RNA–Protein interactions for RNA: ENST00000264187.6

NID1-201, Transcript of nidogen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NID1, Length 5,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-201ENST00000264187 TRRAPQ9Y4A5 3859 aa6.06□□□□□ -1.44
NID1-201ENST00000264187 ZNF469Q96JG9 3925 aaPredicted RBP5.93□□□□□ -1.46
NID1-201ENST00000264187 HUWE1Q7Z6Z7 4374 aaKnown RBP5.92□□□□□ -1.46
NID1-201ENST00000264187 CSMD3Q7Z407 3707 aa5.88□□□□□ -1.47
NID1-201ENST00000264187 SPRR2FQ96RM1 72 aa5.87□□□□□ -1.47
NID1-201ENST00000264187 KRTAP10-7P60409 375 aaPredicted RBP5.86□□□□□ -1.47
NID1-201ENST00000264187 KRTAP4-1Q9BYQ7 146 aa5.85□□□□□ -1.47
NID1-201ENST00000264187 MT1HP80294 61 aa5.82□□□□□ -1.48
NID1-201ENST00000264187 KRTAP19-5Q3LI72 72 aa5.82□□□□□ -1.48
NID1-201ENST00000264187 MT2AP02795 61 aa5.77□□□□□ -1.49
NID1-201ENST00000264187 LCE3CQ5T5A8 94 aa5.72□□□□□ -1.49
NID1-201ENST00000264187 ALMS1Q8TCU4 4167 aa5.71□□□□□ -1.49
NID1-201ENST00000264187 AKAP9Q99996 3911 aa5.66□□□□□ -1.5
NID1-201ENST00000264187 FAT1Q14517 4588 aa5.66□□□□□ -1.5
NID1-201ENST00000264187 MT1FP04733 61 aa5.66□□□□□ -1.5
NID1-201ENST00000264187 SPRR2GQ9BYE4 73 aa5.66□□□□□ -1.5
NID1-201ENST00000264187 DNAH5Q8TE73 4624 aa5.65□□□□□ -1.5
NID1-201ENST00000264187 PLECQ15149 4684 aaKnown RBP5.58□□□□□ -1.52
NID1-201ENST00000264187 LCE3BQ5TA77 95 aa5.58□□□□□ -1.52
NID1-201ENST00000264187 DNAH10Q8IVF4 4471 aa5.58□□□□□ -1.52
NID1-201ENST00000264187 DNAH2Q9P225 4427 aa5.49□□□□□ -1.53
NID1-201ENST00000264187 SPRR2EP22531 72 aa5.48□□□□□ -1.53
NID1-201ENST00000264187 SPRR2BP35325 72 aa5.48□□□□□ -1.53
NID1-201ENST00000264187 SPRR2AP35326 72 aa5.48□□□□□ -1.53
NID1-201ENST00000264187 DNAH11Q96DT5 4516 aa5.46□□□□□ -1.54
NID1-201ENST00000264187 DNAH1Q9P2D7 4330 aa5.45□□□□□ -1.54
NID1-201ENST00000264187 DNAH9Q9NYC9 4486 aa5.43□□□□□ -1.54
NID1-201ENST00000264187 KRTAP12-4P60329 112 aa5.42□□□□□ -1.54
NID1-201ENST00000264187 MT1GP13640 62 aa5.41□□□□□ -1.54
NID1-201ENST00000264187 DNAH8Q96JB1 4490 aa5.39□□□□□ -1.55
NID1-201ENST00000264187 DNAH17Q9UFH2 4485 aa5.37□□□□□ -1.55
NID1-201ENST00000264187 SPRR2DP22532 72 aa5.28□□□□□ -1.56
NID1-201ENST00000264187 DNHD1Q96M86 4753 aa5.28□□□□□ -1.56
NID1-201ENST00000264187 RYR1P21817 5038 aa5.26□□□□□ -1.57
NID1-201ENST00000264187 LCE2BO14633 110 aa5.22□□□□□ -1.57
NID1-201ENST00000264187 SACSQ9NZJ4 4579 aa5.22□□□□□ -1.57
NID1-201ENST00000264187 KRTAP19-4Q3LI73 84 aa5.21□□□□□ -1.57
NID1-201ENST00000264187 DYNC1H1Q14204 4646 aaKnown RBP5.21□□□□□ -1.58
NID1-201ENST00000264187 LRP1BQ9NZR2 4599 aa5.19□□□□□ -1.58
NID1-201ENST00000264187 KRTAP4-8A0A0G2JLE6 195 aa5.18□□□□□ -1.58
NID1-201ENST00000264187 KRTAP19-1Q8IUB9 90 aa5.18□□□□□ -1.58
NID1-201ENST00000264187 KRTAP4-8Q9BYQ9 185 aa5.18□□□□□ -1.58
NID1-201ENST00000264187 LCE3DQ9BYE3 92 aa5.18□□□□□ -1.58
NID1-201ENST00000264187 MT1XP80297 61 aa5.17□□□□□ -1.58
NID1-201ENST00000264187 KRTAP19-8Q3LI54 63 aa5.13□□□□□ -1.59
NID1-201ENST00000264187 FAT3Q8TDW7 4589 aa5.13□□□□□ -1.59
NID1-201ENST00000264187 PRKDCP78527 4128 aaKnown RBP5.12□□□□□ -1.59
NID1-201ENST00000264187 APOBP04114 4563 aaKnown RBP5.12□□□□□ -1.59
NID1-201ENST00000264187 ANK2Q01484 3957 aa5.12□□□□□ -1.59
NID1-201ENST00000264187 FAT2Q9NYQ8 4349 aa5.1□□□□□ -1.59
NID1-201ENST00000264187 SPRR5A0A1B0GTR4 108 aa5.09□□□□□ -1.59
NID1-201ENST00000264187 VPS13BQ7Z7G8 4022 aa5.08□□□□□ -1.6
NID1-201ENST00000264187 LCE3EQ5T5B0 92 aa5.07□□□□□ -1.6
NID1-201ENST00000264187 STARD9Q9P2P6 4700 aa5.07□□□□□ -1.6
NID1-201ENST00000264187 VPS13DQ5THJ4 4388 aa5.06□□□□□ -1.6
NID1-201ENST00000264187 MT1BP07438 61 aa5.03□□□□□ -1.6
NID1-201ENST00000264187 LRP1Q07954 4544 aaKnown RBP5.01□□□□□ -1.61
NID1-201ENST00000264187 KMT2AQ03164 3969 aa5□□□□□ -1.61
NID1-201ENST00000264187 LYSTQ99698 3801 aa4.98□□□□□ -1.61
NID1-201ENST00000264187 KRTAP4-7Q9BYR0 210 aa4.98□□□□□ -1.61
NID1-201ENST00000264187 CMYA5Q8N3K9 4069 aa4.97□□□□□ -1.61
NID1-201ENST00000264187 DYNC2H1Q8NCM8 4307 aaKnown RBP4.96□□□□□ -1.62
NID1-201ENST00000264187 MYCBP2O75592 4640 aa4.95□□□□□ -1.62
NID1-201ENST00000264187 DNAH3Q8TD57 4116 aa4.92□□□□□ -1.62
NID1-201ENST00000264187 LCE2CQ5TA81 110 aa4.92□□□□□ -1.62
NID1-201ENST00000264187 KRTAP9-8Q9BYQ0 159 aa4.9□□□□□ -1.62
NID1-201ENST00000264187 RYR3Q15413 4870 aa4.89□□□□□ -1.63
NID1-201ENST00000264187 LCE2DQ5TA82 110 aaPredicted RBP4.88□□□□□ -1.63
NID1-201ENST00000264187 KRTAP17-1Q9BYP8 105 aa4.86□□□□□ -1.63
NID1-201ENST00000264187 DNAH7Q8WXX0 4024 aa4.85□□□□□ -1.63
NID1-201ENST00000264187 KRTAP19-3Q7Z4W3 81 aa4.82□□□□□ -1.64
NID1-201ENST00000264187 PRM1P04553 51 aa4.81□□□□□ -1.64
NID1-201ENST00000264187 MT4P47944 62 aa4.81□□□□□ -1.64
NID1-201ENST00000264187 KRTAP9-3Q9BYQ3 159 aa4.8□□□□□ -1.64
NID1-201ENST00000264187 LCE1BQ5T7P3 118 aa4.77□□□□□ -1.65
NID1-201ENST00000264187 MT1LQ93083 61 aa4.75□□□□□ -1.65
NID1-201ENST00000264187 DNAH6Q9C0G6 4158 aa4.75□□□□□ -1.65
NID1-201ENST00000264187 FRAS1Q86XX4 4008 aa4.74□□□□□ -1.65
NID1-201ENST00000264187 HYDINQ4G0P3 5121 aa4.72□□□□□ -1.65
NID1-201ENST00000264187 KIAA1109Q2LD37 5005 aa4.71□□□□□ -1.66
NID1-201ENST00000264187 LOC100996750A0A140TA64 210 aa4.71□□□□□ -1.66
NID1-201ENST00000264187 LCE1DQ5T752 114 aa4.7□□□□□ -1.66
NID1-201ENST00000264187 MT1EP04732 61 aa4.67□□□□□ -1.66
NID1-201ENST00000264187 MT3P25713 68 aa4.67□□□□□ -1.66
NID1-201ENST00000264187 PKHD1P08F94 4074 aa4.63□□□□□ -1.67
NID1-201ENST00000264187 HECTD4Q9Y4D8 3996 aa4.63□□□□□ -1.67
NID1-201ENST00000264187 PKD1P98161 4303 aa4.63□□□□□ -1.67
NID1-201ENST00000264187 KRTAP4-3Q9BYR4 195 aa4.62□□□□□ -1.67
NID1-201ENST00000264187 SYNE1Q8NF91 8797 aaKnown RBP4.61□□□□□ -1.67
NID1-201ENST00000264187 MT1MQ8N339 61 aa4.58□□□□□ -1.68
NID1-201ENST00000264187 KMT2CQ8NEZ4 4911 aaKnown RBP4.57□□□□□ -1.68
NID1-201ENST00000264187 HERC1Q15751 4861 aa4.57□□□□□ -1.68
NID1-201ENST00000264187 RYR2Q92736 4967 aa4.54□□□□□ -1.68
NID1-201ENST00000264187 LRP2P98164 4655 aa4.51□□□□□ -1.69
NID1-201ENST00000264187 PCLOQ9Y6V0 5065 aa4.5□□□□□ -1.69
NID1-201ENST00000264187 LPAP08519 4548 aa4.49□□□□□ -1.69
NID1-201ENST00000264187 KRTAP4-9Q9BYQ8 210 aa4.48□□□□□ -1.69
NID1-201ENST00000264187 EPPK1P58107 5090 aaKnown RBP4.46□□□□□ -1.7
NID1-201ENST00000264187 HERC2O95714 4834 aa4.44□□□□□ -1.7
NID1-201ENST00000264187 LCE5AQ5TCM9 118 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms