RNA–Protein interactions for RNA: ENST00000262059.8

CALCOCO1-201, Transcript of calcium binding and coiled-coil domain 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CALCOCO1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-201ENST00000262059 KRTAP10-4P60372 401 aaPredicted RBP4.59□□□□□ -1.67
CALCOCO1-201ENST00000262059 LORP23490 312 aaPredicted RBP4.58□□□□□ -1.68
CALCOCO1-201ENST00000262059 KRTAP10-5P60370 271 aa4.54□□□□□ -1.68
CALCOCO1-201ENST00000262059 CSMD3Q7Z407 3707 aa4.53□□□□□ -1.68
CALCOCO1-201ENST00000262059 DNAH9Q9NYC9 4486 aa4.49□□□□□ -1.69
CALCOCO1-201ENST00000262059 ZNF469Q96JG9 3925 aaPredicted RBP4.43□□□□□ -1.7
CALCOCO1-201ENST00000262059 KRTAP8-1Q8IUC2 63 aa4.43□□□□□ -1.7
CALCOCO1-201ENST00000262059 ANK2Q01484 3957 aa4.43□□□□□ -1.7
CALCOCO1-201ENST00000262059 DNAH1Q9P2D7 4330 aa4.41□□□□□ -1.7
CALCOCO1-201ENST00000262059 DNAH5Q8TE73 4624 aa4.36□□□□□ -1.71
CALCOCO1-201ENST00000262059 DNAH10Q8IVF4 4471 aa4.35□□□□□ -1.71
CALCOCO1-201ENST00000262059 PLECQ15149 4684 aaKnown RBP4.35□□□□□ -1.71
CALCOCO1-201ENST00000262059 DNAH11Q96DT5 4516 aa4.31□□□□□ -1.72
CALCOCO1-201ENST00000262059 DNAH17Q9UFH2 4485 aa4.31□□□□□ -1.72
CALCOCO1-201ENST00000262059 CMYA5Q8N3K9 4069 aa4.29□□□□□ -1.72
CALCOCO1-201ENST00000262059 DNAH2Q9P225 4427 aa4.28□□□□□ -1.72
CALCOCO1-201ENST00000262059 VPS13DQ5THJ4 4388 aa4.26□□□□□ -1.73
CALCOCO1-201ENST00000262059 DNAH3Q8TD57 4116 aa4.23□□□□□ -1.73
CALCOCO1-201ENST00000262059 DNAH8Q96JB1 4490 aa4.23□□□□□ -1.73
CALCOCO1-201ENST00000262059 DNAH6Q9C0G6 4158 aa4.22□□□□□ -1.73
CALCOCO1-201ENST00000262059 SPRR2FQ96RM1 72 aa4.19□□□□□ -1.74
CALCOCO1-201ENST00000262059 DYNC2H1Q8NCM8 4307 aaKnown RBP4.19□□□□□ -1.74
CALCOCO1-201ENST00000262059 DNHD1Q96M86 4753 aa4.17□□□□□ -1.74
CALCOCO1-201ENST00000262059 KRTAP4-1Q9BYQ7 146 aa4.17□□□□□ -1.74
CALCOCO1-201ENST00000262059 SACSQ9NZJ4 4579 aa4.14□□□□□ -1.75
CALCOCO1-201ENST00000262059 PRKDCP78527 4128 aaKnown RBP4.14□□□□□ -1.75
CALCOCO1-201ENST00000262059 DYNC1H1Q14204 4646 aaKnown RBP4.13□□□□□ -1.75
CALCOCO1-201ENST00000262059 LRP1BQ9NZR2 4599 aa4.12□□□□□ -1.75
CALCOCO1-201ENST00000262059 STARD9Q9P2P6 4700 aa4.12□□□□□ -1.75
CALCOCO1-201ENST00000262059 MT1HP80294 61 aa4.12□□□□□ -1.75
CALCOCO1-201ENST00000262059 KRTAP10-7P60409 375 aaPredicted RBP4.11□□□□□ -1.75
CALCOCO1-201ENST00000262059 FAT1Q14517 4588 aa4.1□□□□□ -1.75
CALCOCO1-201ENST00000262059 SPRR2GQ9BYE4 73 aa4.1□□□□□ -1.75
CALCOCO1-201ENST00000262059 LCE3CQ5T5A8 94 aa4.09□□□□□ -1.75
CALCOCO1-201ENST00000262059 FAT2Q9NYQ8 4349 aa4.08□□□□□ -1.76
CALCOCO1-201ENST00000262059 MT2AP02795 61 aa4.07□□□□□ -1.76
CALCOCO1-201ENST00000262059 KRTAP19-5Q3LI72 72 aa4.07□□□□□ -1.76
CALCOCO1-201ENST00000262059 DNAH7Q8WXX0 4024 aa4.04□□□□□ -1.76
CALCOCO1-201ENST00000262059 APOBP04114 4563 aaKnown RBP4.01□□□□□ -1.77
CALCOCO1-201ENST00000262059 VPS13BQ7Z7G8 4022 aa4□□□□□ -1.77
CALCOCO1-201ENST00000262059 FRAS1Q86XX4 4008 aa4□□□□□ -1.77
CALCOCO1-201ENST00000262059 SPRR2EP22531 72 aa4□□□□□ -1.77
CALCOCO1-201ENST00000262059 SPRR2BP35325 72 aa4□□□□□ -1.77
CALCOCO1-201ENST00000262059 SPRR2AP35326 72 aa4□□□□□ -1.77
CALCOCO1-201ENST00000262059 KRTAP19-4Q3LI73 84 aa4□□□□□ -1.77
CALCOCO1-201ENST00000262059 KMT2AQ03164 3969 aa3.99□□□□□ -1.77
CALCOCO1-201ENST00000262059 MT1FP04733 61 aa3.96□□□□□ -1.78
CALCOCO1-201ENST00000262059 KRTAP12-4P60329 112 aa3.94□□□□□ -1.78
CALCOCO1-201ENST00000262059 RYR1P21817 5038 aa3.93□□□□□ -1.78
CALCOCO1-201ENST00000262059 RYR2Q92736 4967 aa3.9□□□□□ -1.78
CALCOCO1-201ENST00000262059 SPRR5A0A1B0GTR4 108 aa3.89□□□□□ -1.79
CALCOCO1-201ENST00000262059 MYCBP2O75592 4640 aa3.88□□□□□ -1.79
CALCOCO1-201ENST00000262059 SPRR2DP22532 72 aa3.88□□□□□ -1.79
CALCOCO1-201ENST00000262059 LYSTQ99698 3801 aa3.87□□□□□ -1.79
CALCOCO1-201ENST00000262059 HECTD4Q9Y4D8 3996 aa3.87□□□□□ -1.79
CALCOCO1-201ENST00000262059 LCE3BQ5TA77 95 aa3.86□□□□□ -1.79
CALCOCO1-201ENST00000262059 BIRC6Q9NR09 4857 aa3.86□□□□□ -1.79
CALCOCO1-201ENST00000262059 KRTAP17-1Q9BYP8 105 aa3.85□□□□□ -1.79
CALCOCO1-201ENST00000262059 FAT3Q8TDW7 4589 aa3.82□□□□□ -1.8
CALCOCO1-201ENST00000262059 RYR3Q15413 4870 aa3.8□□□□□ -1.8
CALCOCO1-201ENST00000262059 LCE2BO14633 110 aa3.79□□□□□ -1.8
CALCOCO1-201ENST00000262059 KRTAP19-1Q8IUB9 90 aa3.79□□□□□ -1.8
CALCOCO1-201ENST00000262059 HSPG2P98160 4391 aa3.77□□□□□ -1.81
CALCOCO1-201ENST00000262059 KRTAP19-8Q3LI54 63 aa3.77□□□□□ -1.81
CALCOCO1-201ENST00000262059 LRP1Q07954 4544 aaKnown RBP3.75□□□□□ -1.81
CALCOCO1-201ENST00000262059 HYDINQ4G0P3 5121 aa3.75□□□□□ -1.81
CALCOCO1-201ENST00000262059 MT1GP13640 62 aa3.72□□□□□ -1.81
CALCOCO1-201ENST00000262059 PKHD1L1Q86WI1 4243 aa3.71□□□□□ -1.82
CALCOCO1-201ENST00000262059 PKD1P98161 4303 aa3.7□□□□□ -1.82
CALCOCO1-201ENST00000262059 MT1XP80297 61 aa3.7□□□□□ -1.82
CALCOCO1-201ENST00000262059 EPPK1P58107 5090 aaKnown RBP3.69□□□□□ -1.82
CALCOCO1-201ENST00000262059 HERC1Q15751 4861 aa3.66□□□□□ -1.82
CALCOCO1-201ENST00000262059 LCE3DQ9BYE3 92 aa3.65□□□□□ -1.83
CALCOCO1-201ENST00000262059 KIAA1109Q2LD37 5005 aa3.65□□□□□ -1.83
CALCOCO1-201ENST00000262059 KRTAP9-2Q9BYQ4 174 aa3.64□□□□□ -1.83
CALCOCO1-201ENST00000262059 MT1BP07438 61 aa3.63□□□□□ -1.83
CALCOCO1-201ENST00000262059 LCE2CQ5TA81 110 aa3.61□□□□□ -1.83
CALCOCO1-201ENST00000262059 PCLOQ9Y6V0 5065 aa3.61□□□□□ -1.83
CALCOCO1-201ENST00000262059 LCE3EQ5T5B0 92 aa3.61□□□□□ -1.83
CALCOCO1-201ENST00000262059 KRTAP9-6A0A140TA67 174 aa3.6□□□□□ -1.83
CALCOCO1-201ENST00000262059 LRP2P98164 4655 aa3.59□□□□□ -1.83
CALCOCO1-201ENST00000262059 LCE2DQ5TA82 110 aaPredicted RBP3.59□□□□□ -1.83
CALCOCO1-201ENST00000262059 HERC2O95714 4834 aa3.59□□□□□ -1.83
CALCOCO1-201ENST00000262059 KRTAP9-8Q9BYQ0 159 aa3.57□□□□□ -1.84
CALCOCO1-201ENST00000262059 KRTAP4-8A0A0G2JLE6 195 aa3.56□□□□□ -1.84
CALCOCO1-201ENST00000262059 KRTAP4-8Q9BYQ9 185 aa3.56□□□□□ -1.84
CALCOCO1-201ENST00000262059 PKHD1P08F94 4074 aa3.56□□□□□ -1.84
CALCOCO1-201ENST00000262059 PRM1P04553 51 aa3.54□□□□□ -1.84
CALCOCO1-201ENST00000262059 MUC17Q685J3 4493 aa3.54□□□□□ -1.84
CALCOCO1-201ENST00000262059 KMT2CQ8NEZ4 4911 aaKnown RBP3.53□□□□□ -1.84
CALCOCO1-201ENST00000262059 TNXBP22105 4242 aa3.53□□□□□ -1.84
CALCOCO1-201ENST00000262059 KRTAP4-7Q9BYR0 210 aa3.53□□□□□ -1.84
CALCOCO1-201ENST00000262059 LPAP08519 4548 aa3.51□□□□□ -1.85
CALCOCO1-201ENST00000262059 SYNE1Q8NF91 8797 aaKnown RBP3.49□□□□□ -1.85
CALCOCO1-201ENST00000262059 KRTAP9-3Q9BYQ3 159 aa3.47□□□□□ -1.85
CALCOCO1-201ENST00000262059 MT4P47944 62 aa3.44□□□□□ -1.86
CALCOCO1-201ENST00000262059 KRTAP19-2Q3LHN2 52 aa3.42□□□□□ -1.86
CALCOCO1-201ENST00000262059 KRTAP19-3Q7Z4W3 81 aa3.42□□□□□ -1.86
CALCOCO1-201ENST00000262059 KRTAP20-1Q3LI63 56 aa3.4□□□□□ -1.87
CALCOCO1-201ENST00000262059 MT1LQ93083 61 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms