RNA–Protein interactions for RNA: ENST00000216879.8

NSFL1C-201, Transcript of NSFL1 cofactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSFL1C, Length 3,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSFL1C-201ENST00000216879 S4R3F8 94 aa8.47□□□□□ -1.05
NSFL1C-201ENST00000216879 KRTAP12-2P59991 146 aa8.46□□□□□ -1.05
NSFL1C-201ENST00000216879 KRTAP10-8P60410 259 aa8.46□□□□□ -1.06
NSFL1C-201ENST00000216879 KRTAP3-3Q9BYR6 98 aa8.45□□□□□ -1.06
NSFL1C-201ENST00000216879 DYNC1H1Q14204 4646 aaKnown RBP8.44□□□□□ -1.06
NSFL1C-201ENST00000216879 RPS29P62273 56 aaKnown RBP8.43□□□□□ -1.06
NSFL1C-201ENST00000216879 KRTAP3-2Q9BYR7 98 aa8.42□□□□□ -1.06
NSFL1C-201ENST00000216879 SACSQ9NZJ4 4579 aa8.39□□□□□ -1.07
NSFL1C-201ENST00000216879 LRP1Q07954 4544 aaKnown RBP8.34□□□□□ -1.07
NSFL1C-201ENST00000216879 KRTAP15-1Q3LI76 137 aa8.34□□□□□ -1.07
NSFL1C-201ENST00000216879 HSPG2P98160 4391 aa8.31□□□□□ -1.08
NSFL1C-201ENST00000216879 APOBP04114 4563 aaKnown RBP8.29□□□□□ -1.08
NSFL1C-201ENST00000216879 KRTAP12-1P59990 96 aa8.26□□□□□ -1.09
NSFL1C-201ENST00000216879 XP32Q5T750 250 aa8.18□□□□□ -1.1
NSFL1C-201ENST00000216879 KRTAP10-4P60372 401 aaPredicted RBP8.15□□□□□ -1.11
NSFL1C-201ENST00000216879 FAT3Q8TDW7 4589 aa8.13□□□□□ -1.11
NSFL1C-201ENST00000216879 M0QZ58 72 aa8.13□□□□□ -1.11
NSFL1C-201ENST00000216879 PKHD1L1Q86WI1 4243 aa8.11□□□□□ -1.11
NSFL1C-201ENST00000216879 LPAP08519 4548 aa8.09□□□□□ -1.11
NSFL1C-201ENST00000216879 KMT2CQ8NEZ4 4911 aaKnown RBP8.04□□□□□ -1.12
NSFL1C-201ENST00000216879 Q5VSD8 79 aa8.04□□□□□ -1.12
NSFL1C-201ENST00000216879 R4GN34 69 aa8.04□□□□□ -1.12
NSFL1C-201ENST00000216879 LRP2P98164 4655 aa7.99□□□□□ -1.13
NSFL1C-201ENST00000216879 A0A0A0MQY5 61 aa7.96□□□□□ -1.13
NSFL1C-201ENST00000216879 KRTAP21-3Q3LHN1 58 aa7.96□□□□□ -1.14
NSFL1C-201ENST00000216879 PLAC4Q8WY50 150 aa7.96□□□□□ -1.14
NSFL1C-201ENST00000216879 A0A1B0GVY2 172 aa7.95□□□□□ -1.14
NSFL1C-201ENST00000216879 LUZP6Q538Z0 58 aa7.94□□□□□ -1.14
NSFL1C-201ENST00000216879 TNXBP22105 4242 aa7.87□□□□□ -1.15
NSFL1C-201ENST00000216879 LORP23490 312 aaPredicted RBP7.82□□□□□ -1.16
NSFL1C-201ENST00000216879 KIAA1109Q2LD37 5005 aa7.81□□□□□ -1.16
NSFL1C-201ENST00000216879 CAMK2N1Q7Z7J9 78 aa7.8□□□□□ -1.16
NSFL1C-201ENST00000216879 RYR1P21817 5038 aa7.74□□□□□ -1.17
NSFL1C-201ENST00000216879 KRTAP17-1Q9BYP8 105 aa7.7□□□□□ -1.18
NSFL1C-201ENST00000216879 RYR2Q92736 4967 aa7.69□□□□□ -1.18
NSFL1C-201ENST00000216879 RYR3Q15413 4870 aa7.65□□□□□ -1.19
NSFL1C-201ENST00000216879 MT1HL1P0DM35 61 aa7.62□□□□□ -1.19
NSFL1C-201ENST00000216879 J3QL48 77 aa7.58□□□□□ -1.2
NSFL1C-201ENST00000216879 EPPK1P58107 5090 aaKnown RBP7.56□□□□□ -1.2
NSFL1C-201ENST00000216879 ABCA13Q86UQ4 5058 aa7.56□□□□□ -1.2
NSFL1C-201ENST00000216879 MUC2Q02817 5179 aa7.45□□□□□ -1.22
NSFL1C-201ENST00000216879 KRTAP4-5Q9BYR2 181 aa7.43□□□□□ -1.22
NSFL1C-201ENST00000216879 PP632Q6XCG6 107 aa7.4□□□□□ -1.23
NSFL1C-201ENST00000216879 KRTAP4-1Q9BYQ7 146 aa7.38□□□□□ -1.23
NSFL1C-201ENST00000216879 SEC61BP60468 96 aaKnown RBP7.36□□□□□ -1.23
NSFL1C-201ENST00000216879 TNP1P09430 55 aa7.32□□□□□ -1.24
NSFL1C-201ENST00000216879 M0R2T5 61 aa7.2□□□□□ -1.26
NSFL1C-201ENST00000216879 MUC17Q685J3 4493 aa7.18□□□□□ -1.26
NSFL1C-201ENST00000216879 RNF213Q63HN8 5207 aa7.16□□□□□ -1.26
NSFL1C-201ENST00000216879 HERC1Q15751 4861 aa7.1□□□□□ -1.27
NSFL1C-201ENST00000216879 HERC2O95714 4834 aa7.1□□□□□ -1.27
NSFL1C-201ENST00000216879 FAT4Q6V0I7 4981 aa7.05□□□□□ -1.28
NSFL1C-201ENST00000216879 PCLOQ9Y6V0 5065 aa6.98□□□□□ -1.29
NSFL1C-201ENST00000216879 KRTAP19-2Q3LHN2 52 aa6.95□□□□□ -1.3
NSFL1C-201ENST00000216879 LCE3AQ5TA76 89 aa6.93□□□□□ -1.3
NSFL1C-201ENST00000216879 SPRR5A0A1B0GTR4 108 aa6.91□□□□□ -1.3
NSFL1C-201ENST00000216879 UBR4Q5T4S7 5183 aa6.9□□□□□ -1.31
NSFL1C-201ENST00000216879 FLGP20930 4061 aaPredicted RBP6.88□□□□□ -1.31
NSFL1C-201ENST00000216879 PRO2289Q9P1D8 64 aa6.74□□□□□ -1.33
NSFL1C-201ENST00000216879 HMCN2Q8NDA2 5059 aa6.74□□□□□ -1.33
NSFL1C-201ENST00000216879 KRTAP23-1A1A580 65 aa6.73□□□□□ -1.33
NSFL1C-201ENST00000216879 KRTAP10-10P60014 251 aa6.73□□□□□ -1.33
NSFL1C-201ENST00000216879 BIRC6Q9NR09 4857 aa6.69□□□□□ -1.34
NSFL1C-201ENST00000216879 FSIP2Q5CZC0 6907 aa6.69□□□□□ -1.34
NSFL1C-201ENST00000216879 KRTAP19-1Q8IUB9 90 aa6.67□□□□□ -1.34
NSFL1C-201ENST00000216879 SPRR2GQ9BYE4 73 aa6.57□□□□□ -1.36
NSFL1C-201ENST00000216879 KRTAP12-3P60328 96 aa6.53□□□□□ -1.36
NSFL1C-201ENST00000216879 INE1O15225 51 aa6.51□□□□□ -1.37
NSFL1C-201ENST00000216879 MT1FP04733 61 aa6.49□□□□□ -1.37
NSFL1C-201ENST00000216879 LCE2CQ5TA81 110 aa6.48□□□□□ -1.37
NSFL1C-201ENST00000216879 KRTAP10-12P60413 245 aa6.45□□□□□ -1.38
NSFL1C-201ENST00000216879 KRTAP8-1Q8IUC2 63 aa6.45□□□□□ -1.38
NSFL1C-201ENST00000216879 USH2AO75445 5202 aa6.43□□□□□ -1.38
NSFL1C-201ENST00000216879 MT2AP02795 61 aa6.41□□□□□ -1.38
NSFL1C-201ENST00000216879 MT1HP80294 61 aa6.37□□□□□ -1.39
NSFL1C-201ENST00000216879 KMT2DO14686 5537 aa6.37□□□□□ -1.39
NSFL1C-201ENST00000216879 KRTAP10-7P60409 375 aaPredicted RBP6.36□□□□□ -1.39
NSFL1C-201ENST00000216879 KRTAP10-5P60370 271 aa6.33□□□□□ -1.4
NSFL1C-201ENST00000216879 MT1XP80297 61 aa6.33□□□□□ -1.4
NSFL1C-201ENST00000216879 MT1BP07438 61 aa6.25□□□□□ -1.41
NSFL1C-201ENST00000216879 KRTAP9-8Q9BYQ0 159 aa6.22□□□□□ -1.41
NSFL1C-201ENST00000216879 KRTAP19-5Q3LI72 72 aa6.16□□□□□ -1.42
NSFL1C-201ENST00000216879 KRTAP19-8Q3LI54 63 aa6.14□□□□□ -1.43
NSFL1C-201ENST00000216879 LCE3CQ5T5A8 94 aa6.07□□□□□ -1.44
NSFL1C-201ENST00000216879 KRTAP4-7Q9BYR0 210 aa6.03□□□□□ -1.44
NSFL1C-201ENST00000216879 KRTAP4-8A0A0G2JLE6 195 aa6.02□□□□□ -1.45
NSFL1C-201ENST00000216879 KRTAP4-8Q9BYQ9 185 aa6.02□□□□□ -1.45
NSFL1C-201ENST00000216879 KRTAP9-6A8MVA2 160 aa5.99□□□□□ -1.45
NSFL1C-201ENST00000216879 OBSCNQ5VST9 7968 aa5.98□□□□□ -1.45
NSFL1C-201ENST00000216879 KRTAP9-3Q9BYQ3 159 aa5.91□□□□□ -1.46
NSFL1C-201ENST00000216879 DSTQ03001 7570 aaKnown RBP5.86□□□□□ -1.47
NSFL1C-201ENST00000216879 CRCT1Q9UGL9 99 aa5.82□□□□□ -1.48
NSFL1C-201ENST00000216879 SYNE1Q8NF91 8797 aaKnown RBP5.78□□□□□ -1.48
NSFL1C-201ENST00000216879 LCE2BO14633 110 aa5.76□□□□□ -1.49
NSFL1C-201ENST00000216879 FCGBPQ9Y6R7 5405 aaPredicted RBP5.7□□□□□ -1.5
NSFL1C-201ENST00000216879 KRTAP2-3P0C7H8 128 aa5.65□□□□□ -1.51
NSFL1C-201ENST00000216879 KRTAP2-4Q9BYR9 128 aa5.65□□□□□ -1.51
NSFL1C-201ENST00000216879 KRTAP2-1Q9BYU5 128 aa5.65□□□□□ -1.51
NSFL1C-201ENST00000216879 KRTAP19-7Q3SYF9 63 aa5.61□□□□□ -1.51
NSFL1C-201ENST00000216879 LOC100996750A0A140TA64 210 aa5.59□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms