RNA–Protein interactions for RNA: ENST00000264741.9

ITGA9-201, Transcript of integrin subunit alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA9, Length 7,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA9-201ENST00000264741 DCAF8L2P0C7V8 631 aa28.45■■■□□ 2.15
ITGA9-201ENST00000264741 EHMT2Q96KQ7 1210 aa26.71■■□□□ 1.87
ITGA9-201ENST00000264741 PELP1Q8IZL8 1130 aaKnown RBP26.7■■□□□ 1.86
ITGA9-201ENST00000264741 ERICH6Q7L0X2 663 aa26.15■■□□□ 1.78
ITGA9-201ENST00000264741 SUPT5HO00267 1087 aaKnown RBP26.08■■□□□ 1.76
ITGA9-201ENST00000264741 FAM9AQ8IZU1 332 aaPredicted RBP25.89■■□□□ 1.73
ITGA9-201ENST00000264741 APLP2Q06481 763 aa25.82■■□□□ 1.72
ITGA9-201ENST00000264741 TTBK1Q5TCY1 1321 aaPredicted RBP25.72■■□□□ 1.71
ITGA9-201ENST00000264741 MYT1Q01538 1121 aa25.64■■□□□ 1.69
ITGA9-201ENST00000264741 CCER1Q8TC90 406 aaPredicted RBP25.57■■□□□ 1.68
ITGA9-201ENST00000264741 ATP1B4Q9UN42 357 aaPredicted RBP25.45■■□□□ 1.67
ITGA9-201ENST00000264741 RANGAP1P46060 587 aaPredicted RBP25.44■■□□□ 1.66
ITGA9-201ENST00000264741 SHROOM4Q9ULL8 1493 aa25.36■■□□□ 1.65
ITGA9-201ENST00000264741 MYT1LQ9UL68 1186 aa24.99■■□□□ 1.59
ITGA9-201ENST00000264741 CHIC1Q5VXU3 224 aa24.93■■□□□ 1.58
ITGA9-201ENST00000264741 PCGF6Q9BYE7 350 aa24.91■■□□□ 1.58
ITGA9-201ENST00000264741 DAXXQ9UER7 740 aaPredicted RBP24.89■■□□□ 1.57
ITGA9-201ENST00000264741 NEFLP07196 543 aa24.83■■□□□ 1.57
ITGA9-201ENST00000264741 CENPBP07199 599 aaPredicted RBP24.71■■□□□ 1.55
ITGA9-201ENST00000264741 YTHDC1Q96MU7 727 aaKnown RBP24.68■■□□□ 1.54
ITGA9-201ENST00000264741 POLR3GLQ9BT43 218 aa24.65■■□□□ 1.54
ITGA9-201ENST00000264741 SLC4A1APQ9BWU0 796 aaKnown RBP24.6■■□□□ 1.53
ITGA9-201ENST00000264741 CNGB1Q14028 1251 aaPredicted RBP24.54■■□□□ 1.52
ITGA9-201ENST00000264741 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.31■■□□□ 1.48
ITGA9-201ENST00000264741 HNRNPUL2Q1KMD3 747 aaKnown RBP24.31■■□□□ 1.48
ITGA9-201ENST00000264741 UBTFP17480 764 aaKnown RBP24.24■■□□□ 1.47
ITGA9-201ENST00000264741 ZNF316A6NFI3 1004 aaPredicted RBP24.17■■□□□ 1.46
ITGA9-201ENST00000264741 CLSPNQ9HAW4 1339 aa24.16■■□□□ 1.46
ITGA9-201ENST00000264741 SLC24A1O60721 1099 aa24.1■■□□□ 1.45
ITGA9-201ENST00000264741 BCL11AQ9H165 835 aa24.06■■□□□ 1.44
ITGA9-201ENST00000264741 ITGAEP38570 1179 aa24.01■■□□□ 1.43
ITGA9-201ENST00000264741 PPARGC1BQ86YN6 1023 aaKnown RBP23.97■■□□□ 1.43
ITGA9-201ENST00000264741 TRIM41Q8WV44 630 aa23.86■■□□□ 1.41
ITGA9-201ENST00000264741 RTL5Q5HYW3 569 aaPredicted RBP23.79■■□□□ 1.4
ITGA9-201ENST00000264741 ZEB1P37275 1124 aaPredicted RBP23.77■■□□□ 1.4
ITGA9-201ENST00000264741 ZBTB47Q9UFB7 747 aaPredicted RBP23.68■■□□□ 1.38
ITGA9-201ENST00000264741 BCANQ96GW7 911 aa23.64■■□□□ 1.37
ITGA9-201ENST00000264741 PLPPR3Q6T4P5 718 aa23.44■■□□□ 1.34
ITGA9-201ENST00000264741 CANXP27824 592 aaKnown RBP23.24■■□□□ 1.31
ITGA9-201ENST00000264741 NISCHQ9Y2I1 1504 aa23.21■■□□□ 1.31
ITGA9-201ENST00000264741 ZNF326Q5BKZ1 582 aaKnown RBP23.15■■□□□ 1.3
ITGA9-201ENST00000264741 TRIM52Q96A61 297 aa23.14■■□□□ 1.3
ITGA9-201ENST00000264741 A0A0G2JS52 829 aa23.12■■□□□ 1.29
ITGA9-201ENST00000264741 NEFMP07197 916 aa23.1■■□□□ 1.29
ITGA9-201ENST00000264741 FAM50AQ14320 339 aaKnown RBP23.05■■□□□ 1.28
ITGA9-201ENST00000264741 CDK11BP21127 795 aaKnown RBP23.01■■□□□ 1.27
ITGA9-201ENST00000264741 CDK11AQ9UQ88 783 aaPredicted RBP23.01■■□□□ 1.27
ITGA9-201ENST00000264741 SCAF1Q9H7N4 1312 aaKnown RBP23■■□□□ 1.27
ITGA9-201ENST00000264741 TULP1O00294 542 aaPredicted RBP22.99■■□□□ 1.27
ITGA9-201ENST00000264741 EIF5BO60841 1220 aaKnown RBP22.96■■□□□ 1.27
ITGA9-201ENST00000264741 FBLN2P98095 1184 aa22.95■■□□□ 1.27
ITGA9-201ENST00000264741 NEUROD1Q13562 356 aa22.95■■□□□ 1.26
ITGA9-201ENST00000264741 ANP32BQ92688 251 aaKnown RBP22.9■■□□□ 1.26
ITGA9-201ENST00000264741 HSP90AA1P07900 732 aaKnown RBP22.89■■□□□ 1.25
ITGA9-201ENST00000264741 NCBP3Q53F19 620 aaKnown RBP22.88■■□□□ 1.25
ITGA9-201ENST00000264741 ESF1Q9H501 851 aaKnown RBP22.86■■□□□ 1.25
ITGA9-201ENST00000264741 NPM2Q86SE8 214 aaKnown RBP22.82■■□□□ 1.24
ITGA9-201ENST00000264741 PLEKHG5O94827 1062 aa22.81■■□□□ 1.24
ITGA9-201ENST00000264741 STAG3Q9UJ98 1225 aa22.74■■□□□ 1.23
ITGA9-201ENST00000264741 ARXQ96QS3 562 aa22.73■■□□□ 1.23
ITGA9-201ENST00000264741 TRIM26Q12899 539 aaPredicted RBP22.66■■□□□ 1.22
ITGA9-201ENST00000264741 ARID3CA6NKF2 412 aa22.61■■□□□ 1.21
ITGA9-201ENST00000264741 HRCP23327 699 aa22.61■■□□□ 1.21
ITGA9-201ENST00000264741 CHGAP10645 457 aaKnown RBP22.61■■□□□ 1.21
ITGA9-201ENST00000264741 ZBTB7CA1YPR0 619 aa22.6■■□□□ 1.21
ITGA9-201ENST00000264741 ANP32CO43423 234 aa22.54■■□□□ 1.2
ITGA9-201ENST00000264741 ANP32AP39687 249 aaKnown RBP22.54■■□□□ 1.2
ITGA9-201ENST00000264741 DIEXFQ68CQ4 756 aaKnown RBP22.49■■□□□ 1.19
ITGA9-201ENST00000264741 SENP3Q9H4L4 574 aaPredicted RBP22.44■■□□□ 1.18
ITGA9-201ENST00000264741 GLIPR1L2Q4G1C9 344 aa22.43■■□□□ 1.18
ITGA9-201ENST00000264741 ZNF777Q9ULD5 760 aaPredicted RBP22.41■■□□□ 1.18
ITGA9-201ENST00000264741 UPF2Q9HAU5 1272 aaKnown RBP22.38■■□□□ 1.17
ITGA9-201ENST00000264741 C14orf37Q86TY3 774 aa22.37■■□□□ 1.17
ITGA9-201ENST00000264741 LOC105371045A0A1W2PR82 267 aa22.36■■□□□ 1.17
ITGA9-201ENST00000264741 TAOK2Q9UL54 1235 aa22.33■■□□□ 1.17
ITGA9-201ENST00000264741 TPRNQ4KMQ1 711 aa22.33■■□□□ 1.16
ITGA9-201ENST00000264741 SALL2Q9Y467 1007 aaPredicted RBP22.32■■□□□ 1.16
ITGA9-201ENST00000264741 HAP1P54257 671 aaPredicted RBP22.3■■□□□ 1.16
ITGA9-201ENST00000264741 NPHP1O15259 732 aa22.27■■□□□ 1.15
ITGA9-201ENST00000264741 CLSTN1O94985 981 aa22.21■■□□□ 1.15
ITGA9-201ENST00000264741 NBR1Q14596 966 aa22.2■■□□□ 1.14
ITGA9-201ENST00000264741 P3H3Q8IVL6 736 aa22.18■■□□□ 1.14
ITGA9-201ENST00000264741 PRM3Q9NNZ6 103 aa22.16■■□□□ 1.14
ITGA9-201ENST00000264741 GTF3C3Q9Y5Q9 886 aa22.12■■□□□ 1.13
ITGA9-201ENST00000264741 NPM1P06748 294 aaKnown RBP eCLIP22.09■■□□□ 1.13
ITGA9-201ENST00000264741 ZRSR1Q15695 479 aaKnown RBP22.05■■□□□ 1.12
ITGA9-201ENST00000264741 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.05■■□□□ 1.12
ITGA9-201ENST00000264741 PABPN1Q86U42 306 aaKnown RBP eCLIP22.02■■□□□ 1.12
ITGA9-201ENST00000264741 MYH16Q9H6N6 1097 aa22.01■■□□□ 1.11
ITGA9-201ENST00000264741 AMER1Q5JTC6 1135 aaPredicted RBP22■■□□□ 1.11
ITGA9-201ENST00000264741 NCLP19338 710 aaKnown RBP21.98■■□□□ 1.11
ITGA9-201ENST00000264741 DNTTIP2Q5QJE6 756 aaKnown RBP21.95■■□□□ 1.1
ITGA9-201ENST00000264741 TRIM44Q96DX7 344 aaPredicted RBP21.95■■□□□ 1.1
ITGA9-201ENST00000264741 TNNT2P45379 298 aaPredicted RBP21.92■■□□□ 1.1
ITGA9-201ENST00000264741 FAM9BQ8IZU0 186 aa21.91■■□□□ 1.1
ITGA9-201ENST00000264741 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.9■■□□□ 1.1
ITGA9-201ENST00000264741 PTMAP06454 111 aaKnown RBP21.88■■□□□ 1.09
ITGA9-201ENST00000264741 LMOD2Q6P5Q4 547 aa21.87■■□□□ 1.09
ITGA9-201ENST00000264741 WDR43Q15061 677 aaKnown RBP eCLIP21.86■■□□□ 1.09
ITGA9-201ENST00000264741 ISY1Q9ULR0 285 aaKnown RBP21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms