RNA–Protein interactions for RNA: ENST00000245441.9

NIN-201, Transcript of ninein, humanhuman

APPRIS P5 TSL 5 BASIC

Gene NIN, Length 10,293 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-201ENST00000245441 KRTAP12-3P60328 96 aa5□□□□□ -1.61
NIN-201ENST00000245441 ANK2Q01484 3957 aa4.91□□□□□ -1.62
NIN-201ENST00000245441 HECTD4Q9Y4D8 3996 aa4.9□□□□□ -1.63
NIN-201ENST00000245441 DNAH2Q9P225 4427 aa4.89□□□□□ -1.63
NIN-201ENST00000245441 DNAH3Q8TD57 4116 aa4.88□□□□□ -1.63
NIN-201ENST00000245441 KMT2AQ03164 3969 aa4.87□□□□□ -1.63
NIN-201ENST00000245441 CMYA5Q8N3K9 4069 aa4.87□□□□□ -1.63
NIN-201ENST00000245441 LCE3AQ5TA76 89 aa4.86□□□□□ -1.63
NIN-201ENST00000245441 CRCT1Q9UGL9 99 aa4.86□□□□□ -1.63
NIN-201ENST00000245441 VPS13BQ7Z7G8 4022 aa4.85□□□□□ -1.63
NIN-201ENST00000245441 KRTAP4-5Q9BYR2 181 aa4.83□□□□□ -1.64
NIN-201ENST00000245441 DNAH1Q9P2D7 4330 aa4.83□□□□□ -1.64
NIN-201ENST00000245441 DNAH7Q8WXX0 4024 aa4.82□□□□□ -1.64
NIN-201ENST00000245441 LORP23490 312 aaPredicted RBP4.76□□□□□ -1.65
NIN-201ENST00000245441 FRAS1Q86XX4 4008 aa4.73□□□□□ -1.65
NIN-201ENST00000245441 PRKDCP78527 4128 aaKnown RBP4.69□□□□□ -1.66
NIN-201ENST00000245441 DNAH9Q9NYC9 4486 aa4.67□□□□□ -1.66
NIN-201ENST00000245441 KRTAP8-1Q8IUC2 63 aa4.64□□□□□ -1.67
NIN-201ENST00000245441 KRTAP10-5P60370 271 aa4.62□□□□□ -1.67
NIN-201ENST00000245441 DNAH10Q8IVF4 4471 aa4.61□□□□□ -1.67
NIN-201ENST00000245441 SPRR2GQ9BYE4 73 aa4.56□□□□□ -1.68
NIN-201ENST00000245441 FAT2Q9NYQ8 4349 aa4.52□□□□□ -1.69
NIN-201ENST00000245441 DNAH5Q8TE73 4624 aa4.52□□□□□ -1.69
NIN-201ENST00000245441 DNAH6Q9C0G6 4158 aa4.51□□□□□ -1.69
NIN-201ENST00000245441 PLECQ15149 4684 aaKnown RBP4.51□□□□□ -1.69
NIN-201ENST00000245441 DNAH11Q96DT5 4516 aa4.5□□□□□ -1.69
NIN-201ENST00000245441 STARD9Q9P2P6 4700 aa4.5□□□□□ -1.69
NIN-201ENST00000245441 KRTAP4-1Q9BYQ7 146 aa4.49□□□□□ -1.69
NIN-201ENST00000245441 DNAH8Q96JB1 4490 aa4.48□□□□□ -1.69
NIN-201ENST00000245441 MT1HP80294 61 aa4.48□□□□□ -1.69
NIN-201ENST00000245441 DYNC2H1Q8NCM8 4307 aaKnown RBP4.47□□□□□ -1.69
NIN-201ENST00000245441 VPS13DQ5THJ4 4388 aa4.46□□□□□ -1.7
NIN-201ENST00000245441 MT2AP02795 61 aa4.42□□□□□ -1.7
NIN-201ENST00000245441 KRTAP19-4Q3LI73 84 aa4.39□□□□□ -1.71
NIN-201ENST00000245441 LCE3CQ5T5A8 94 aa4.38□□□□□ -1.71
NIN-201ENST00000245441 KRTAP19-5Q3LI72 72 aa4.36□□□□□ -1.71
NIN-201ENST00000245441 KRTAP10-7P60409 375 aaPredicted RBP4.33□□□□□ -1.72
NIN-201ENST00000245441 DNAH17Q9UFH2 4485 aa4.33□□□□□ -1.72
NIN-201ENST00000245441 MT1FP04733 61 aa4.33□□□□□ -1.72
NIN-201ENST00000245441 LRP1BQ9NZR2 4599 aa4.29□□□□□ -1.72
NIN-201ENST00000245441 SPRR2FQ96RM1 72 aa4.27□□□□□ -1.73
NIN-201ENST00000245441 PKHD1P08F94 4074 aa4.26□□□□□ -1.73
NIN-201ENST00000245441 FLGP20930 4061 aaPredicted RBP4.25□□□□□ -1.73
NIN-201ENST00000245441 FAT1Q14517 4588 aa4.18□□□□□ -1.74
NIN-201ENST00000245441 MYCBP2O75592 4640 aa4.16□□□□□ -1.74
NIN-201ENST00000245441 DNHD1Q96M86 4753 aa4.16□□□□□ -1.74
NIN-201ENST00000245441 SACSQ9NZJ4 4579 aa4.15□□□□□ -1.75
NIN-201ENST00000245441 KRTAP19-8Q3LI54 63 aa4.15□□□□□ -1.75
NIN-201ENST00000245441 KRTAP19-1Q8IUB9 90 aa4.14□□□□□ -1.75
NIN-201ENST00000245441 APOBP04114 4563 aaKnown RBP4.1□□□□□ -1.75
NIN-201ENST00000245441 FAT3Q8TDW7 4589 aa4.08□□□□□ -1.76
NIN-201ENST00000245441 DYNC1H1Q14204 4646 aaKnown RBP4.07□□□□□ -1.76
NIN-201ENST00000245441 MT1XP80297 61 aa4.07□□□□□ -1.76
NIN-201ENST00000245441 RYR1P21817 5038 aa4.05□□□□□ -1.76
NIN-201ENST00000245441 PKHD1L1Q86WI1 4243 aa4.05□□□□□ -1.76
NIN-201ENST00000245441 LRP1Q07954 4544 aaKnown RBP4.05□□□□□ -1.76
NIN-201ENST00000245441 LCE3BQ5TA77 95 aa4.01□□□□□ -1.77
NIN-201ENST00000245441 SPRR5A0A1B0GTR4 108 aa4.01□□□□□ -1.77
NIN-201ENST00000245441 KRTAP12-4P60329 112 aa3.99□□□□□ -1.77
NIN-201ENST00000245441 PKD1P98161 4303 aa3.96□□□□□ -1.78
NIN-201ENST00000245441 SPRR2EP22531 72 aa3.94□□□□□ -1.78
NIN-201ENST00000245441 SPRR2BP35325 72 aa3.94□□□□□ -1.78
NIN-201ENST00000245441 SPRR2AP35326 72 aa3.94□□□□□ -1.78
NIN-201ENST00000245441 MT1BP07438 61 aa3.93□□□□□ -1.78
NIN-201ENST00000245441 KRTAP9-8Q9BYQ0 159 aa3.93□□□□□ -1.78
NIN-201ENST00000245441 MT1GP13640 62 aa3.91□□□□□ -1.78
NIN-201ENST00000245441 LCE2BO14633 110 aa3.88□□□□□ -1.79
NIN-201ENST00000245441 TNXBP22105 4242 aa3.87□□□□□ -1.79
NIN-201ENST00000245441 LRP2P98164 4655 aa3.86□□□□□ -1.79
NIN-201ENST00000245441 RYR3Q15413 4870 aa3.85□□□□□ -1.79
NIN-201ENST00000245441 KRTAP17-1Q9BYP8 105 aa3.85□□□□□ -1.79
NIN-201ENST00000245441 SPRR2DP22532 72 aa3.83□□□□□ -1.8
NIN-201ENST00000245441 LCE3DQ9BYE3 92 aa3.83□□□□□ -1.8
NIN-201ENST00000245441 KRTAP9-3Q9BYQ3 159 aa3.83□□□□□ -1.8
NIN-201ENST00000245441 HSPG2P98160 4391 aa3.82□□□□□ -1.8
NIN-201ENST00000245441 KRTAP4-8A0A0G2JLE6 195 aa3.81□□□□□ -1.8
NIN-201ENST00000245441 KRTAP4-8Q9BYQ9 185 aa3.81□□□□□ -1.8
NIN-201ENST00000245441 LCE2CQ5TA81 110 aa3.79□□□□□ -1.8
NIN-201ENST00000245441 LCE3EQ5T5B0 92 aa3.76□□□□□ -1.81
NIN-201ENST00000245441 MT1LQ93083 61 aa3.74□□□□□ -1.81
NIN-201ENST00000245441 KRTAP19-3Q7Z4W3 81 aa3.73□□□□□ -1.81
NIN-201ENST00000245441 LPAP08519 4548 aa3.67□□□□□ -1.82
NIN-201ENST00000245441 MT1EP04732 61 aa3.66□□□□□ -1.82
NIN-201ENST00000245441 PCLOQ9Y6V0 5065 aa3.65□□□□□ -1.82
NIN-201ENST00000245441 KRTAP19-2Q3LHN2 52 aa3.61□□□□□ -1.83
NIN-201ENST00000245441 KIAA1109Q2LD37 5005 aa3.61□□□□□ -1.83
NIN-201ENST00000245441 KRTAP4-7Q9BYR0 210 aa3.59□□□□□ -1.83
NIN-201ENST00000245441 RYR2Q92736 4967 aa3.56□□□□□ -1.84
NIN-201ENST00000245441 KMT2CQ8NEZ4 4911 aaKnown RBP3.56□□□□□ -1.84
NIN-201ENST00000245441 MT1MQ8N339 61 aa3.55□□□□□ -1.84
NIN-201ENST00000245441 MT3P25713 68 aa3.51□□□□□ -1.85
NIN-201ENST00000245441 HYDINQ4G0P3 5121 aa3.51□□□□□ -1.85
NIN-201ENST00000245441 LCE2DQ5TA82 110 aaPredicted RBP3.49□□□□□ -1.85
NIN-201ENST00000245441 PRM1P04553 51 aa3.48□□□□□ -1.85
NIN-201ENST00000245441 HERC2O95714 4834 aa3.46□□□□□ -1.85
NIN-201ENST00000245441 MUC17Q685J3 4493 aa3.46□□□□□ -1.86
NIN-201ENST00000245441 KRTAP19-6Q3LI70 58 aa3.46□□□□□ -1.86
NIN-201ENST00000245441 LOC100996750A0A140TA64 210 aa3.42□□□□□ -1.86
NIN-201ENST00000245441 MT4P47944 62 aa3.38□□□□□ -1.87
NIN-201ENST00000245441 KRTAP19-7Q3SYF9 63 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms