RNA–Protein interactions for RNA: ENST00000198939.6

CHERP-201, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 5 BASIC

Gene CHERP, Length 4,084 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-201ENST00000198939 LUZP6Q538Z0 58 aa5.66□□□□□ -1.5
CHERP-201ENST00000198939 EPPK1P58107 5090 aaKnown RBP5.65□□□□□ -1.5
CHERP-201ENST00000198939 C20orf166-AS1Q96NR2 134 aa5.65□□□□□ -1.5
CHERP-201ENST00000198939 RYR1P21817 5038 aa5.64□□□□□ -1.51
CHERP-201ENST00000198939 KRTAP13-2Q52LG2 175 aa5.64□□□□□ -1.51
CHERP-201ENST00000198939 KRTAP1-4P0C5Y4 121 aa5.62□□□□□ -1.51
CHERP-201ENST00000198939 C10orf95Q9H7T3 257 aa5.62□□□□□ -1.51
CHERP-201ENST00000198939 P0C880 135 aa5.58□□□□□ -1.52
CHERP-201ENST00000198939 HSPG2P98160 4391 aa5.58□□□□□ -1.52
CHERP-201ENST00000198939 KIAA1109Q2LD37 5005 aa5.58□□□□□ -1.52
CHERP-201ENST00000198939 COX6B2Q6YFQ2 88 aa5.58□□□□□ -1.52
CHERP-201ENST00000198939 KRTAP4-5Q9BYR2 181 aa5.58□□□□□ -1.52
CHERP-201ENST00000198939 KRTAP17-1Q9BYP8 105 aa5.57□□□□□ -1.52
CHERP-201ENST00000198939 KRTAP10-8P60410 259 aa5.56□□□□□ -1.52
CHERP-201ENST00000198939 VPS13BQ7Z7G8 4022 aa5.55□□□□□ -1.52
CHERP-201ENST00000198939 RPS29P62273 56 aaKnown RBP5.54□□□□□ -1.52
CHERP-201ENST00000198939 HERC2O95714 4834 aa5.52□□□□□ -1.53
CHERP-201ENST00000198939 FAT1Q14517 4588 aa5.51□□□□□ -1.53
CHERP-201ENST00000198939 PKHD1L1Q86WI1 4243 aa5.51□□□□□ -1.53
CHERP-201ENST00000198939 MT1HL1P0DM35 61 aa5.48□□□□□ -1.53
CHERP-201ENST00000198939 KRTAP3-1Q9BYR8 98 aa5.45□□□□□ -1.54
CHERP-201ENST00000198939 S4R3F8 94 aa5.42□□□□□ -1.54
CHERP-201ENST00000198939 TPRXLQ17RH7 258 aa5.42□□□□□ -1.54
CHERP-201ENST00000198939 FAT3Q8TDW7 4589 aa5.34□□□□□ -1.56
CHERP-201ENST00000198939 ABCA13Q86UQ4 5058 aa5.33□□□□□ -1.56
CHERP-201ENST00000198939 KRTAP15-1Q3LI76 137 aa5.32□□□□□ -1.56
CHERP-201ENST00000198939 CAMK2N1Q7Z7J9 78 aa5.31□□□□□ -1.56
CHERP-201ENST00000198939 R4GN34 69 aa5.3□□□□□ -1.56
CHERP-201ENST00000198939 KRTAP13-4Q3LI77 160 aa5.3□□□□□ -1.56
CHERP-201ENST00000198939 M0QZ58 72 aa5.28□□□□□ -1.56
CHERP-201ENST00000198939 LRP1Q07954 4544 aaKnown RBP5.28□□□□□ -1.56
CHERP-201ENST00000198939 KRTAP10-6P60371 365 aaPredicted RBP5.28□□□□□ -1.56
CHERP-201ENST00000198939 SEC61BP60468 96 aaKnown RBP5.27□□□□□ -1.57
CHERP-201ENST00000198939 TNXBP22105 4242 aa5.26□□□□□ -1.57
CHERP-201ENST00000198939 PLAC4Q8WY50 150 aa5.26□□□□□ -1.57
CHERP-201ENST00000198939 MYCBP2O75592 4640 aa5.26□□□□□ -1.57
CHERP-201ENST00000198939 PCLOQ9Y6V0 5065 aa5.25□□□□□ -1.57
CHERP-201ENST00000198939 KRTAP12-2P59991 146 aa5.2□□□□□ -1.58
CHERP-201ENST00000198939 KRTAP3-2Q9BYR7 98 aa5.18□□□□□ -1.58
CHERP-201ENST00000198939 KRTAP3-3Q9BYR6 98 aa5.18□□□□□ -1.58
CHERP-201ENST00000198939 XP32Q5T750 250 aa5.17□□□□□ -1.58
CHERP-201ENST00000198939 KRTAP12-1P59990 96 aa5.13□□□□□ -1.59
CHERP-201ENST00000198939 M0R2T5 61 aa5.01□□□□□ -1.61
CHERP-201ENST00000198939 HERC1Q15751 4861 aa5.01□□□□□ -1.61
CHERP-201ENST00000198939 HMCN2Q8NDA2 5059 aa4.99□□□□□ -1.61
CHERP-201ENST00000198939 PP632Q6XCG6 107 aa4.91□□□□□ -1.62
CHERP-201ENST00000198939 MUC17Q685J3 4493 aa4.89□□□□□ -1.63
CHERP-201ENST00000198939 LPAP08519 4548 aa4.88□□□□□ -1.63
CHERP-201ENST00000198939 LRP2P98164 4655 aa4.86□□□□□ -1.63
CHERP-201ENST00000198939 TNP1P09430 55 aa4.86□□□□□ -1.63
CHERP-201ENST00000198939 KRTAP4-1Q9BYQ7 146 aa4.84□□□□□ -1.64
CHERP-201ENST00000198939 UBR4Q5T4S7 5183 aa4.73□□□□□ -1.65
CHERP-201ENST00000198939 RNF213Q63HN8 5207 aa4.71□□□□□ -1.65
CHERP-201ENST00000198939 KRTAP19-2Q3LHN2 52 aa4.68□□□□□ -1.66
CHERP-201ENST00000198939 LCE2CQ5TA81 110 aa4.66□□□□□ -1.66
CHERP-201ENST00000198939 LORP23490 312 aaPredicted RBP4.66□□□□□ -1.66
CHERP-201ENST00000198939 MT1HP80294 61 aa4.64□□□□□ -1.67
CHERP-201ENST00000198939 PRO2289Q9P1D8 64 aa4.59□□□□□ -1.67
CHERP-201ENST00000198939 LCE2AQ5TA79 106 aaPredicted RBP4.58□□□□□ -1.68
CHERP-201ENST00000198939 MUC2Q02817 5179 aa4.56□□□□□ -1.68
CHERP-201ENST00000198939 FAT4Q6V0I7 4981 aa4.54□□□□□ -1.68
CHERP-201ENST00000198939 FLGP20930 4061 aaPredicted RBP4.53□□□□□ -1.68
CHERP-201ENST00000198939 INE1O15225 51 aa4.46□□□□□ -1.69
CHERP-201ENST00000198939 KRTAP10-10P60014 251 aa4.45□□□□□ -1.7
CHERP-201ENST00000198939 SPRR5A0A1B0GTR4 108 aa4.43□□□□□ -1.7
CHERP-201ENST00000198939 KRTAP23-1A1A580 65 aa4.42□□□□□ -1.7
CHERP-201ENST00000198939 KRTAP9-8Q9BYQ0 159 aa4.41□□□□□ -1.7
CHERP-201ENST00000198939 MT2AP02795 61 aa4.4□□□□□ -1.7
CHERP-201ENST00000198939 MT1FP04733 61 aa4.35□□□□□ -1.71
CHERP-201ENST00000198939 LCE2DQ5TA82 110 aaPredicted RBP4.33□□□□□ -1.72
CHERP-201ENST00000198939 FSIP2Q5CZC0 6907 aa4.31□□□□□ -1.72
CHERP-201ENST00000198939 KRTAP9-3Q9BYQ3 159 aa4.28□□□□□ -1.72
CHERP-201ENST00000198939 SPRR2GQ9BYE4 73 aa4.26□□□□□ -1.73
CHERP-201ENST00000198939 LCE3AQ5TA76 89 aa4.22□□□□□ -1.73
CHERP-201ENST00000198939 KRTAP9-2Q9BYQ4 174 aa4.21□□□□□ -1.74
CHERP-201ENST00000198939 KRTAP19-1Q8IUB9 90 aa4.19□□□□□ -1.74
CHERP-201ENST00000198939 KRTAP19-8Q3LI54 63 aa4.17□□□□□ -1.74
CHERP-201ENST00000198939 LCE2BO14633 110 aa4.15□□□□□ -1.74
CHERP-201ENST00000198939 KRTAP12-3P60328 96 aa4.11□□□□□ -1.75
CHERP-201ENST00000198939 MT1BP07438 61 aa4.07□□□□□ -1.76
CHERP-201ENST00000198939 CRCT1Q9UGL9 99 aa4.07□□□□□ -1.76
CHERP-201ENST00000198939 KRTAP8-1Q8IUC2 63 aa4.05□□□□□ -1.76
CHERP-201ENST00000198939 KRTAP10-12P60413 245 aa4.04□□□□□ -1.76
CHERP-201ENST00000198939 KRTAP19-6Q3LI70 58 aa4.03□□□□□ -1.76
CHERP-201ENST00000198939 KRTAP9-6A0A140TA67 174 aa4□□□□□ -1.77
CHERP-201ENST00000198939 KRTAP10-5P60370 271 aa3.97□□□□□ -1.77
CHERP-201ENST00000198939 USH2AO75445 5202 aa3.97□□□□□ -1.77
CHERP-201ENST00000198939 MT1XP80297 61 aa3.9□□□□□ -1.79
CHERP-201ENST00000198939 SSPOA2VEC9 5147 aa3.85□□□□□ -1.79
CHERP-201ENST00000198939 OBSCNQ5VST9 7968 aa3.82□□□□□ -1.8
CHERP-201ENST00000198939 KRTAP10-7P60409 375 aaPredicted RBP3.78□□□□□ -1.8
CHERP-201ENST00000198939 LCE3CQ5T5A8 94 aa3.77□□□□□ -1.81
CHERP-201ENST00000198939 FCGBPQ9Y6R7 5405 aaPredicted RBP3.76□□□□□ -1.81
CHERP-201ENST00000198939 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.74□□□□□ -1.81
CHERP-201ENST00000198939 SYNE1Q8NF91 8797 aaKnown RBP3.74□□□□□ -1.81
CHERP-201ENST00000198939 KMT2DO14686 5537 aa3.71□□□□□ -1.81
CHERP-201ENST00000198939 KRTAP19-5Q3LI72 72 aa3.71□□□□□ -1.81
CHERP-201ENST00000198939 KRTAP9-7A8MTY7 169 aa3.67□□□□□ -1.82
CHERP-201ENST00000198939 KRTAP6-3Q3LI67 103 aa3.66□□□□□ -1.82
CHERP-201ENST00000198939 DSTQ03001 7570 aaKnown RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms