RNA–Protein interactions for RNA: ENST00000251849.8

RAF1-201, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAF1, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-201ENST00000251849 KRTAP10-6P60371 365 aaPredicted RBP7.53□□□□□ -1.2
RAF1-201ENST00000251849 LRP1Q07954 4544 aaKnown RBP7.53□□□□□ -1.2
RAF1-201ENST00000251849 A0A0A0MQY5 61 aa7.52□□□□□ -1.21
RAF1-201ENST00000251849 KRTAP10-8P60410 259 aa7.5□□□□□ -1.21
RAF1-201ENST00000251849 KRTAP12-2P59991 146 aa7.5□□□□□ -1.21
RAF1-201ENST00000251849 HSPG2P98160 4391 aa7.49□□□□□ -1.21
RAF1-201ENST00000251849 S4R3F8 94 aa7.46□□□□□ -1.21
RAF1-201ENST00000251849 APOBP04114 4563 aaKnown RBP7.45□□□□□ -1.22
RAF1-201ENST00000251849 KRTAP3-3Q9BYR6 98 aa7.45□□□□□ -1.22
RAF1-201ENST00000251849 KRTAP3-2Q9BYR7 98 aa7.42□□□□□ -1.22
RAF1-201ENST00000251849 KRTAP15-1Q3LI76 137 aa7.42□□□□□ -1.22
RAF1-201ENST00000251849 SACSQ9NZJ4 4579 aa7.41□□□□□ -1.22
RAF1-201ENST00000251849 FAT3Q8TDW7 4589 aa7.41□□□□□ -1.22
RAF1-201ENST00000251849 KMT2CQ8NEZ4 4911 aaKnown RBP7.34□□□□□ -1.23
RAF1-201ENST00000251849 LPAP08519 4548 aa7.34□□□□□ -1.23
RAF1-201ENST00000251849 RPS29P62273 56 aaKnown RBP7.28□□□□□ -1.24
RAF1-201ENST00000251849 KRTAP12-1P59990 96 aa7.28□□□□□ -1.24
RAF1-201ENST00000251849 PKHD1L1Q86WI1 4243 aa7.25□□□□□ -1.25
RAF1-201ENST00000251849 LUZP6Q538Z0 58 aa7.24□□□□□ -1.25
RAF1-201ENST00000251849 LRP2P98164 4655 aa7.2□□□□□ -1.26
RAF1-201ENST00000251849 XP32Q5T750 250 aa7.19□□□□□ -1.26
RAF1-201ENST00000251849 M0QZ58 72 aa7.17□□□□□ -1.26
RAF1-201ENST00000251849 KRTAP10-4P60372 401 aaPredicted RBP7.14□□□□□ -1.27
RAF1-201ENST00000251849 KIAA1109Q2LD37 5005 aa7.13□□□□□ -1.27
RAF1-201ENST00000251849 Q5VSD8 79 aa7.1□□□□□ -1.27
RAF1-201ENST00000251849 R4GN34 69 aa7.07□□□□□ -1.28
RAF1-201ENST00000251849 KRTAP21-3Q3LHN1 58 aa7.06□□□□□ -1.28
RAF1-201ENST00000251849 A0A1B0GVY2 172 aa7.06□□□□□ -1.28
RAF1-201ENST00000251849 RYR1P21817 5038 aa7.04□□□□□ -1.28
RAF1-201ENST00000251849 KRTAP17-1Q9BYP8 105 aa7.04□□□□□ -1.28
RAF1-201ENST00000251849 PLAC4Q8WY50 150 aa7.02□□□□□ -1.29
RAF1-201ENST00000251849 RYR2Q92736 4967 aa7.01□□□□□ -1.29
RAF1-201ENST00000251849 RYR3Q15413 4870 aa7.01□□□□□ -1.29
RAF1-201ENST00000251849 TNXBP22105 4242 aa6.99□□□□□ -1.29
RAF1-201ENST00000251849 LORP23490 312 aaPredicted RBP6.97□□□□□ -1.29
RAF1-201ENST00000251849 CAMK2N1Q7Z7J9 78 aa6.87□□□□□ -1.31
RAF1-201ENST00000251849 EPPK1P58107 5090 aaKnown RBP6.86□□□□□ -1.31
RAF1-201ENST00000251849 ABCA13Q86UQ4 5058 aa6.84□□□□□ -1.31
RAF1-201ENST00000251849 KRTAP4-5Q9BYR2 181 aa6.83□□□□□ -1.32
RAF1-201ENST00000251849 MUC2Q02817 5179 aa6.82□□□□□ -1.32
RAF1-201ENST00000251849 MT1HL1P0DM35 61 aa6.69□□□□□ -1.34
RAF1-201ENST00000251849 J3QL48 77 aa6.63□□□□□ -1.35
RAF1-201ENST00000251849 KRTAP4-1Q9BYQ7 146 aa6.55□□□□□ -1.36
RAF1-201ENST00000251849 HERC2O95714 4834 aa6.45□□□□□ -1.38
RAF1-201ENST00000251849 FAT4Q6V0I7 4981 aa6.43□□□□□ -1.38
RAF1-201ENST00000251849 PP632Q6XCG6 107 aa6.41□□□□□ -1.38
RAF1-201ENST00000251849 TNP1P09430 55 aa6.41□□□□□ -1.38
RAF1-201ENST00000251849 MUC17Q685J3 4493 aa6.41□□□□□ -1.38
RAF1-201ENST00000251849 SEC61BP60468 96 aaKnown RBP6.4□□□□□ -1.39
RAF1-201ENST00000251849 HERC1Q15751 4861 aa6.37□□□□□ -1.39
RAF1-201ENST00000251849 RNF213Q63HN8 5207 aa6.34□□□□□ -1.39
RAF1-201ENST00000251849 PCLOQ9Y6V0 5065 aa6.33□□□□□ -1.4
RAF1-201ENST00000251849 M0R2T5 61 aa6.15□□□□□ -1.42
RAF1-201ENST00000251849 HMCN2Q8NDA2 5059 aa6.15□□□□□ -1.43
RAF1-201ENST00000251849 LCE3AQ5TA76 89 aa6.13□□□□□ -1.43
RAF1-201ENST00000251849 UBR4Q5T4S7 5183 aa6.12□□□□□ -1.43
RAF1-201ENST00000251849 KRTAP19-2Q3LHN2 52 aa6.11□□□□□ -1.43
RAF1-201ENST00000251849 FLGP20930 4061 aaPredicted RBP6.09□□□□□ -1.44
RAF1-201ENST00000251849 PRO2289Q9P1D8 64 aa6.04□□□□□ -1.44
RAF1-201ENST00000251849 SPRR5A0A1B0GTR4 108 aa6.04□□□□□ -1.44
RAF1-201ENST00000251849 BIRC6Q9NR09 4857 aa5.94□□□□□ -1.46
RAF1-201ENST00000251849 KRTAP10-10P60014 251 aa5.91□□□□□ -1.46
RAF1-201ENST00000251849 KRTAP19-1Q8IUB9 90 aa5.87□□□□□ -1.47
RAF1-201ENST00000251849 KMT2DO14686 5537 aa5.85□□□□□ -1.47
RAF1-201ENST00000251849 KRTAP23-1A1A580 65 aa5.79□□□□□ -1.48
RAF1-201ENST00000251849 USH2AO75445 5202 aa5.76□□□□□ -1.49
RAF1-201ENST00000251849 KRTAP12-3P60328 96 aa5.74□□□□□ -1.49
RAF1-201ENST00000251849 INE1O15225 51 aa5.73□□□□□ -1.49
RAF1-201ENST00000251849 SPRR2GQ9BYE4 73 aa5.73□□□□□ -1.49
RAF1-201ENST00000251849 MT1FP04733 61 aa5.73□□□□□ -1.49
RAF1-201ENST00000251849 LCE2CQ5TA81 110 aa5.69□□□□□ -1.5
RAF1-201ENST00000251849 FSIP2Q5CZC0 6907 aa5.68□□□□□ -1.5
RAF1-201ENST00000251849 KRTAP10-12P60413 245 aa5.66□□□□□ -1.5
RAF1-201ENST00000251849 MT2AP02795 61 aa5.64□□□□□ -1.51
RAF1-201ENST00000251849 KRTAP10-7P60409 375 aaPredicted RBP5.64□□□□□ -1.51
RAF1-201ENST00000251849 KRTAP8-1Q8IUC2 63 aa5.63□□□□□ -1.51
RAF1-201ENST00000251849 MT1HP80294 61 aa5.63□□□□□ -1.51
RAF1-201ENST00000251849 KRTAP10-5P60370 271 aa5.58□□□□□ -1.52
RAF1-201ENST00000251849 MT1XP80297 61 aa5.57□□□□□ -1.52
RAF1-201ENST00000251849 MT1BP07438 61 aa5.49□□□□□ -1.53
RAF1-201ENST00000251849 KRTAP9-8Q9BYQ0 159 aa5.46□□□□□ -1.53
RAF1-201ENST00000251849 KRTAP19-5Q3LI72 72 aa5.44□□□□□ -1.54
RAF1-201ENST00000251849 KRTAP4-7Q9BYR0 210 aa5.41□□□□□ -1.54
RAF1-201ENST00000251849 KRTAP4-8A0A0G2JLE6 195 aa5.38□□□□□ -1.55
RAF1-201ENST00000251849 KRTAP4-8Q9BYQ9 185 aa5.38□□□□□ -1.55
RAF1-201ENST00000251849 KRTAP9-6A8MVA2 160 aa5.33□□□□□ -1.56
RAF1-201ENST00000251849 KRTAP19-8Q3LI54 63 aa5.33□□□□□ -1.56
RAF1-201ENST00000251849 LCE3CQ5T5A8 94 aa5.33□□□□□ -1.56
RAF1-201ENST00000251849 DSTQ03001 7570 aaKnown RBP5.26□□□□□ -1.57
RAF1-201ENST00000251849 OBSCNQ5VST9 7968 aa5.21□□□□□ -1.58
RAF1-201ENST00000251849 KRTAP9-3Q9BYQ3 159 aa5.18□□□□□ -1.58
RAF1-201ENST00000251849 CRCT1Q9UGL9 99 aa5.16□□□□□ -1.58
RAF1-201ENST00000251849 FCGBPQ9Y6R7 5405 aaPredicted RBP5.16□□□□□ -1.58
RAF1-201ENST00000251849 SYNE1Q8NF91 8797 aaKnown RBP5.14□□□□□ -1.59
RAF1-201ENST00000251849 LCE2BO14633 110 aa5.14□□□□□ -1.59
RAF1-201ENST00000251849 LOC100996750A0A140TA64 210 aa5.01□□□□□ -1.61
RAF1-201ENST00000251849 MUC12Q9UKN1 5478 aa5.01□□□□□ -1.61
RAF1-201ENST00000251849 KRTAP4-3Q9BYR4 195 aa4.97□□□□□ -1.61
RAF1-201ENST00000251849 KRTAP2-3P0C7H8 128 aa4.94□□□□□ -1.62
RAF1-201ENST00000251849 KRTAP2-4Q9BYR9 128 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms