RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 KRTAP10-4P60372 401 aaPredicted RBP5.28□□□□□ -1.56
DNMT3A-201ENST00000264709 DNAH3Q8TD57 4116 aa5.28□□□□□ -1.56
DNMT3A-201ENST00000264709 MT1HL1P0DM35 61 aa5.13□□□□□ -1.59
DNMT3A-201ENST00000264709 DNAH2Q9P225 4427 aa5.12□□□□□ -1.59
DNMT3A-201ENST00000264709 DNAH10Q8IVF4 4471 aa5.11□□□□□ -1.59
DNMT3A-201ENST00000264709 VPS13BQ7Z7G8 4022 aa5.1□□□□□ -1.59
DNMT3A-201ENST00000264709 KRTAP10-12P60413 245 aa5.09□□□□□ -1.6
DNMT3A-201ENST00000264709 HUWE1Q7Z6Z7 4374 aaKnown RBP5.06□□□□□ -1.6
DNMT3A-201ENST00000264709 KMT2AQ03164 3969 aa5.04□□□□□ -1.6
DNMT3A-201ENST00000264709 DNAH1Q9P2D7 4330 aa5□□□□□ -1.61
DNMT3A-201ENST00000264709 CRCT1Q9UGL9 99 aa5□□□□□ -1.61
DNMT3A-201ENST00000264709 KRTAP12-3P60328 96 aa4.99□□□□□ -1.61
DNMT3A-201ENST00000264709 PRKDCP78527 4128 aaKnown RBP4.92□□□□□ -1.62
DNMT3A-201ENST00000264709 DNAH6Q9C0G6 4158 aa4.9□□□□□ -1.63
DNMT3A-201ENST00000264709 KRTAP19-4Q3LI73 84 aa4.86□□□□□ -1.63
DNMT3A-201ENST00000264709 FRAS1Q86XX4 4008 aa4.85□□□□□ -1.63
DNMT3A-201ENST00000264709 LCE3AQ5TA76 89 aa4.81□□□□□ -1.64
DNMT3A-201ENST00000264709 STARD9Q9P2P6 4700 aa4.81□□□□□ -1.64
DNMT3A-201ENST00000264709 VPS13DQ5THJ4 4388 aa4.81□□□□□ -1.64
DNMT3A-201ENST00000264709 PLECQ15149 4684 aaKnown RBP4.8□□□□□ -1.64
DNMT3A-201ENST00000264709 SPRR5A0A1B0GTR4 108 aa4.79□□□□□ -1.64
DNMT3A-201ENST00000264709 DNAH9Q9NYC9 4486 aa4.79□□□□□ -1.64
DNMT3A-201ENST00000264709 SPRR2GQ9BYE4 73 aa4.78□□□□□ -1.64
DNMT3A-201ENST00000264709 LORP23490 312 aaPredicted RBP4.78□□□□□ -1.64
DNMT3A-201ENST00000264709 KRTAP10-5P60370 271 aa4.77□□□□□ -1.65
DNMT3A-201ENST00000264709 DNAH11Q96DT5 4516 aa4.77□□□□□ -1.65
DNMT3A-201ENST00000264709 DNAH5Q8TE73 4624 aa4.76□□□□□ -1.65
DNMT3A-201ENST00000264709 KRTAP8-1Q8IUC2 63 aa4.74□□□□□ -1.65
DNMT3A-201ENST00000264709 DYNC2H1Q8NCM8 4307 aaKnown RBP4.74□□□□□ -1.65
DNMT3A-201ENST00000264709 FLGP20930 4061 aaPredicted RBP4.74□□□□□ -1.65
DNMT3A-201ENST00000264709 DNAH8Q96JB1 4490 aa4.74□□□□□ -1.65
DNMT3A-201ENST00000264709 RYR1P21817 5038 aa4.72□□□□□ -1.65
DNMT3A-201ENST00000264709 DNAH17Q9UFH2 4485 aa4.69□□□□□ -1.66
DNMT3A-201ENST00000264709 FAT2Q9NYQ8 4349 aa4.59□□□□□ -1.68
DNMT3A-201ENST00000264709 PKHD1P08F94 4074 aa4.57□□□□□ -1.68
DNMT3A-201ENST00000264709 LCE3CQ5T5A8 94 aa4.48□□□□□ -1.69
DNMT3A-201ENST00000264709 KRTAP4-1Q9BYQ7 146 aa4.46□□□□□ -1.7
DNMT3A-201ENST00000264709 DYNC1H1Q14204 4646 aaKnown RBP4.46□□□□□ -1.7
DNMT3A-201ENST00000264709 MYCBP2O75592 4640 aa4.42□□□□□ -1.7
DNMT3A-201ENST00000264709 KRTAP4-5Q9BYR2 181 aa4.42□□□□□ -1.7
DNMT3A-201ENST00000264709 LRP1BQ9NZR2 4599 aa4.41□□□□□ -1.7
DNMT3A-201ENST00000264709 KRTAP19-8Q3LI54 63 aa4.4□□□□□ -1.71
DNMT3A-201ENST00000264709 KRTAP10-7P60409 375 aaPredicted RBP4.39□□□□□ -1.71
DNMT3A-201ENST00000264709 MT2AP02795 61 aa4.38□□□□□ -1.71
DNMT3A-201ENST00000264709 KRTAP19-1Q8IUB9 90 aa4.35□□□□□ -1.71
DNMT3A-201ENST00000264709 APOBP04114 4563 aaKnown RBP4.35□□□□□ -1.71
DNMT3A-201ENST00000264709 DNHD1Q96M86 4753 aa4.35□□□□□ -1.71
DNMT3A-201ENST00000264709 SACSQ9NZJ4 4579 aa4.34□□□□□ -1.71
DNMT3A-201ENST00000264709 MT1HP80294 61 aa4.33□□□□□ -1.72
DNMT3A-201ENST00000264709 PKD1P98161 4303 aa4.3□□□□□ -1.72
DNMT3A-201ENST00000264709 KRTAP19-5Q3LI72 72 aa4.28□□□□□ -1.72
DNMT3A-201ENST00000264709 PKHD1L1Q86WI1 4243 aa4.28□□□□□ -1.72
DNMT3A-201ENST00000264709 LRP1Q07954 4544 aaKnown RBP4.27□□□□□ -1.73
DNMT3A-201ENST00000264709 MT1FP04733 61 aa4.27□□□□□ -1.73
DNMT3A-201ENST00000264709 FAT1Q14517 4588 aa4.22□□□□□ -1.73
DNMT3A-201ENST00000264709 HSPG2P98160 4391 aa4.21□□□□□ -1.73
DNMT3A-201ENST00000264709 MT1XP80297 61 aa4.21□□□□□ -1.74
DNMT3A-201ENST00000264709 SPRR2FQ96RM1 72 aa4.16□□□□□ -1.74
DNMT3A-201ENST00000264709 RYR3Q15413 4870 aa4.15□□□□□ -1.75
DNMT3A-201ENST00000264709 LRP2P98164 4655 aa4.12□□□□□ -1.75
DNMT3A-201ENST00000264709 TNXBP22105 4242 aa4.11□□□□□ -1.75
DNMT3A-201ENST00000264709 FAT3Q8TDW7 4589 aa4.07□□□□□ -1.76
DNMT3A-201ENST00000264709 PCLOQ9Y6V0 5065 aa4.07□□□□□ -1.76
DNMT3A-201ENST00000264709 RYR2Q92736 4967 aa4.06□□□□□ -1.76
DNMT3A-201ENST00000264709 KIAA1109Q2LD37 5005 aa4.06□□□□□ -1.76
DNMT3A-201ENST00000264709 MT1BP07438 61 aa4.05□□□□□ -1.76
DNMT3A-201ENST00000264709 KRTAP12-4P60329 112 aa4.03□□□□□ -1.76
DNMT3A-201ENST00000264709 KRTAP19-2Q3LHN2 52 aa4.03□□□□□ -1.76
DNMT3A-201ENST00000264709 LCE3BQ5TA77 95 aa4.01□□□□□ -1.77
DNMT3A-201ENST00000264709 KRTAP9-8Q9BYQ0 159 aa3.99□□□□□ -1.77
DNMT3A-201ENST00000264709 LCE2CQ5TA81 110 aa3.95□□□□□ -1.78
DNMT3A-201ENST00000264709 MUC17Q685J3 4493 aa3.95□□□□□ -1.78
DNMT3A-201ENST00000264709 MT1LQ93083 61 aa3.91□□□□□ -1.78
DNMT3A-201ENST00000264709 SPRR2EP22531 72 aa3.9□□□□□ -1.79
DNMT3A-201ENST00000264709 SPRR2BP35325 72 aa3.9□□□□□ -1.79
DNMT3A-201ENST00000264709 SPRR2AP35326 72 aa3.9□□□□□ -1.79
DNMT3A-201ENST00000264709 KRTAP9-3Q9BYQ3 159 aa3.89□□□□□ -1.79
DNMT3A-201ENST00000264709 KMT2CQ8NEZ4 4911 aaKnown RBP3.89□□□□□ -1.79
DNMT3A-201ENST00000264709 MT1GP13640 62 aa3.89□□□□□ -1.79
DNMT3A-201ENST00000264709 MT3P25713 68 aa3.89□□□□□ -1.79
DNMT3A-201ENST00000264709 LCE2BO14633 110 aa3.88□□□□□ -1.79
DNMT3A-201ENST00000264709 KRTAP2-3P0C7H8 128 aa3.88□□□□□ -1.79
DNMT3A-201ENST00000264709 KRTAP2-4Q9BYR9 128 aa3.88□□□□□ -1.79
DNMT3A-201ENST00000264709 KRTAP2-1Q9BYU5 128 aa3.88□□□□□ -1.79
DNMT3A-201ENST00000264709 KRTAP17-1Q9BYP8 105 aa3.86□□□□□ -1.79
DNMT3A-201ENST00000264709 HYDINQ4G0P3 5121 aa3.85□□□□□ -1.79
DNMT3A-201ENST00000264709 SPRR2DP22532 72 aa3.82□□□□□ -1.8
DNMT3A-201ENST00000264709 LCE3DQ9BYE3 92 aa3.8□□□□□ -1.8
DNMT3A-201ENST00000264709 LCE3EQ5T5B0 92 aa3.79□□□□□ -1.8
DNMT3A-201ENST00000264709 MT1EP04732 61 aa3.77□□□□□ -1.81
DNMT3A-201ENST00000264709 HERC2O95714 4834 aa3.72□□□□□ -1.81
DNMT3A-201ENST00000264709 KRTAP19-3Q7Z4W3 81 aa3.71□□□□□ -1.82
DNMT3A-201ENST00000264709 KRTAP4-8A0A0G2JLE6 195 aa3.64□□□□□ -1.83
DNMT3A-201ENST00000264709 KRTAP4-8Q9BYQ9 185 aa3.64□□□□□ -1.83
DNMT3A-201ENST00000264709 BIRC6Q9NR09 4857 aa3.59□□□□□ -1.83
DNMT3A-201ENST00000264709 KRTAP19-7Q3SYF9 63 aa3.59□□□□□ -1.83
DNMT3A-201ENST00000264709 MT1MQ8N339 61 aa3.58□□□□□ -1.84
DNMT3A-201ENST00000264709 HERC1Q15751 4861 aa3.55□□□□□ -1.84
DNMT3A-201ENST00000264709 MT1AP04731 61 aa3.55□□□□□ -1.84
DNMT3A-201ENST00000264709 PRM1P04553 51 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms