferase 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPT1A, Length 5,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-201ENST00000265641 DNAH9Q9NYC9 4486 aa4.88□□□□□ -1.63
CPT1A-201ENST00000265641 KRTAP19-4Q3LI73 84 aa4.84□□□□□ -1.63
CPT1A-201ENST00000265641 DNAH3Q8TD57 4116 aa4.81□□□□□ -1.64
CPT1A-201ENST00000265641 KRTAP10-4P60372 401 aaPredicted RBP4.79□□□□□ -1.64
CPT1A-201ENST00000265641 VPS13DQ5THJ4 4388 aa4.77□□□□□ -1.65
CPT1A-201ENST00000265641 DNAH17Q9UFH2 4485 aa4.74□□□□□ -1.65
CPT1A-201ENST00000265641 DYNC2H1Q8NCM8 4307 aaKnown RBP4.74□□□□□ -1.65
CPT1A-201ENST00000265641 DNAH10Q8IVF4 4471 aa4.71□□□□□ -1.65
CPT1A-201ENST00000265641 ANK2Q01484 3957 aa4.71□□□□□ -1.66
CPT1A-201ENST00000265641 DNAH1Q9P2D7 4330 aa4.7□□□□□ -1.66
CPT1A-201ENST00000265641 DNAH6Q9C0G6 4158 aa4.7□□□□□ -1.66
CPT1A-201ENST00000265641 PLECQ15149 4684 aaKnown RBP4.69□□□□□ -1.66
CPT1A-201ENST00000265641 CMYA5Q8N3K9 4069 aa4.67□□□□□ -1.66
CPT1A-201ENST00000265641 MT1HL1P0DM35 61 aa4.64□□□□□ -1.67
CPT1A-201ENST00000265641 KRTAP10-12P60413 245 aa4.6□□□□□ -1.67
CPT1A-201ENST00000265641 KRTAP12-3P60328 96 aa4.59□□□□□ -1.67
CPT1A-201ENST00000265641 DNAH8Q96JB1 4490 aa4.59□□□□□ -1.67
CPT1A-201ENST00000265641 CSMD3Q7Z407 3707 aa4.58□□□□□ -1.68
CPT1A-201ENST00000265641 DNAH2Q9P225 4427 aa4.58□□□□□ -1.68
CPT1A-201ENST00000265641 DNAH11Q96DT5 4516 aa4.54□□□□□ -1.68
CPT1A-201ENST00000265641 STARD9Q9P2P6 4700 aa4.54□□□□□ -1.68
CPT1A-201ENST00000265641 LCE3AQ5TA76 89 aa4.52□□□□□ -1.69
CPT1A-201ENST00000265641 DNAH5Q8TE73 4624 aa4.49□□□□□ -1.69
CPT1A-201ENST00000265641 PRKDCP78527 4128 aaKnown RBP4.48□□□□□ -1.69
CPT1A-201ENST00000265641 DYNC1H1Q14204 4646 aaKnown RBP4.47□□□□□ -1.69
CPT1A-201ENST00000265641 DNAH7Q8WXX0 4024 aa4.46□□□□□ -1.7
CPT1A-201ENST00000265641 SACSQ9NZJ4 4579 aa4.44□□□□□ -1.7
CPT1A-201ENST00000265641 FAT2Q9NYQ8 4349 aa4.4□□□□□ -1.71
CPT1A-201ENST00000265641 KMT2AQ03164 3969 aa4.39□□□□□ -1.71
CPT1A-201ENST00000265641 LRP1BQ9NZR2 4599 aa4.38□□□□□ -1.71
CPT1A-201ENST00000265641 DNHD1Q96M86 4753 aa4.37□□□□□ -1.71
CPT1A-201ENST00000265641 HECTD4Q9Y4D8 3996 aa4.37□□□□□ -1.71
CPT1A-201ENST00000265641 LYSTQ99698 3801 aa4.35□□□□□ -1.71
CPT1A-201ENST00000265641 SPRR5A0A1B0GTR4 108 aa4.34□□□□□ -1.71
CPT1A-201ENST00000265641 KRTAP4-5Q9BYR2 181 aa4.31□□□□□ -1.72
CPT1A-201ENST00000265641 FRAS1Q86XX4 4008 aa4.24□□□□□ -1.73
CPT1A-201ENST00000265641 VPS13BQ7Z7G8 4022 aa4.23□□□□□ -1.73
CPT1A-201ENST00000265641 KRTAP8-1Q8IUC2 63 aa4.23□□□□□ -1.73
CPT1A-201ENST00000265641 APOBP04114 4563 aaKnown RBP4.21□□□□□ -1.74
CPT1A-201ENST00000265641 FAT1Q14517 4588 aa4.2□□□□□ -1.74
CPT1A-201ENST00000265641 HYDINQ4G0P3 5121 aa4.16□□□□□ -1.74
CPT1A-201ENST00000265641 RYR2Q92736 4967 aa4.16□□□□□ -1.74
CPT1A-201ENST00000265641 KRTAP10-5P60370 271 aa4.16□□□□□ -1.74
CPT1A-201ENST00000265641 SPRR2GQ9BYE4 73 aa4.16□□□□□ -1.74
CPT1A-201ENST00000265641 PKHD1L1Q86WI1 4243 aa4.15□□□□□ -1.75
CPT1A-201ENST00000265641 PKD1P98161 4303 aa4.15□□□□□ -1.75
CPT1A-201ENST00000265641 CRCT1Q9UGL9 99 aa4.15□□□□□ -1.75
CPT1A-201ENST00000265641 KRTAP4-1Q9BYQ7 146 aa4.14□□□□□ -1.75
CPT1A-201ENST00000265641 FAT3Q8TDW7 4589 aa4.12□□□□□ -1.75
CPT1A-201ENST00000265641 RYR1P21817 5038 aa4.12□□□□□ -1.75
CPT1A-201ENST00000265641 LCE3CQ5T5A8 94 aa4.11□□□□□ -1.75
CPT1A-201ENST00000265641 LCE4AQ5TA78 99 aa4.09□□□□□ -1.76
CPT1A-201ENST00000265641 HSPG2P98160 4391 aa4.05□□□□□ -1.76
CPT1A-201ENST00000265641 KRTAP17-1Q9BYP8 105 aa4.04□□□□□ -1.76
CPT1A-201ENST00000265641 KRTAP9-6A0A140TA67 174 aa4.02□□□□□ -1.77
CPT1A-201ENST00000265641 KRTAP9-7A8MTY7 169 aa4.02□□□□□ -1.77
CPT1A-201ENST00000265641 PKHD1P08F94 4074 aa4.02□□□□□ -1.77
CPT1A-201ENST00000265641 MYCBP2O75592 4640 aa4.02□□□□□ -1.77
CPT1A-201ENST00000265641 KRTAP9-4Q9BYQ2 154 aa3.99□□□□□ -1.77
CPT1A-201ENST00000265641 RYR3Q15413 4870 aa3.99□□□□□ -1.77
CPT1A-201ENST00000265641 MT3P25713 68 aa3.98□□□□□ -1.77
CPT1A-201ENST00000265641 MT2AP02795 61 aa3.98□□□□□ -1.77
CPT1A-201ENST00000265641 MT1HP80294 61 aa3.96□□□□□ -1.78
CPT1A-201ENST00000265641 TNXBP22105 4242 aa3.95□□□□□ -1.78
CPT1A-201ENST00000265641 LRP1Q07954 4544 aaKnown RBP3.95□□□□□ -1.78
CPT1A-201ENST00000265641 KIAA1109Q2LD37 5005 aa3.94□□□□□ -1.78
CPT1A-201ENST00000265641 KRTAP19-5Q3LI72 72 aa3.93□□□□□ -1.78
CPT1A-201ENST00000265641 HERC1Q15751 4861 aa3.91□□□□□ -1.78
CPT1A-201ENST00000265641 MT1FP04733 61 aa3.9□□□□□ -1.78
CPT1A-201ENST00000265641 KRTAP19-1Q8IUB9 90 aa3.87□□□□□ -1.79
CPT1A-201ENST00000265641 KMT2CQ8NEZ4 4911 aaKnown RBP3.85□□□□□ -1.79
CPT1A-201ENST00000265641 MUC17Q685J3 4493 aa3.85□□□□□ -1.79
CPT1A-201ENST00000265641 KRTAP19-8Q3LI54 63 aa3.84□□□□□ -1.79
CPT1A-201ENST00000265641 LCE5AQ5TCM9 118 aa3.84□□□□□ -1.79
CPT1A-201ENST00000265641 LCE3BQ5TA77 95 aa3.82□□□□□ -1.8
CPT1A-201ENST00000265641 BIRC6Q9NR09 4857 aa3.82□□□□□ -1.8
CPT1A-201ENST00000265641 KRTAP12-4P60329 112 aa3.81□□□□□ -1.8
CPT1A-201ENST00000265641 KRTAP19-2Q3LHN2 52 aa3.78□□□□□ -1.8
CPT1A-201ENST00000265641 KRTAP10-7P60409 375 aaPredicted RBP3.78□□□□□ -1.8
CPT1A-201ENST00000265641 MT1XP80297 61 aa3.74□□□□□ -1.81
CPT1A-201ENST00000265641 HERC2O95714 4834 aa3.71□□□□□ -1.81
CPT1A-201ENST00000265641 LRP2P98164 4655 aa3.7□□□□□ -1.82
CPT1A-201ENST00000265641 LPAP08519 4548 aa3.69□□□□□ -1.82
CPT1A-201ENST00000265641 EPPK1P58107 5090 aaKnown RBP3.69□□□□□ -1.82
CPT1A-201ENST00000265641 MT1BP07438 61 aa3.67□□□□□ -1.82
CPT1A-201ENST00000265641 KRTAP9-8Q9BYQ0 159 aa3.67□□□□□ -1.82
CPT1A-201ENST00000265641 KRTAP9-3Q9BYQ3 159 aa3.66□□□□□ -1.82
CPT1A-201ENST00000265641 KRTAP9-9Q9BYP9 154 aa3.61□□□□□ -1.83
CPT1A-201ENST00000265641 FLGP20930 4061 aaPredicted RBP3.61□□□□□ -1.83
CPT1A-201ENST00000265641 LCE3EQ5T5B0 92 aa3.59□□□□□ -1.83
CPT1A-201ENST00000265641 ABCA13Q86UQ4 5058 aa3.59□□□□□ -1.84
CPT1A-201ENST00000265641 LCE3DQ9BYE3 92 aa3.57□□□□□ -1.84
CPT1A-201ENST00000265641 SPRR2FQ96RM1 72 aa3.53□□□□□ -1.84
CPT1A-201ENST00000265641 MT1GP13640 62 aa3.5□□□□□ -1.85
CPT1A-201ENST00000265641 KRTAP4-8A0A0G2JLE6 195 aa3.5□□□□□ -1.85
CPT1A-201ENST00000265641 KRTAP4-8Q9BYQ9 185 aa3.5□□□□□ -1.85
CPT1A-201ENST00000265641 MT1LQ93083 61 aa3.48□□□□□ -1.85
CPT1A-201ENST00000265641 KRTAP4-12Q9BQ66 201 aa3.47□□□□□ -1.85
CPT1A-201ENST00000265641 KRTAP2-3P0C7H8 128 aa3.46□□□□□ -1.86
CPT1A-201ENST00000265641 KRTAP2-4Q9BYR9 128 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms