RNA–Protein interactions for RNA: ENST00000247225.6

SGPP1-201, Transcript of sphingosine-1-phosphate phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGPP1, Length 3,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGPP1-201ENST00000247225 KRTAP10-8P60410 259 aa8.73□□□□□ -1.01
SGPP1-201ENST00000247225 RPL37P61927 97 aaKnown RBP8.73□□□□□ -1.01
SGPP1-201ENST00000247225 P0C880 135 aa8.7□□□□□ -1.02
SGPP1-201ENST00000247225 S4R3F8 94 aa8.68□□□□□ -1.02
SGPP1-201ENST00000247225 HSPG2P98160 4391 aa8.67□□□□□ -1.02
SGPP1-201ENST00000247225 FAT3Q8TDW7 4589 aa8.66□□□□□ -1.02
SGPP1-201ENST00000247225 KRTAP10-6P60371 365 aaPredicted RBP8.64□□□□□ -1.03
SGPP1-201ENST00000247225 KRTAP10-4P60372 401 aaPredicted RBP8.64□□□□□ -1.03
SGPP1-201ENST00000247225 KRTAP3-3Q9BYR6 98 aa8.6□□□□□ -1.03
SGPP1-201ENST00000247225 Q5VSD8 79 aa8.59□□□□□ -1.03
SGPP1-201ENST00000247225 KMT2CQ8NEZ4 4911 aaKnown RBP8.59□□□□□ -1.03
SGPP1-201ENST00000247225 TPRXLQ17RH7 258 aa8.57□□□□□ -1.04
SGPP1-201ENST00000247225 A0A1B0GVY2 172 aa8.56□□□□□ -1.04
SGPP1-201ENST00000247225 XP32Q5T750 250 aa8.56□□□□□ -1.04
SGPP1-201ENST00000247225 PKHD1L1Q86WI1 4243 aa8.53□□□□□ -1.04
SGPP1-201ENST00000247225 KRTAP3-2Q9BYR7 98 aa8.52□□□□□ -1.05
SGPP1-201ENST00000247225 KRTAP12-2P59991 146 aa8.51□□□□□ -1.05
SGPP1-201ENST00000247225 LPAP08519 4548 aa8.48□□□□□ -1.05
SGPP1-201ENST00000247225 LRP2P98164 4655 aa8.43□□□□□ -1.06
SGPP1-201ENST00000247225 KIAA1109Q2LD37 5005 aa8.42□□□□□ -1.06
SGPP1-201ENST00000247225 KRTAP21-3Q3LHN1 58 aa8.42□□□□□ -1.06
SGPP1-201ENST00000247225 NDUFAF8A1L188 74 aa8.41□□□□□ -1.06
SGPP1-201ENST00000247225 RYR2Q92736 4967 aa8.36□□□□□ -1.07
SGPP1-201ENST00000247225 RYR1P21817 5038 aa8.34□□□□□ -1.08
SGPP1-201ENST00000247225 TNXBP22105 4242 aa8.32□□□□□ -1.08
SGPP1-201ENST00000247225 KRTAP17-1Q9BYP8 105 aa8.31□□□□□ -1.08
SGPP1-201ENST00000247225 M0QZ58 72 aa8.31□□□□□ -1.08
SGPP1-201ENST00000247225 KRTAP12-1P59990 96 aa8.31□□□□□ -1.08
SGPP1-201ENST00000247225 RYR3Q15413 4870 aa8.3□□□□□ -1.08
SGPP1-201ENST00000247225 R4GN34 69 aa8.24□□□□□ -1.09
SGPP1-201ENST00000247225 MT1HL1P0DM35 61 aa8.14□□□□□ -1.11
SGPP1-201ENST00000247225 ABCA13Q86UQ4 5058 aa8.1□□□□□ -1.11
SGPP1-201ENST00000247225 KRTAP15-1Q3LI76 137 aa8.07□□□□□ -1.12
SGPP1-201ENST00000247225 LORP23490 312 aaPredicted RBP8.05□□□□□ -1.12
SGPP1-201ENST00000247225 KRTAP4-5Q9BYR2 181 aa8□□□□□ -1.13
SGPP1-201ENST00000247225 CAMK2N1Q7Z7J9 78 aa7.98□□□□□ -1.13
SGPP1-201ENST00000247225 MUC2Q02817 5179 aa7.98□□□□□ -1.13
SGPP1-201ENST00000247225 EPPK1P58107 5090 aaKnown RBP7.96□□□□□ -1.13
SGPP1-201ENST00000247225 J3QL48 77 aa7.91□□□□□ -1.14
SGPP1-201ENST00000247225 PLAC4Q8WY50 150 aa7.86□□□□□ -1.15
SGPP1-201ENST00000247225 SEC61BP60468 96 aaKnown RBP7.83□□□□□ -1.16
SGPP1-201ENST00000247225 KRTAP4-1Q9BYQ7 146 aa7.81□□□□□ -1.16
SGPP1-201ENST00000247225 LUZP6Q538Z0 58 aa7.68□□□□□ -1.18
SGPP1-201ENST00000247225 HERC2O95714 4834 aa7.62□□□□□ -1.19
SGPP1-201ENST00000247225 FAT4Q6V0I7 4981 aa7.56□□□□□ -1.2
SGPP1-201ENST00000247225 MUC17Q685J3 4493 aa7.55□□□□□ -1.2
SGPP1-201ENST00000247225 M0R2T5 61 aa7.46□□□□□ -1.21
SGPP1-201ENST00000247225 TNP1P09430 55 aa7.45□□□□□ -1.22
SGPP1-201ENST00000247225 HERC1Q15751 4861 aa7.42□□□□□ -1.22
SGPP1-201ENST00000247225 PP632Q6XCG6 107 aa7.39□□□□□ -1.23
SGPP1-201ENST00000247225 PCLOQ9Y6V0 5065 aa7.38□□□□□ -1.23
SGPP1-201ENST00000247225 RNF213Q63HN8 5207 aa7.38□□□□□ -1.23
SGPP1-201ENST00000247225 A0A0A0MQY5 61 aa7.33□□□□□ -1.24
SGPP1-201ENST00000247225 KRTAP19-2Q3LHN2 52 aa7.3□□□□□ -1.24
SGPP1-201ENST00000247225 FLGP20930 4061 aaPredicted RBP7.25□□□□□ -1.25
SGPP1-201ENST00000247225 KRTAP10-10P60014 251 aa7.13□□□□□ -1.27
SGPP1-201ENST00000247225 HMCN2Q8NDA2 5059 aa7.12□□□□□ -1.27
SGPP1-201ENST00000247225 BIRC6Q9NR09 4857 aa7.12□□□□□ -1.27
SGPP1-201ENST00000247225 UBR4Q5T4S7 5183 aa7.08□□□□□ -1.28
SGPP1-201ENST00000247225 LCE3AQ5TA76 89 aa7.06□□□□□ -1.28
SGPP1-201ENST00000247225 KRTAP19-1Q8IUB9 90 aa6.97□□□□□ -1.29
SGPP1-201ENST00000247225 LCE2CQ5TA81 110 aa6.92□□□□□ -1.3
SGPP1-201ENST00000247225 MT1FP04733 61 aa6.87□□□□□ -1.31
SGPP1-201ENST00000247225 SPRR2GQ9BYE4 73 aa6.85□□□□□ -1.31
SGPP1-201ENST00000247225 MT1HP80294 61 aa6.83□□□□□ -1.32
SGPP1-201ENST00000247225 MT2AP02795 61 aa6.8□□□□□ -1.32
SGPP1-201ENST00000247225 SPRR5A0A1B0GTR4 108 aa6.78□□□□□ -1.32
SGPP1-201ENST00000247225 KRTAP23-1A1A580 65 aa6.76□□□□□ -1.33
SGPP1-201ENST00000247225 USH2AO75445 5202 aa6.74□□□□□ -1.33
SGPP1-201ENST00000247225 KMT2DO14686 5537 aa6.71□□□□□ -1.33
SGPP1-201ENST00000247225 KRTAP12-3P60328 96 aa6.66□□□□□ -1.34
SGPP1-201ENST00000247225 KRTAP10-12P60413 245 aa6.65□□□□□ -1.35
SGPP1-201ENST00000247225 KRTAP9-8Q9BYQ0 159 aa6.63□□□□□ -1.35
SGPP1-201ENST00000247225 KRTAP10-7P60409 375 aaPredicted RBP6.6□□□□□ -1.35
SGPP1-201ENST00000247225 KRTAP10-5P60370 271 aa6.59□□□□□ -1.35
SGPP1-201ENST00000247225 MT1XP80297 61 aa6.58□□□□□ -1.36
SGPP1-201ENST00000247225 MT1BP07438 61 aa6.56□□□□□ -1.36
SGPP1-201ENST00000247225 KRTAP8-1Q8IUC2 63 aa6.55□□□□□ -1.36
SGPP1-201ENST00000247225 FSIP2Q5CZC0 6907 aa6.45□□□□□ -1.38
SGPP1-201ENST00000247225 KRTAP19-8Q3LI54 63 aa6.43□□□□□ -1.38
SGPP1-201ENST00000247225 PRO2289Q9P1D8 64 aa6.39□□□□□ -1.39
SGPP1-201ENST00000247225 KRTAP19-5Q3LI72 72 aa6.36□□□□□ -1.39
SGPP1-201ENST00000247225 KRTAP4-8A0A0G2JLE6 195 aa6.33□□□□□ -1.4
SGPP1-201ENST00000247225 KRTAP4-8Q9BYQ9 185 aa6.33□□□□□ -1.4
SGPP1-201ENST00000247225 KRTAP9-3Q9BYQ3 159 aa6.31□□□□□ -1.4
SGPP1-201ENST00000247225 INE1O15225 51 aa6.24□□□□□ -1.41
SGPP1-201ENST00000247225 KRTAP4-7Q9BYR0 210 aa6.22□□□□□ -1.41
SGPP1-201ENST00000247225 LCE2BO14633 110 aa6.19□□□□□ -1.42
SGPP1-201ENST00000247225 LCE3CQ5T5A8 94 aa6.18□□□□□ -1.42
SGPP1-201ENST00000247225 KRTAP9-6A8MVA2 160 aa6.06□□□□□ -1.44
SGPP1-201ENST00000247225 DSTQ03001 7570 aaKnown RBP6.06□□□□□ -1.44
SGPP1-201ENST00000247225 CRCT1Q9UGL9 99 aa5.97□□□□□ -1.45
SGPP1-201ENST00000247225 FCGBPQ9Y6R7 5405 aaPredicted RBP5.92□□□□□ -1.46
SGPP1-201ENST00000247225 MUC12Q9UKN1 5478 aa5.85□□□□□ -1.47
SGPP1-201ENST00000247225 SYNE1Q8NF91 8797 aaKnown RBP5.84□□□□□ -1.47
SGPP1-201ENST00000247225 KRTAP19-7Q3SYF9 63 aa5.84□□□□□ -1.48
SGPP1-201ENST00000247225 OBSCNQ5VST9 7968 aa5.82□□□□□ -1.48
SGPP1-201ENST00000247225 LOC100996750A0A140TA64 210 aa5.77□□□□□ -1.49
SGPP1-201ENST00000247225 KRTAP4-3Q9BYR4 195 aa5.77□□□□□ -1.49
SGPP1-201ENST00000247225 SSPOA2VEC9 5147 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms