RNA–Protein interactions for RNA: ENST00000262461.6

SLC12A2-201, Transcript of solute carrier family 12 member 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLC12A2, Length 6,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A2-201ENST00000262461 MUC3AQ02505 3323 aa8.96□□□□□ -0.98
SLC12A2-201ENST00000262461 COL7A1Q02388 2944 aa8.93□□□□□ -0.98
SLC12A2-201ENST00000262461 AKAP9Q99996 3911 aa8.87□□□□□ -0.99
SLC12A2-201ENST00000262461 CSMD3Q7Z407 3707 aa8.78□□□□□ -1
SLC12A2-201ENST00000262461 SRRM2Q9UQ35 2752 aaKnown RBP8.77□□□□□ -1.01
SLC12A2-201ENST00000262461 KRTAP4-1Q9BYQ7 146 aa8.67□□□□□ -1.02
SLC12A2-201ENST00000262461 DNAH9Q9NYC9 4486 aa8.66□□□□□ -1.02
SLC12A2-201ENST00000262461 MT1HP80294 61 aa8.64□□□□□ -1.03
SLC12A2-201ENST00000262461 DNAH1Q9P2D7 4330 aa8.61□□□□□ -1.03
SLC12A2-201ENST00000262461 DNAH2Q9P225 4427 aa8.53□□□□□ -1.04
SLC12A2-201ENST00000262461 MT2AP02795 61 aa8.46□□□□□ -1.05
SLC12A2-201ENST00000262461 DNAH10Q8IVF4 4471 aa8.46□□□□□ -1.05
SLC12A2-201ENST00000262461 KRTAP19-5Q3LI72 72 aa8.45□□□□□ -1.06
SLC12A2-201ENST00000262461 SPRR2FQ96RM1 72 aa8.4□□□□□ -1.07
SLC12A2-201ENST00000262461 SPRR2GQ9BYE4 73 aa8.38□□□□□ -1.07
SLC12A2-201ENST00000262461 KRTAP10-7P60409 375 aaPredicted RBP8.38□□□□□ -1.07
SLC12A2-201ENST00000262461 DNAH3Q8TD57 4116 aa8.37□□□□□ -1.07
SLC12A2-201ENST00000262461 DNAH5Q8TE73 4624 aa8.37□□□□□ -1.07
SLC12A2-201ENST00000262461 LCE3CQ5T5A8 94 aa8.31□□□□□ -1.08
SLC12A2-201ENST00000262461 MT1FP04733 61 aa8.31□□□□□ -1.08
SLC12A2-201ENST00000262461 DNAH11Q96DT5 4516 aa8.26□□□□□ -1.09
SLC12A2-201ENST00000262461 DNAH8Q96JB1 4490 aa8.26□□□□□ -1.09
SLC12A2-201ENST00000262461 ZNF469Q96JG9 3925 aaPredicted RBP8.23□□□□□ -1.09
SLC12A2-201ENST00000262461 DNAH17Q9UFH2 4485 aa8.22□□□□□ -1.09
SLC12A2-201ENST00000262461 PLECQ15149 4684 aaKnown RBP8.21□□□□□ -1.1
SLC12A2-201ENST00000262461 FAT2Q9NYQ8 4349 aa8.15□□□□□ -1.1
SLC12A2-201ENST00000262461 VPS13DQ5THJ4 4388 aa8.13□□□□□ -1.11
SLC12A2-201ENST00000262461 ANK2Q01484 3957 aa8.11□□□□□ -1.11
SLC12A2-201ENST00000262461 DYNC2H1Q8NCM8 4307 aaKnown RBP8.03□□□□□ -1.12
SLC12A2-201ENST00000262461 LRP1BQ9NZR2 4599 aa7.97□□□□□ -1.13
SLC12A2-201ENST00000262461 SPRR2EP22531 72 aa7.94□□□□□ -1.14
SLC12A2-201ENST00000262461 SPRR2BP35325 72 aa7.94□□□□□ -1.14
SLC12A2-201ENST00000262461 SPRR2AP35326 72 aa7.94□□□□□ -1.14
SLC12A2-201ENST00000262461 LCE3BQ5TA77 95 aa7.93□□□□□ -1.14
SLC12A2-201ENST00000262461 FRAS1Q86XX4 4008 aa7.92□□□□□ -1.14
SLC12A2-201ENST00000262461 SACSQ9NZJ4 4579 aa7.91□□□□□ -1.14
SLC12A2-201ENST00000262461 DNAH7Q8WXX0 4024 aa7.89□□□□□ -1.15
SLC12A2-201ENST00000262461 STARD9Q9P2P6 4700 aa7.89□□□□□ -1.15
SLC12A2-201ENST00000262461 CMYA5Q8N3K9 4069 aa7.88□□□□□ -1.15
SLC12A2-201ENST00000262461 FAT1Q14517 4588 aa7.86□□□□□ -1.15
SLC12A2-201ENST00000262461 PRKDCP78527 4128 aaKnown RBP7.86□□□□□ -1.15
SLC12A2-201ENST00000262461 VPS13BQ7Z7G8 4022 aa7.85□□□□□ -1.15
SLC12A2-201ENST00000262461 DYNC1H1Q14204 4646 aaKnown RBP7.83□□□□□ -1.16
SLC12A2-201ENST00000262461 KMT2AQ03164 3969 aa7.82□□□□□ -1.16
SLC12A2-201ENST00000262461 DNAH6Q9C0G6 4158 aa7.8□□□□□ -1.16
SLC12A2-201ENST00000262461 MT1GP13640 62 aa7.76□□□□□ -1.17
SLC12A2-201ENST00000262461 KRTAP19-4Q3LI73 84 aa7.71□□□□□ -1.18
SLC12A2-201ENST00000262461 SPRR2DP22532 72 aa7.66□□□□□ -1.18
SLC12A2-201ENST00000262461 KRTAP19-8Q3LI54 63 aa7.65□□□□□ -1.19
SLC12A2-201ENST00000262461 MT1XP80297 61 aa7.64□□□□□ -1.19
SLC12A2-201ENST00000262461 KRTAP19-1Q8IUB9 90 aa7.64□□□□□ -1.19
SLC12A2-201ENST00000262461 KRTAP12-4P60329 112 aa7.63□□□□□ -1.19
SLC12A2-201ENST00000262461 APOBP04114 4563 aaKnown RBP7.6□□□□□ -1.19
SLC12A2-201ENST00000262461 LCE2BO14633 110 aa7.57□□□□□ -1.2
SLC12A2-201ENST00000262461 KRTAP4-8A0A0G2JLE6 195 aa7.49□□□□□ -1.21
SLC12A2-201ENST00000262461 KRTAP4-8Q9BYQ9 185 aa7.49□□□□□ -1.21
SLC12A2-201ENST00000262461 FAT3Q8TDW7 4589 aa7.45□□□□□ -1.22
SLC12A2-201ENST00000262461 MT1BP07438 61 aa7.45□□□□□ -1.22
SLC12A2-201ENST00000262461 KRTAP17-1Q9BYP8 105 aa7.44□□□□□ -1.22
SLC12A2-201ENST00000262461 LYSTQ99698 3801 aa7.43□□□□□ -1.22
SLC12A2-201ENST00000262461 RYR1P21817 5038 aa7.42□□□□□ -1.22
SLC12A2-201ENST00000262461 LCE3DQ9BYE3 92 aa7.35□□□□□ -1.23
SLC12A2-201ENST00000262461 HECTD4Q9Y4D8 3996 aa7.35□□□□□ -1.23
SLC12A2-201ENST00000262461 KRTAP9-8Q9BYQ0 159 aa7.34□□□□□ -1.23
SLC12A2-201ENST00000262461 LRP1Q07954 4544 aaKnown RBP7.29□□□□□ -1.24
SLC12A2-201ENST00000262461 DNHD1Q96M86 4753 aa7.29□□□□□ -1.24
SLC12A2-201ENST00000262461 LCE3EQ5T5B0 92 aa7.2□□□□□ -1.26
SLC12A2-201ENST00000262461 KRTAP9-3Q9BYQ3 159 aa7.19□□□□□ -1.26
SLC12A2-201ENST00000262461 SPRR5A0A1B0GTR4 108 aa7.18□□□□□ -1.26
SLC12A2-201ENST00000262461 RYR3Q15413 4870 aa7.15□□□□□ -1.26
SLC12A2-201ENST00000262461 KRTAP4-7Q9BYR0 210 aa7.14□□□□□ -1.27
SLC12A2-201ENST00000262461 LCE2CQ5TA81 110 aa7.07□□□□□ -1.28
SLC12A2-201ENST00000262461 PKD1P98161 4303 aa7.05□□□□□ -1.28
SLC12A2-201ENST00000262461 KRTAP19-3Q7Z4W3 81 aa7.04□□□□□ -1.28
SLC12A2-201ENST00000262461 PKHD1L1Q86WI1 4243 aa7.04□□□□□ -1.28
SLC12A2-201ENST00000262461 MYCBP2O75592 4640 aa7.02□□□□□ -1.29
SLC12A2-201ENST00000262461 HSPG2P98160 4391 aa7.01□□□□□ -1.29
SLC12A2-201ENST00000262461 LPAP08519 4548 aa6.99□□□□□ -1.29
SLC12A2-201ENST00000262461 LCE2DQ5TA82 110 aaPredicted RBP6.99□□□□□ -1.29
SLC12A2-201ENST00000262461 MT1LQ93083 61 aa6.97□□□□□ -1.29
SLC12A2-201ENST00000262461 HERC1Q15751 4861 aa6.89□□□□□ -1.31
SLC12A2-201ENST00000262461 MT1EP04732 61 aa6.89□□□□□ -1.31
SLC12A2-201ENST00000262461 MT4P47944 62 aa6.87□□□□□ -1.31
SLC12A2-201ENST00000262461 PRM1P04553 51 aa6.83□□□□□ -1.32
SLC12A2-201ENST00000262461 LOC100996750A0A140TA64 210 aa6.82□□□□□ -1.32
SLC12A2-201ENST00000262461 TNXBP22105 4242 aa6.76□□□□□ -1.33
SLC12A2-201ENST00000262461 MT1MQ8N339 61 aa6.72□□□□□ -1.33
SLC12A2-201ENST00000262461 RYR2Q92736 4967 aa6.71□□□□□ -1.34
SLC12A2-201ENST00000262461 MT3P25713 68 aa6.7□□□□□ -1.34
SLC12A2-201ENST00000262461 KRTAP4-3Q9BYR4 195 aa6.68□□□□□ -1.34
SLC12A2-201ENST00000262461 LCE1BQ5T7P3 118 aa6.67□□□□□ -1.34
SLC12A2-201ENST00000262461 PKHD1P08F94 4074 aa6.66□□□□□ -1.34
SLC12A2-201ENST00000262461 LCE1DQ5T752 114 aa6.6□□□□□ -1.35
SLC12A2-201ENST00000262461 MUC17Q685J3 4493 aa6.57□□□□□ -1.36
SLC12A2-201ENST00000262461 KRTAP19-2Q3LHN2 52 aa6.56□□□□□ -1.36
SLC12A2-201ENST00000262461 FLGP20930 4061 aaPredicted RBP6.55□□□□□ -1.36
SLC12A2-201ENST00000262461 LRP2P98164 4655 aa6.55□□□□□ -1.36
SLC12A2-201ENST00000262461 HYDINQ4G0P3 5121 aa6.52□□□□□ -1.37
SLC12A2-201ENST00000262461 KRTAP19-6Q3LI70 58 aa6.44□□□□□ -1.38
SLC12A2-201ENST00000262461 HERC2O95714 4834 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms