RNA–Protein interactions for RNA: ENST00000235372.11

PRDM2-201, Transcript of PR/SET domain 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRDM2, Length 7,957 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-201ENST00000235372 ALMS1Q8TCU4 4167 aa3.33□□□□□ -1.88
PRDM2-201ENST00000235372 KMT2AQ03164 3969 aa3.33□□□□□ -1.88
PRDM2-201ENST00000235372 KRTAP8-1Q8IUC2 63 aa3.31□□□□□ -1.88
PRDM2-201ENST00000235372 DNAH3Q8TD57 4116 aa3.29□□□□□ -1.88
PRDM2-201ENST00000235372 KRTAP23-1A1A580 65 aa3.27□□□□□ -1.89
PRDM2-201ENST00000235372 LCE3AQ5TA76 89 aa3.26□□□□□ -1.89
PRDM2-201ENST00000235372 HECTD4Q9Y4D8 3996 aa3.25□□□□□ -1.89
PRDM2-201ENST00000235372 VPS13BQ7Z7G8 4022 aa3.24□□□□□ -1.89
PRDM2-201ENST00000235372 LORP23490 312 aaPredicted RBP3.24□□□□□ -1.89
PRDM2-201ENST00000235372 DNAH1Q9P2D7 4330 aa3.24□□□□□ -1.89
PRDM2-201ENST00000235372 HUWE1Q7Z6Z7 4374 aaKnown RBP3.19□□□□□ -1.9
PRDM2-201ENST00000235372 PRKDCP78527 4128 aaKnown RBP3.18□□□□□ -1.9
PRDM2-201ENST00000235372 DNAH6Q9C0G6 4158 aa3.17□□□□□ -1.9
PRDM2-201ENST00000235372 DNAH2Q9P225 4427 aa3.17□□□□□ -1.9
PRDM2-201ENST00000235372 KRTAP10-7P60409 375 aaPredicted RBP3.15□□□□□ -1.9
PRDM2-201ENST00000235372 FLGP20930 4061 aaPredicted RBP3.14□□□□□ -1.91
PRDM2-201ENST00000235372 DNAH10Q8IVF4 4471 aa3.12□□□□□ -1.91
PRDM2-201ENST00000235372 MT1HL1P0DM35 61 aa3.12□□□□□ -1.91
PRDM2-201ENST00000235372 KRTAP3-2Q9BYR7 98 aa3.12□□□□□ -1.91
PRDM2-201ENST00000235372 KRTAP3-3Q9BYR6 98 aa3.11□□□□□ -1.91
PRDM2-201ENST00000235372 SPRR2FQ96RM1 72 aa3.03□□□□□ -1.92
PRDM2-201ENST00000235372 DNAH9Q9NYC9 4486 aa3.01□□□□□ -1.93
PRDM2-201ENST00000235372 KRTAP4-5Q9BYR2 181 aa3□□□□□ -1.93
PRDM2-201ENST00000235372 KRTAP10-4P60372 401 aaPredicted RBP2.97□□□□□ -1.93
PRDM2-201ENST00000235372 DYNC2H1Q8NCM8 4307 aaKnown RBP2.95□□□□□ -1.94
PRDM2-201ENST00000235372 FAT2Q9NYQ8 4349 aa2.93□□□□□ -1.94
PRDM2-201ENST00000235372 VPS13DQ5THJ4 4388 aa2.91□□□□□ -1.94
PRDM2-201ENST00000235372 SPRR2EP22531 72 aa2.9□□□□□ -1.94
PRDM2-201ENST00000235372 SPRR2BP35325 72 aa2.9□□□□□ -1.94
PRDM2-201ENST00000235372 SPRR2AP35326 72 aa2.9□□□□□ -1.94
PRDM2-201ENST00000235372 LCE3CQ5T5A8 94 aa2.89□□□□□ -1.95
PRDM2-201ENST00000235372 PKHD1P08F94 4074 aa2.89□□□□□ -1.95
PRDM2-201ENST00000235372 KRTAP19-5Q3LI72 72 aa2.88□□□□□ -1.95
PRDM2-201ENST00000235372 KRTAP19-4Q3LI73 84 aa2.87□□□□□ -1.95
PRDM2-201ENST00000235372 STARD9Q9P2P6 4700 aa2.86□□□□□ -1.95
PRDM2-201ENST00000235372 MT1HP80294 61 aa2.85□□□□□ -1.95
PRDM2-201ENST00000235372 LCE3BQ5TA77 95 aa2.85□□□□□ -1.95
PRDM2-201ENST00000235372 KRTAP12-4P60329 112 aa2.83□□□□□ -1.96
PRDM2-201ENST00000235372 SPRR2DP22532 72 aa2.83□□□□□ -1.96
PRDM2-201ENST00000235372 RYR1P21817 5038 aa2.82□□□□□ -1.96
PRDM2-201ENST00000235372 SPRR2GQ9BYE4 73 aa2.8□□□□□ -1.96
PRDM2-201ENST00000235372 PLECQ15149 4684 aaKnown RBP2.8□□□□□ -1.96
PRDM2-201ENST00000235372 LCE2BO14633 110 aa2.79□□□□□ -1.96
PRDM2-201ENST00000235372 KIAA1109Q2LD37 5005 aa2.79□□□□□ -1.96
PRDM2-201ENST00000235372 PKHD1L1Q86WI1 4243 aa2.79□□□□□ -1.96
PRDM2-201ENST00000235372 DNHD1Q96M86 4753 aa2.78□□□□□ -1.96
PRDM2-201ENST00000235372 MT2AP02795 61 aa2.77□□□□□ -1.97
PRDM2-201ENST00000235372 RYR2Q92736 4967 aa2.77□□□□□ -1.97
PRDM2-201ENST00000235372 DNAH11Q96DT5 4516 aa2.76□□□□□ -1.97
PRDM2-201ENST00000235372 MYCBP2O75592 4640 aa2.76□□□□□ -1.97
PRDM2-201ENST00000235372 DYNC1H1Q14204 4646 aaKnown RBP2.74□□□□□ -1.97
PRDM2-201ENST00000235372 DNAH17Q9UFH2 4485 aa2.73□□□□□ -1.97
PRDM2-201ENST00000235372 LPAP08519 4548 aa2.71□□□□□ -1.98
PRDM2-201ENST00000235372 PKD1P98161 4303 aa2.7□□□□□ -1.98
PRDM2-201ENST00000235372 DNAH8Q96JB1 4490 aa2.7□□□□□ -1.98
PRDM2-201ENST00000235372 MT1FP04733 61 aa2.68□□□□□ -1.98
PRDM2-201ENST00000235372 DNAH5Q8TE73 4624 aa2.68□□□□□ -1.98
PRDM2-201ENST00000235372 KRTAP4-1Q9BYQ7 146 aa2.67□□□□□ -1.98
PRDM2-201ENST00000235372 RYR3Q15413 4870 aa2.67□□□□□ -1.98
PRDM2-201ENST00000235372 MT1GP13640 62 aa2.67□□□□□ -1.98
PRDM2-201ENST00000235372 HERC1Q15751 4861 aa2.66□□□□□ -1.98
PRDM2-201ENST00000235372 LCE2CQ5TA81 110 aa2.66□□□□□ -1.98
PRDM2-201ENST00000235372 LRP1BQ9NZR2 4599 aa2.66□□□□□ -1.98
PRDM2-201ENST00000235372 LCE3DQ9BYE3 92 aa2.65□□□□□ -1.98
PRDM2-201ENST00000235372 HYDINQ4G0P3 5121 aa2.65□□□□□ -1.98
PRDM2-201ENST00000235372 SACSQ9NZJ4 4579 aa2.62□□□□□ -1.99
PRDM2-201ENST00000235372 TNXBP22105 4242 aa2.62□□□□□ -1.99
PRDM2-201ENST00000235372 ABCA13Q86UQ4 5058 aa2.62□□□□□ -1.99
PRDM2-201ENST00000235372 LCE2DQ5TA82 110 aaPredicted RBP2.6□□□□□ -1.99
PRDM2-201ENST00000235372 BIRC6Q9NR09 4857 aa2.6□□□□□ -1.99
PRDM2-201ENST00000235372 LCE3EQ5T5B0 92 aa2.59□□□□□ -1.99
PRDM2-201ENST00000235372 HSPG2P98160 4391 aa2.59□□□□□ -1.99
PRDM2-201ENST00000235372 KMT2CQ8NEZ4 4911 aaKnown RBP2.56□□□□□ -2
PRDM2-201ENST00000235372 SPRR5A0A1B0GTR4 108 aa2.54□□□□□ -2
PRDM2-201ENST00000235372 FAT1Q14517 4588 aa2.52□□□□□ -2.01
PRDM2-201ENST00000235372 HERC2O95714 4834 aa2.5□□□□□ -2.01
PRDM2-201ENST00000235372 LCE1BQ5T7P3 118 aa2.5□□□□□ -2.01
PRDM2-201ENST00000235372 KRTAP19-8Q3LI54 63 aa2.49□□□□□ -2.01
PRDM2-201ENST00000235372 MT4P47944 62 aa2.49□□□□□ -2.01
PRDM2-201ENST00000235372 PCLOQ9Y6V0 5065 aa2.49□□□□□ -2.01
PRDM2-201ENST00000235372 FAT3Q8TDW7 4589 aa2.48□□□□□ -2.01
PRDM2-201ENST00000235372 KRTAP4-8A0A0G2JLE6 195 aa2.48□□□□□ -2.01
PRDM2-201ENST00000235372 KRTAP4-8Q9BYQ9 185 aa2.48□□□□□ -2.01
PRDM2-201ENST00000235372 APOBP04114 4563 aaKnown RBP2.47□□□□□ -2.01
PRDM2-201ENST00000235372 EPPK1P58107 5090 aaKnown RBP2.46□□□□□ -2.02
PRDM2-201ENST00000235372 KRTAP19-1Q8IUB9 90 aa2.46□□□□□ -2.02
PRDM2-201ENST00000235372 PRM1P04553 51 aa2.46□□□□□ -2.02
PRDM2-201ENST00000235372 MT1XP80297 61 aa2.45□□□□□ -2.02
PRDM2-201ENST00000235372 MT3P25713 68 aa2.45□□□□□ -2.02
PRDM2-201ENST00000235372 HMCN2Q8NDA2 5059 aa2.44□□□□□ -2.02
PRDM2-201ENST00000235372 LCE1DQ5T752 114 aa2.43□□□□□ -2.02
PRDM2-201ENST00000235372 KRTAP4-7Q9BYR0 210 aa2.43□□□□□ -2.02
PRDM2-201ENST00000235372 RNF213Q63HN8 5207 aa2.43□□□□□ -2.02
PRDM2-201ENST00000235372 LRP1Q07954 4544 aaKnown RBP2.42□□□□□ -2.02
PRDM2-201ENST00000235372 KRTAP19-3Q7Z4W3 81 aa2.42□□□□□ -2.02
PRDM2-201ENST00000235372 KRTAP17-1Q9BYP8 105 aa2.4□□□□□ -2.02
PRDM2-201ENST00000235372 UBR4Q5T4S7 5183 aa2.4□□□□□ -2.03
PRDM2-201ENST00000235372 MT1LQ93083 61 aa2.38□□□□□ -2.03
PRDM2-201ENST00000235372 LCE5AQ5TCM9 118 aa2.35□□□□□ -2.03
PRDM2-201ENST00000235372 MT1BP07438 61 aa2.34□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms