RNA–Protein interactions for RNA: ENST00000264741.9

ITGA9-201, Transcript of integrin subunit alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA9, Length 7,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA9-201ENST00000264741 SPRR2FQ96RM1 72 aa6.81□□□□□ -1.32
ITGA9-201ENST00000264741 KRTAP3-3Q9BYR6 98 aa6.77□□□□□ -1.33
ITGA9-201ENST00000264741 KRTAP3-2Q9BYR7 98 aa6.72□□□□□ -1.33
ITGA9-201ENST00000264741 ZNF469Q96JG9 3925 aaPredicted RBP6.71□□□□□ -1.34
ITGA9-201ENST00000264741 ALMS1Q8TCU4 4167 aa6.65□□□□□ -1.35
ITGA9-201ENST00000264741 HUWE1Q7Z6Z7 4374 aaKnown RBP6.63□□□□□ -1.35
ITGA9-201ENST00000264741 KRTAP23-1A1A580 65 aa6.59□□□□□ -1.35
ITGA9-201ENST00000264741 SPRR2EP22531 72 aa6.52□□□□□ -1.37
ITGA9-201ENST00000264741 SPRR2BP35325 72 aa6.52□□□□□ -1.37
ITGA9-201ENST00000264741 SPRR2AP35326 72 aa6.52□□□□□ -1.37
ITGA9-201ENST00000264741 FRAS1Q86XX4 4008 aa6.49□□□□□ -1.37
ITGA9-201ENST00000264741 LYSTQ99698 3801 aa6.43□□□□□ -1.38
ITGA9-201ENST00000264741 KRTAP10-4P60372 401 aaPredicted RBP6.42□□□□□ -1.38
ITGA9-201ENST00000264741 LCE3BQ5TA77 95 aa6.38□□□□□ -1.39
ITGA9-201ENST00000264741 KRTAP19-5Q3LI72 72 aa6.38□□□□□ -1.39
ITGA9-201ENST00000264741 DNAH2Q9P225 4427 aa6.36□□□□□ -1.39
ITGA9-201ENST00000264741 MT1HP80294 61 aa6.35□□□□□ -1.39
ITGA9-201ENST00000264741 ANK2Q01484 3957 aa6.33□□□□□ -1.4
ITGA9-201ENST00000264741 DNAH1Q9P2D7 4330 aa6.32□□□□□ -1.4
ITGA9-201ENST00000264741 CMYA5Q8N3K9 4069 aa6.31□□□□□ -1.4
ITGA9-201ENST00000264741 SPRR2DP22532 72 aa6.29□□□□□ -1.4
ITGA9-201ENST00000264741 LCE3CQ5T5A8 94 aa6.23□□□□□ -1.41
ITGA9-201ENST00000264741 VPS13BQ7Z7G8 4022 aa6.22□□□□□ -1.41
ITGA9-201ENST00000264741 DNAH7Q8WXX0 4024 aa6.21□□□□□ -1.42
ITGA9-201ENST00000264741 KMT2AQ03164 3969 aa6.16□□□□□ -1.42
ITGA9-201ENST00000264741 LCE2BO14633 110 aa6.15□□□□□ -1.42
ITGA9-201ENST00000264741 MT2AP02795 61 aa6.12□□□□□ -1.43
ITGA9-201ENST00000264741 DNAH3Q8TD57 4116 aa6.11□□□□□ -1.43
ITGA9-201ENST00000264741 KRTAP4-1Q9BYQ7 146 aa6.11□□□□□ -1.43
ITGA9-201ENST00000264741 DNAH9Q9NYC9 4486 aa6.11□□□□□ -1.43
ITGA9-201ENST00000264741 KRTAP12-4P60329 112 aa6.1□□□□□ -1.43
ITGA9-201ENST00000264741 DNAH10Q8IVF4 4471 aa6.1□□□□□ -1.43
ITGA9-201ENST00000264741 MT1FP04733 61 aa6□□□□□ -1.45
ITGA9-201ENST00000264741 MT1GP13640 62 aa5.99□□□□□ -1.45
ITGA9-201ENST00000264741 SPRR2GQ9BYE4 73 aa5.97□□□□□ -1.45
ITGA9-201ENST00000264741 SPRR5A0A1B0GTR4 108 aa5.96□□□□□ -1.46
ITGA9-201ENST00000264741 DNAH11Q96DT5 4516 aa5.93□□□□□ -1.46
ITGA9-201ENST00000264741 DNAH6Q9C0G6 4158 aa5.92□□□□□ -1.46
ITGA9-201ENST00000264741 PLECQ15149 4684 aaKnown RBP5.91□□□□□ -1.46
ITGA9-201ENST00000264741 LCE2CQ5TA81 110 aa5.91□□□□□ -1.46
ITGA9-201ENST00000264741 DNAH5Q8TE73 4624 aa5.89□□□□□ -1.47
ITGA9-201ENST00000264741 FAT2Q9NYQ8 4349 aa5.86□□□□□ -1.47
ITGA9-201ENST00000264741 DNAH8Q96JB1 4490 aa5.84□□□□□ -1.48
ITGA9-201ENST00000264741 LCE2DQ5TA82 110 aaPredicted RBP5.82□□□□□ -1.48
ITGA9-201ENST00000264741 MT4P47944 62 aa5.77□□□□□ -1.49
ITGA9-201ENST00000264741 LCE3EQ5T5B0 92 aa5.77□□□□□ -1.49
ITGA9-201ENST00000264741 PRKDCP78527 4128 aaKnown RBP5.76□□□□□ -1.49
ITGA9-201ENST00000264741 HECTD4Q9Y4D8 3996 aa5.75□□□□□ -1.49
ITGA9-201ENST00000264741 LCE3DQ9BYE3 92 aa5.75□□□□□ -1.49
ITGA9-201ENST00000264741 STARD9Q9P2P6 4700 aa5.73□□□□□ -1.49
ITGA9-201ENST00000264741 VPS13DQ5THJ4 4388 aa5.73□□□□□ -1.49
ITGA9-201ENST00000264741 DNAH17Q9UFH2 4485 aa5.72□□□□□ -1.49
ITGA9-201ENST00000264741 FAT1Q14517 4588 aa5.69□□□□□ -1.5
ITGA9-201ENST00000264741 FLGP20930 4061 aaPredicted RBP5.69□□□□□ -1.5
ITGA9-201ENST00000264741 LRP1BQ9NZR2 4599 aa5.67□□□□□ -1.5
ITGA9-201ENST00000264741 LCE1BQ5T7P3 118 aa5.61□□□□□ -1.51
ITGA9-201ENST00000264741 DYNC2H1Q8NCM8 4307 aaKnown RBP5.61□□□□□ -1.51
ITGA9-201ENST00000264741 KRTAP19-1Q8IUB9 90 aa5.57□□□□□ -1.52
ITGA9-201ENST00000264741 KRTAP4-8A0A0G2JLE6 195 aa5.55□□□□□ -1.52
ITGA9-201ENST00000264741 KRTAP4-8Q9BYQ9 185 aa5.55□□□□□ -1.52
ITGA9-201ENST00000264741 MYCBP2O75592 4640 aa5.51□□□□□ -1.53
ITGA9-201ENST00000264741 KRTAP19-4Q3LI73 84 aa5.51□□□□□ -1.53
ITGA9-201ENST00000264741 LCE1DQ5T752 114 aa5.51□□□□□ -1.53
ITGA9-201ENST00000264741 APOBP04114 4563 aaKnown RBP5.5□□□□□ -1.53
ITGA9-201ENST00000264741 DNHD1Q96M86 4753 aa5.49□□□□□ -1.53
ITGA9-201ENST00000264741 SACSQ9NZJ4 4579 aa5.45□□□□□ -1.54
ITGA9-201ENST00000264741 FAT3Q8TDW7 4589 aa5.45□□□□□ -1.54
ITGA9-201ENST00000264741 DYNC1H1Q14204 4646 aaKnown RBP5.42□□□□□ -1.54
ITGA9-201ENST00000264741 MT1XP80297 61 aa5.39□□□□□ -1.55
ITGA9-201ENST00000264741 PRM1P04553 51 aa5.36□□□□□ -1.55
ITGA9-201ENST00000264741 RYR1P21817 5038 aa5.33□□□□□ -1.56
ITGA9-201ENST00000264741 LCE5AQ5TCM9 118 aa5.33□□□□□ -1.56
ITGA9-201ENST00000264741 PKD1P98161 4303 aa5.31□□□□□ -1.56
ITGA9-201ENST00000264741 LRP1Q07954 4544 aaKnown RBP5.29□□□□□ -1.56
ITGA9-201ENST00000264741 PKHD1P08F94 4074 aa5.27□□□□□ -1.57
ITGA9-201ENST00000264741 KRTAP19-8Q3LI54 63 aa5.27□□□□□ -1.57
ITGA9-201ENST00000264741 KRTAP19-3Q7Z4W3 81 aa5.23□□□□□ -1.57
ITGA9-201ENST00000264741 PKHD1L1Q86WI1 4243 aa5.22□□□□□ -1.57
ITGA9-201ENST00000264741 KRTAP4-7Q9BYR0 210 aa5.22□□□□□ -1.57
ITGA9-201ENST00000264741 MT3P25713 68 aa5.18□□□□□ -1.58
ITGA9-201ENST00000264741 KRTAP17-1Q9BYP8 105 aa5.16□□□□□ -1.58
ITGA9-201ENST00000264741 LCE1CQ5T751 118 aa5.15□□□□□ -1.58
ITGA9-201ENST00000264741 LCE1EQ5T753 118 aa5.15□□□□□ -1.58
ITGA9-201ENST00000264741 LCE1FQ5T754 118 aa5.15□□□□□ -1.58
ITGA9-201ENST00000264741 LCE1AQ5T7P2 110 aa5.15□□□□□ -1.58
ITGA9-201ENST00000264741 MT1BP07438 61 aa5.14□□□□□ -1.59
ITGA9-201ENST00000264741 KRTAP9-2Q9BYQ4 174 aa5.12□□□□□ -1.59
ITGA9-201ENST00000264741 KRTAP9-8Q9BYQ0 159 aa5.11□□□□□ -1.59
ITGA9-201ENST00000264741 LOC100996750A0A140TA64 210 aa5.09□□□□□ -1.59
ITGA9-201ENST00000264741 LPAP08519 4548 aa5.06□□□□□ -1.6
ITGA9-201ENST00000264741 LRP2P98164 4655 aa5.03□□□□□ -1.6
ITGA9-201ENST00000264741 KRTAP20-1Q3LI63 56 aa5.03□□□□□ -1.6
ITGA9-201ENST00000264741 MT1LQ93083 61 aa5.01□□□□□ -1.61
ITGA9-201ENST00000264741 TNXBP22105 4242 aa5.01□□□□□ -1.61
ITGA9-201ENST00000264741 HSPG2P98160 4391 aa5□□□□□ -1.61
ITGA9-201ENST00000264741 KRTAP9-3Q9BYQ3 159 aa5□□□□□ -1.61
ITGA9-201ENST00000264741 KRTAP19-6Q3LI70 58 aa4.99□□□□□ -1.61
ITGA9-201ENST00000264741 RYR3Q15413 4870 aa4.94□□□□□ -1.62
ITGA9-201ENST00000264741 KRTAP4-3Q9BYR4 195 aa4.94□□□□□ -1.62
ITGA9-201ENST00000264741 MT1EP04732 61 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms