RNA–Protein interactions for RNA: ENST00000262963.10

PTPRS-201, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

TSL 5 BASIC

Gene PTPRS, Length 4,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-201ENST00000262963 VPS13DQ5THJ4 4388 aa5.72□□□□□ -1.49
PTPRS-201ENST00000262963 PRKDCP78527 4128 aaKnown RBP5.68□□□□□ -1.5
PTPRS-201ENST00000262963 FAT1Q14517 4588 aa5.68□□□□□ -1.5
PTPRS-201ENST00000262963 KRTAP3-3Q9BYR6 98 aa5.67□□□□□ -1.5
PTPRS-201ENST00000262963 KRTAP4-5Q9BYR2 181 aa5.67□□□□□ -1.5
PTPRS-201ENST00000262963 DNAH17Q9UFH2 4485 aa5.66□□□□□ -1.5
PTPRS-201ENST00000262963 KRTAP3-2Q9BYR7 98 aa5.63□□□□□ -1.51
PTPRS-201ENST00000262963 LRP1BQ9NZR2 4599 aa5.61□□□□□ -1.51
PTPRS-201ENST00000262963 DYNC1H1Q14204 4646 aaKnown RBP5.6□□□□□ -1.51
PTPRS-201ENST00000262963 ANK2Q01484 3957 aa5.6□□□□□ -1.51
PTPRS-201ENST00000262963 ALMS1Q8TCU4 4167 aa5.6□□□□□ -1.51
PTPRS-201ENST00000262963 DNAH2Q9P225 4427 aa5.58□□□□□ -1.52
PTPRS-201ENST00000262963 KMT2AQ03164 3969 aa5.57□□□□□ -1.52
PTPRS-201ENST00000262963 DNAH8Q96JB1 4490 aa5.56□□□□□ -1.52
PTPRS-201ENST00000262963 KRTAP15-1Q3LI76 137 aa5.51□□□□□ -1.53
PTPRS-201ENST00000262963 LYSTQ99698 3801 aa5.49□□□□□ -1.53
PTPRS-201ENST00000262963 RYR1P21817 5038 aa5.47□□□□□ -1.53
PTPRS-201ENST00000262963 DNAH3Q8TD57 4116 aa5.46□□□□□ -1.54
PTPRS-201ENST00000262963 MYCBP2O75592 4640 aa5.42□□□□□ -1.54
PTPRS-201ENST00000262963 DYNC2H1Q8NCM8 4307 aaKnown RBP5.41□□□□□ -1.54
PTPRS-201ENST00000262963 KIAA1109Q2LD37 5005 aa5.4□□□□□ -1.54
PTPRS-201ENST00000262963 SACSQ9NZJ4 4579 aa5.4□□□□□ -1.55
PTPRS-201ENST00000262963 VPS13BQ7Z7G8 4022 aa5.39□□□□□ -1.55
PTPRS-201ENST00000262963 CMYA5Q8N3K9 4069 aa5.39□□□□□ -1.55
PTPRS-201ENST00000262963 FAT2Q9NYQ8 4349 aa5.36□□□□□ -1.55
PTPRS-201ENST00000262963 FRAS1Q86XX4 4008 aa5.33□□□□□ -1.56
PTPRS-201ENST00000262963 LORP23490 312 aaPredicted RBP5.33□□□□□ -1.56
PTPRS-201ENST00000262963 KRTAP10-12P60413 245 aa5.33□□□□□ -1.56
PTPRS-201ENST00000262963 DNAH6Q9C0G6 4158 aa5.32□□□□□ -1.56
PTPRS-201ENST00000262963 DNAH7Q8WXX0 4024 aa5.3□□□□□ -1.56
PTPRS-201ENST00000262963 RYR3Q15413 4870 aa5.3□□□□□ -1.56
PTPRS-201ENST00000262963 APOBP04114 4563 aaKnown RBP5.29□□□□□ -1.56
PTPRS-201ENST00000262963 LRP1Q07954 4544 aaKnown RBP5.27□□□□□ -1.57
PTPRS-201ENST00000262963 KRTAP4-1Q9BYQ7 146 aa5.25□□□□□ -1.57
PTPRS-201ENST00000262963 HECTD4Q9Y4D8 3996 aa5.25□□□□□ -1.57
PTPRS-201ENST00000262963 FAT3Q8TDW7 4589 aa5.24□□□□□ -1.57
PTPRS-201ENST00000262963 KRTAP23-1A1A580 65 aa5.23□□□□□ -1.57
PTPRS-201ENST00000262963 HYDINQ4G0P3 5121 aa5.2□□□□□ -1.58
PTPRS-201ENST00000262963 KRTAP12-3P60328 96 aa5.2□□□□□ -1.58
PTPRS-201ENST00000262963 INE1O15225 51 aa5.18□□□□□ -1.58
PTPRS-201ENST00000262963 KRTAP17-1Q9BYP8 105 aa5.16□□□□□ -1.58
PTPRS-201ENST00000262963 PKHD1P08F94 4074 aa5.15□□□□□ -1.59
PTPRS-201ENST00000262963 RYR2Q92736 4967 aa5.11□□□□□ -1.59
PTPRS-201ENST00000262963 LCE3AQ5TA76 89 aa5.11□□□□□ -1.59
PTPRS-201ENST00000262963 CRCT1Q9UGL9 99 aa5.08□□□□□ -1.6
PTPRS-201ENST00000262963 LRP2P98164 4655 aa5.04□□□□□ -1.6
PTPRS-201ENST00000262963 HERC2O95714 4834 aa5.02□□□□□ -1.61
PTPRS-201ENST00000262963 KMT2CQ8NEZ4 4911 aaKnown RBP4.99□□□□□ -1.61
PTPRS-201ENST00000262963 MT1HP80294 61 aa4.96□□□□□ -1.62
PTPRS-201ENST00000262963 HSPG2P98160 4391 aa4.94□□□□□ -1.62
PTPRS-201ENST00000262963 KRTAP8-1Q8IUC2 63 aa4.91□□□□□ -1.62
PTPRS-201ENST00000262963 PKD1P98161 4303 aa4.91□□□□□ -1.62
PTPRS-201ENST00000262963 MT2AP02795 61 aa4.91□□□□□ -1.62
PTPRS-201ENST00000262963 SPRR2GQ9BYE4 73 aa4.88□□□□□ -1.63
PTPRS-201ENST00000262963 MT1FP04733 61 aa4.85□□□□□ -1.63
PTPRS-201ENST00000262963 LPAP08519 4548 aa4.78□□□□□ -1.64
PTPRS-201ENST00000262963 BIRC6Q9NR09 4857 aa4.75□□□□□ -1.65
PTPRS-201ENST00000262963 KRTAP10-5P60370 271 aa4.74□□□□□ -1.65
PTPRS-201ENST00000262963 KRTAP19-1Q8IUB9 90 aa4.72□□□□□ -1.65
PTPRS-201ENST00000262963 EPPK1P58107 5090 aaKnown RBP4.71□□□□□ -1.66
PTPRS-201ENST00000262963 PCLOQ9Y6V0 5065 aa4.7□□□□□ -1.66
PTPRS-201ENST00000262963 HERC1Q15751 4861 aa4.68□□□□□ -1.66
PTPRS-201ENST00000262963 TNXBP22105 4242 aa4.66□□□□□ -1.66
PTPRS-201ENST00000262963 ABCA13Q86UQ4 5058 aa4.65□□□□□ -1.67
PTPRS-201ENST00000262963 PKHD1L1Q86WI1 4243 aa4.64□□□□□ -1.67
PTPRS-201ENST00000262963 LCE2CQ5TA81 110 aa4.61□□□□□ -1.67
PTPRS-201ENST00000262963 KRTAP19-5Q3LI72 72 aa4.6□□□□□ -1.67
PTPRS-201ENST00000262963 KRTAP19-8Q3LI54 63 aa4.59□□□□□ -1.68
PTPRS-201ENST00000262963 KRTAP19-4Q3LI73 84 aa4.58□□□□□ -1.68
PTPRS-201ENST00000262963 SPRR2FQ96RM1 72 aa4.56□□□□□ -1.68
PTPRS-201ENST00000262963 KRTAP9-8Q9BYQ0 159 aa4.56□□□□□ -1.68
PTPRS-201ENST00000262963 KRTAP19-2Q3LHN2 52 aa4.53□□□□□ -1.68
PTPRS-201ENST00000262963 LCE3CQ5T5A8 94 aa4.53□□□□□ -1.68
PTPRS-201ENST00000262963 MUC17Q685J3 4493 aa4.53□□□□□ -1.68
PTPRS-201ENST00000262963 KRTAP10-7P60409 375 aaPredicted RBP4.53□□□□□ -1.68
PTPRS-201ENST00000262963 MT1BP07438 61 aa4.51□□□□□ -1.69
PTPRS-201ENST00000262963 MT1XP80297 61 aa4.5□□□□□ -1.69
PTPRS-201ENST00000262963 FLGP20930 4061 aaPredicted RBP4.45□□□□□ -1.7
PTPRS-201ENST00000262963 KRTAP9-3Q9BYQ3 159 aa4.41□□□□□ -1.7
PTPRS-201ENST00000262963 MUC2Q02817 5179 aa4.39□□□□□ -1.71
PTPRS-201ENST00000262963 UBR4Q5T4S7 5183 aa4.38□□□□□ -1.71
PTPRS-201ENST00000262963 SPRR5A0A1B0GTR4 108 aa4.36□□□□□ -1.71
PTPRS-201ENST00000262963 RNF213Q63HN8 5207 aa4.36□□□□□ -1.71
PTPRS-201ENST00000262963 FAT4Q6V0I7 4981 aa4.35□□□□□ -1.71
PTPRS-201ENST00000262963 KRTAP4-8A0A0G2JLE6 195 aa4.32□□□□□ -1.72
PTPRS-201ENST00000262963 KRTAP4-8Q9BYQ9 185 aa4.32□□□□□ -1.72
PTPRS-201ENST00000262963 FSIP2Q5CZC0 6907 aa4.29□□□□□ -1.72
PTPRS-201ENST00000262963 HMCN2Q8NDA2 5059 aa4.26□□□□□ -1.73
PTPRS-201ENST00000262963 LCE2BO14633 110 aa4.26□□□□□ -1.73
PTPRS-201ENST00000262963 SPRR2EP22531 72 aa4.24□□□□□ -1.73
PTPRS-201ENST00000262963 SPRR2BP35325 72 aa4.24□□□□□ -1.73
PTPRS-201ENST00000262963 SPRR2AP35326 72 aa4.24□□□□□ -1.73
PTPRS-201ENST00000262963 MT1GP13640 62 aa4.19□□□□□ -1.74
PTPRS-201ENST00000262963 LCE3BQ5TA77 95 aa4.14□□□□□ -1.75
PTPRS-201ENST00000262963 SPRR2DP22532 72 aa4.1□□□□□ -1.75
PTPRS-201ENST00000262963 KRTAP12-4P60329 112 aa4.08□□□□□ -1.76
PTPRS-201ENST00000262963 KRTAP4-7Q9BYR0 210 aa4.07□□□□□ -1.76
PTPRS-201ENST00000262963 SYNE1Q8NF91 8797 aaKnown RBP4.07□□□□□ -1.76
PTPRS-201ENST00000262963 LCE2AQ5TA79 106 aaPredicted RBP4.02□□□□□ -1.77
PTPRS-201ENST00000262963 KRTAP19-3Q7Z4W3 81 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 148.6 ms