RNA–Protein interactions for RNA: ENST00000253048.9

ZC3H4-201, Transcript of zinc finger CCCH-type containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZC3H4, Length 6,119 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-201ENST00000253048 DNAH9Q9NYC9 4486 aa6.24□□□□□ -1.41
ZC3H4-201ENST00000253048 KRTAP10-4P60372 401 aaPredicted RBP6.24□□□□□ -1.41
ZC3H4-201ENST00000253048 KRTAP12-3P60328 96 aa6.23□□□□□ -1.41
ZC3H4-201ENST00000253048 KRTAP10-5P60370 271 aa6.21□□□□□ -1.42
ZC3H4-201ENST00000253048 KRTAP3-3Q9BYR6 98 aa6.2□□□□□ -1.42
ZC3H4-201ENST00000253048 PLECQ15149 4684 aaKnown RBP6.19□□□□□ -1.42
ZC3H4-201ENST00000253048 ANK2Q01484 3957 aa6.18□□□□□ -1.42
ZC3H4-201ENST00000253048 KRTAP3-2Q9BYR7 98 aa6.17□□□□□ -1.42
ZC3H4-201ENST00000253048 DNAH1Q9P2D7 4330 aa6.14□□□□□ -1.43
ZC3H4-201ENST00000253048 CMYA5Q8N3K9 4069 aa6.11□□□□□ -1.43
ZC3H4-201ENST00000253048 LCE3AQ5TA76 89 aa6.09□□□□□ -1.43
ZC3H4-201ENST00000253048 DNAH11Q96DT5 4516 aa6.09□□□□□ -1.43
ZC3H4-201ENST00000253048 DNAH5Q8TE73 4624 aa6.07□□□□□ -1.44
ZC3H4-201ENST00000253048 LYSTQ99698 3801 aa6.06□□□□□ -1.44
ZC3H4-201ENST00000253048 DNAH3Q8TD57 4116 aa6□□□□□ -1.45
ZC3H4-201ENST00000253048 MT1HP80294 61 aa5.97□□□□□ -1.45
ZC3H4-201ENST00000253048 STARD9Q9P2P6 4700 aa5.96□□□□□ -1.45
ZC3H4-201ENST00000253048 VPS13DQ5THJ4 4388 aa5.96□□□□□ -1.46
ZC3H4-201ENST00000253048 SPRR2FQ96RM1 72 aa5.96□□□□□ -1.46
ZC3H4-201ENST00000253048 DNHD1Q96M86 4753 aa5.95□□□□□ -1.46
ZC3H4-201ENST00000253048 DNAH17Q9UFH2 4485 aa5.95□□□□□ -1.46
ZC3H4-201ENST00000253048 KRTAP23-1A1A580 65 aa5.91□□□□□ -1.46
ZC3H4-201ENST00000253048 KMT2AQ03164 3969 aa5.91□□□□□ -1.46
ZC3H4-201ENST00000253048 KRTAP10-7P60409 375 aaPredicted RBP5.9□□□□□ -1.46
ZC3H4-201ENST00000253048 DNAH7Q8WXX0 4024 aa5.9□□□□□ -1.47
ZC3H4-201ENST00000253048 FRAS1Q86XX4 4008 aa5.9□□□□□ -1.47
ZC3H4-201ENST00000253048 DNAH8Q96JB1 4490 aa5.88□□□□□ -1.47
ZC3H4-201ENST00000253048 PRKDCP78527 4128 aaKnown RBP5.86□□□□□ -1.47
ZC3H4-201ENST00000253048 FAT1Q14517 4588 aa5.86□□□□□ -1.47
ZC3H4-201ENST00000253048 DNAH2Q9P225 4427 aa5.85□□□□□ -1.47
ZC3H4-201ENST00000253048 LRP1BQ9NZR2 4599 aa5.84□□□□□ -1.47
ZC3H4-201ENST00000253048 DYNC1H1Q14204 4646 aaKnown RBP5.81□□□□□ -1.48
ZC3H4-201ENST00000253048 MT2AP02795 61 aa5.78□□□□□ -1.48
ZC3H4-201ENST00000253048 DYNC2H1Q8NCM8 4307 aaKnown RBP5.77□□□□□ -1.49
ZC3H4-201ENST00000253048 HECTD4Q9Y4D8 3996 aa5.76□□□□□ -1.49
ZC3H4-201ENST00000253048 SPRR2EP22531 72 aa5.75□□□□□ -1.49
ZC3H4-201ENST00000253048 SPRR2BP35325 72 aa5.75□□□□□ -1.49
ZC3H4-201ENST00000253048 SPRR2AP35326 72 aa5.75□□□□□ -1.49
ZC3H4-201ENST00000253048 KRTAP4-1Q9BYQ7 146 aa5.74□□□□□ -1.49
ZC3H4-201ENST00000253048 DNAH6Q9C0G6 4158 aa5.71□□□□□ -1.5
ZC3H4-201ENST00000253048 SACSQ9NZJ4 4579 aa5.67□□□□□ -1.5
ZC3H4-201ENST00000253048 VPS13BQ7Z7G8 4022 aa5.66□□□□□ -1.5
ZC3H4-201ENST00000253048 MT1FP04733 61 aa5.62□□□□□ -1.51
ZC3H4-201ENST00000253048 RYR1P21817 5038 aa5.61□□□□□ -1.51
ZC3H4-201ENST00000253048 FAT2Q9NYQ8 4349 aa5.6□□□□□ -1.51
ZC3H4-201ENST00000253048 MYCBP2O75592 4640 aa5.6□□□□□ -1.51
ZC3H4-201ENST00000253048 SPRR2DP22532 72 aa5.59□□□□□ -1.51
ZC3H4-201ENST00000253048 SPRR2GQ9BYE4 73 aa5.57□□□□□ -1.52
ZC3H4-201ENST00000253048 APOBP04114 4563 aaKnown RBP5.55□□□□□ -1.52
ZC3H4-201ENST00000253048 KRTAP19-5Q3LI72 72 aa5.53□□□□□ -1.52
ZC3H4-201ENST00000253048 HYDINQ4G0P3 5121 aa5.48□□□□□ -1.53
ZC3H4-201ENST00000253048 LRP1Q07954 4544 aaKnown RBP5.45□□□□□ -1.54
ZC3H4-201ENST00000253048 LCE2BO14633 110 aa5.44□□□□□ -1.54
ZC3H4-201ENST00000253048 KIAA1109Q2LD37 5005 aa5.44□□□□□ -1.54
ZC3H4-201ENST00000253048 PKHD1P08F94 4074 aa5.39□□□□□ -1.55
ZC3H4-201ENST00000253048 KRTAP17-1Q9BYP8 105 aa5.39□□□□□ -1.55
ZC3H4-201ENST00000253048 FAT3Q8TDW7 4589 aa5.38□□□□□ -1.55
ZC3H4-201ENST00000253048 PKD1P98161 4303 aa5.36□□□□□ -1.55
ZC3H4-201ENST00000253048 RYR3Q15413 4870 aa5.36□□□□□ -1.55
ZC3H4-201ENST00000253048 LCE3CQ5T5A8 94 aa5.35□□□□□ -1.55
ZC3H4-201ENST00000253048 KRTAP12-4P60329 112 aa5.33□□□□□ -1.56
ZC3H4-201ENST00000253048 KRTAP19-4Q3LI73 84 aa5.32□□□□□ -1.56
ZC3H4-201ENST00000253048 KRTAP19-1Q8IUB9 90 aa5.22□□□□□ -1.57
ZC3H4-201ENST00000253048 RYR2Q92736 4967 aa5.2□□□□□ -1.58
ZC3H4-201ENST00000253048 LRP2P98164 4655 aa5.2□□□□□ -1.58
ZC3H4-201ENST00000253048 LCE3BQ5TA77 95 aa5.18□□□□□ -1.58
ZC3H4-201ENST00000253048 LCE2CQ5TA81 110 aa5.15□□□□□ -1.58
ZC3H4-201ENST00000253048 KRTAP19-8Q3LI54 63 aa5.15□□□□□ -1.59
ZC3H4-201ENST00000253048 HERC1Q15751 4861 aa5.14□□□□□ -1.59
ZC3H4-201ENST00000253048 PKHD1L1Q86WI1 4243 aa5.12□□□□□ -1.59
ZC3H4-201ENST00000253048 HSPG2P98160 4391 aa5.12□□□□□ -1.59
ZC3H4-201ENST00000253048 MT1GP13640 62 aa5.11□□□□□ -1.59
ZC3H4-201ENST00000253048 LCE2DQ5TA82 110 aaPredicted RBP5.1□□□□□ -1.59
ZC3H4-201ENST00000253048 TNXBP22105 4242 aa5.06□□□□□ -1.6
ZC3H4-201ENST00000253048 KMT2CQ8NEZ4 4911 aaKnown RBP5.05□□□□□ -1.6
ZC3H4-201ENST00000253048 LPAP08519 4548 aa5.04□□□□□ -1.6
ZC3H4-201ENST00000253048 HERC2O95714 4834 aa5.04□□□□□ -1.6
ZC3H4-201ENST00000253048 KRTAP9-2Q9BYQ4 174 aa5.02□□□□□ -1.61
ZC3H4-201ENST00000253048 MT1XP80297 61 aa4.99□□□□□ -1.61
ZC3H4-201ENST00000253048 KRTAP9-8Q9BYQ0 159 aa4.96□□□□□ -1.62
ZC3H4-201ENST00000253048 SPRR5A0A1B0GTR4 108 aa4.95□□□□□ -1.62
ZC3H4-201ENST00000253048 MT1BP07438 61 aa4.94□□□□□ -1.62
ZC3H4-201ENST00000253048 KRTAP9-6A0A140TA67 174 aa4.94□□□□□ -1.62
ZC3H4-201ENST00000253048 KRTAP9-3Q9BYQ3 159 aa4.91□□□□□ -1.62
ZC3H4-201ENST00000253048 MT4P47944 62 aa4.91□□□□□ -1.62
ZC3H4-201ENST00000253048 KRTAP4-8A0A0G2JLE6 195 aa4.9□□□□□ -1.63
ZC3H4-201ENST00000253048 KRTAP4-8Q9BYQ9 185 aa4.9□□□□□ -1.63
ZC3H4-201ENST00000253048 LCE3DQ9BYE3 92 aa4.85□□□□□ -1.63
ZC3H4-201ENST00000253048 KRTAP19-3Q7Z4W3 81 aa4.83□□□□□ -1.64
ZC3H4-201ENST00000253048 BIRC6Q9NR09 4857 aa4.81□□□□□ -1.64
ZC3H4-201ENST00000253048 KRTAP20-1Q3LI63 56 aa4.78□□□□□ -1.64
ZC3H4-201ENST00000253048 LCE3EQ5T5B0 92 aa4.77□□□□□ -1.65
ZC3H4-201ENST00000253048 PCLOQ9Y6V0 5065 aa4.77□□□□□ -1.65
ZC3H4-201ENST00000253048 KRTAP19-2Q3LHN2 52 aa4.76□□□□□ -1.65
ZC3H4-201ENST00000253048 EPPK1P58107 5090 aaKnown RBP4.73□□□□□ -1.65
ZC3H4-201ENST00000253048 MUC17Q685J3 4493 aa4.69□□□□□ -1.66
ZC3H4-201ENST00000253048 ABCA13Q86UQ4 5058 aa4.69□□□□□ -1.66
ZC3H4-201ENST00000253048 FLGP20930 4061 aaPredicted RBP4.64□□□□□ -1.67
ZC3H4-201ENST00000253048 KRTAP19-6Q3LI70 58 aa4.64□□□□□ -1.67
ZC3H4-201ENST00000253048 MT3P25713 68 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms