RNA–Protein interactions for RNA: ENST00000263228.3

UBE2R2-201, Transcript of ubiquitin conjugating enzyme E2 R2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2R2, Length 4,075 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2R2-201ENST00000263228 DNAH5Q8TE73 4624 aa8.61□□□□□ -1.03
UBE2R2-201ENST00000263228 SEC61BP60468 96 aaKnown RBP8.57□□□□□ -1.04
UBE2R2-201ENST00000263228 VPS13BQ7Z7G8 4022 aa8.55□□□□□ -1.04
UBE2R2-201ENST00000263228 KRTAP10-8P60410 259 aa8.54□□□□□ -1.04
UBE2R2-201ENST00000263228 KRTAP13-4Q3LI77 160 aa8.51□□□□□ -1.05
UBE2R2-201ENST00000263228 HYDINQ4G0P3 5121 aa8.5□□□□□ -1.05
UBE2R2-201ENST00000263228 KRTAP12-2P59991 146 aa8.49□□□□□ -1.05
UBE2R2-201ENST00000263228 TPRXLQ17RH7 258 aa8.49□□□□□ -1.05
UBE2R2-201ENST00000263228 A0A0A0MQY5 61 aa8.44□□□□□ -1.06
UBE2R2-201ENST00000263228 A0A1B0GVY2 172 aa8.44□□□□□ -1.06
UBE2R2-201ENST00000263228 FAT2Q9NYQ8 4349 aa8.4□□□□□ -1.07
UBE2R2-201ENST00000263228 FAT1Q14517 4588 aa8.39□□□□□ -1.07
UBE2R2-201ENST00000263228 PKHD1P08F94 4074 aa8.37□□□□□ -1.07
UBE2R2-201ENST00000263228 KRTAP10-6P60371 365 aaPredicted RBP8.35□□□□□ -1.07
UBE2R2-201ENST00000263228 MYCBP2O75592 4640 aa8.34□□□□□ -1.07
UBE2R2-201ENST00000263228 PLAC4Q8WY50 150 aa8.33□□□□□ -1.08
UBE2R2-201ENST00000263228 PKD1P98161 4303 aa8.31□□□□□ -1.08
UBE2R2-201ENST00000263228 KRTAP12-1P59990 96 aa8.27□□□□□ -1.09
UBE2R2-201ENST00000263228 DYNC1H1Q14204 4646 aaKnown RBP8.2□□□□□ -1.1
UBE2R2-201ENST00000263228 KRTAP10-4P60372 401 aaPredicted RBP8.17□□□□□ -1.1
UBE2R2-201ENST00000263228 KRTAP3-3Q9BYR6 98 aa8.16□□□□□ -1.1
UBE2R2-201ENST00000263228 SACSQ9NZJ4 4579 aa8.14□□□□□ -1.11
UBE2R2-201ENST00000263228 TNP1P09430 55 aa8.13□□□□□ -1.11
UBE2R2-201ENST00000263228 KRTAP3-2Q9BYR7 98 aa8.13□□□□□ -1.11
UBE2R2-201ENST00000263228 LRP1Q07954 4544 aaKnown RBP8.06□□□□□ -1.12
UBE2R2-201ENST00000263228 FAT3Q8TDW7 4589 aa8.03□□□□□ -1.12
UBE2R2-201ENST00000263228 APOBP04114 4563 aaKnown RBP7.98□□□□□ -1.13
UBE2R2-201ENST00000263228 KMT2CQ8NEZ4 4911 aaKnown RBP7.93□□□□□ -1.14
UBE2R2-201ENST00000263228 RYR2Q92736 4967 aa7.92□□□□□ -1.14
UBE2R2-201ENST00000263228 HSPG2P98160 4391 aa7.87□□□□□ -1.15
UBE2R2-201ENST00000263228 MT1HL1P0DM35 61 aa7.85□□□□□ -1.15
UBE2R2-201ENST00000263228 KRTAP15-1Q3LI76 137 aa7.85□□□□□ -1.15
UBE2R2-201ENST00000263228 RYR1P21817 5038 aa7.85□□□□□ -1.15
UBE2R2-201ENST00000263228 PP632Q6XCG6 107 aa7.85□□□□□ -1.15
UBE2R2-201ENST00000263228 PKHD1L1Q86WI1 4243 aa7.82□□□□□ -1.16
UBE2R2-201ENST00000263228 LORP23490 312 aaPredicted RBP7.82□□□□□ -1.16
UBE2R2-201ENST00000263228 KRTAP4-5Q9BYR2 181 aa7.81□□□□□ -1.16
UBE2R2-201ENST00000263228 KIAA1109Q2LD37 5005 aa7.81□□□□□ -1.16
UBE2R2-201ENST00000263228 KRTAP10-10P60014 251 aa7.8□□□□□ -1.16
UBE2R2-201ENST00000263228 RYR3Q15413 4870 aa7.76□□□□□ -1.17
UBE2R2-201ENST00000263228 KRTAP17-1Q9BYP8 105 aa7.7□□□□□ -1.18
UBE2R2-201ENST00000263228 LPAP08519 4548 aa7.68□□□□□ -1.18
UBE2R2-201ENST00000263228 LRP2P98164 4655 aa7.67□□□□□ -1.18
UBE2R2-201ENST00000263228 TNXBP22105 4242 aa7.64□□□□□ -1.19
UBE2R2-201ENST00000263228 EPPK1P58107 5090 aaKnown RBP7.43□□□□□ -1.22
UBE2R2-201ENST00000263228 KRTAP4-1Q9BYQ7 146 aa7.41□□□□□ -1.22
UBE2R2-201ENST00000263228 ABCA13Q86UQ4 5058 aa7.36□□□□□ -1.23
UBE2R2-201ENST00000263228 HERC2O95714 4834 aa7.24□□□□□ -1.25
UBE2R2-201ENST00000263228 LCE3AQ5TA76 89 aa7.16□□□□□ -1.26
UBE2R2-201ENST00000263228 MUC2Q02817 5179 aa7.16□□□□□ -1.26
UBE2R2-201ENST00000263228 PRO2289Q9P1D8 64 aa7.1□□□□□ -1.27
UBE2R2-201ENST00000263228 BIRC6Q9NR09 4857 aa7.01□□□□□ -1.29
UBE2R2-201ENST00000263228 KRTAP10-12P60413 245 aa6.96□□□□□ -1.29
UBE2R2-201ENST00000263228 MUC17Q685J3 4493 aa6.95□□□□□ -1.3
UBE2R2-201ENST00000263228 KRTAP12-3P60328 96 aa6.94□□□□□ -1.3
UBE2R2-201ENST00000263228 PCLOQ9Y6V0 5065 aa6.88□□□□□ -1.31
UBE2R2-201ENST00000263228 CRCT1Q9UGL9 99 aa6.84□□□□□ -1.31
UBE2R2-201ENST00000263228 KRTAP19-2Q3LHN2 52 aa6.82□□□□□ -1.32
UBE2R2-201ENST00000263228 HERC1Q15751 4861 aa6.8□□□□□ -1.32
UBE2R2-201ENST00000263228 FAT4Q6V0I7 4981 aa6.79□□□□□ -1.32
UBE2R2-201ENST00000263228 RNF213Q63HN8 5207 aa6.74□□□□□ -1.33
UBE2R2-201ENST00000263228 MT1FP04733 61 aa6.69□□□□□ -1.34
UBE2R2-201ENST00000263228 FSIP2Q5CZC0 6907 aa6.68□□□□□ -1.34
UBE2R2-201ENST00000263228 MT2AP02795 61 aa6.68□□□□□ -1.34
UBE2R2-201ENST00000263228 MT1HP80294 61 aa6.66□□□□□ -1.34
UBE2R2-201ENST00000263228 OBSCNQ5VST9 7968 aa6.66□□□□□ -1.34
UBE2R2-201ENST00000263228 FLGP20930 4061 aaPredicted RBP6.65□□□□□ -1.34
UBE2R2-201ENST00000263228 UBR4Q5T4S7 5183 aa6.63□□□□□ -1.35
UBE2R2-201ENST00000263228 KRTAP23-1A1A580 65 aa6.62□□□□□ -1.35
UBE2R2-201ENST00000263228 INE1O15225 51 aa6.61□□□□□ -1.35
UBE2R2-201ENST00000263228 KRTAP19-1Q8IUB9 90 aa6.6□□□□□ -1.35
UBE2R2-201ENST00000263228 SPRR2GQ9BYE4 73 aa6.59□□□□□ -1.35
UBE2R2-201ENST00000263228 HMCN2Q8NDA2 5059 aa6.58□□□□□ -1.36
UBE2R2-201ENST00000263228 LCE2CQ5TA81 110 aa6.55□□□□□ -1.36
UBE2R2-201ENST00000263228 SYNE1Q8NF91 8797 aaKnown RBP6.48□□□□□ -1.37
UBE2R2-201ENST00000263228 KRTAP10-7P60409 375 aaPredicted RBP6.45□□□□□ -1.38
UBE2R2-201ENST00000263228 KRTAP19-5Q3LI72 72 aa6.4□□□□□ -1.38
UBE2R2-201ENST00000263228 KRTAP8-1Q8IUC2 63 aa6.4□□□□□ -1.39
UBE2R2-201ENST00000263228 SPRR5A0A1B0GTR4 108 aa6.34□□□□□ -1.39
UBE2R2-201ENST00000263228 KRTAP10-5P60370 271 aa6.32□□□□□ -1.4
UBE2R2-201ENST00000263228 KRTAP9-8Q9BYQ0 159 aa6.3□□□□□ -1.4
UBE2R2-201ENST00000263228 MT1XP80297 61 aa6.28□□□□□ -1.4
UBE2R2-201ENST00000263228 KRTAP4-8A0A0G2JLE6 195 aa6.27□□□□□ -1.41
UBE2R2-201ENST00000263228 KRTAP4-8Q9BYQ9 185 aa6.27□□□□□ -1.41
UBE2R2-201ENST00000263228 MT1BP07438 61 aa6.23□□□□□ -1.41
UBE2R2-201ENST00000263228 LCE3CQ5T5A8 94 aa6.19□□□□□ -1.42
UBE2R2-201ENST00000263228 KRTAP19-8Q3LI54 63 aa6.14□□□□□ -1.43
UBE2R2-201ENST00000263228 USH2AO75445 5202 aa6.13□□□□□ -1.43
UBE2R2-201ENST00000263228 KRTAP4-7Q9BYR0 210 aa6.12□□□□□ -1.43
UBE2R2-201ENST00000263228 DSTQ03001 7570 aaKnown RBP6.12□□□□□ -1.43
UBE2R2-201ENST00000263228 KMT2DO14686 5537 aa6.07□□□□□ -1.44
UBE2R2-201ENST00000263228 FCGBPQ9Y6R7 5405 aaPredicted RBP6.06□□□□□ -1.44
UBE2R2-201ENST00000263228 KRTAP9-3Q9BYQ3 159 aa6.05□□□□□ -1.44
UBE2R2-201ENST00000263228 LCE2BO14633 110 aa5.87□□□□□ -1.47
UBE2R2-201ENST00000263228 MT1GP13640 62 aa5.84□□□□□ -1.47
UBE2R2-201ENST00000263228 SPRR2FQ96RM1 72 aa5.8□□□□□ -1.48
UBE2R2-201ENST00000263228 LCE2AQ5TA79 106 aaPredicted RBP5.79□□□□□ -1.48
UBE2R2-201ENST00000263228 LCE3BQ5TA77 95 aa5.74□□□□□ -1.49
UBE2R2-201ENST00000263228 KRTAP12-4P60329 112 aa5.73□□□□□ -1.49
UBE2R2-201ENST00000263228 LOC100996750A0A140TA64 210 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms