RNA–Protein interactions for RNA: ENSMUST00000111180.8

Trim50-202, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim50, Length 1,456 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-202ENSMUST00000111180 Gphb5Q812B2 130 aa9.28□□□□□ -0.92
Trim50-202ENSMUST00000111180 Olfr435Q8VFS3 313 aa9.28□□□□□ -0.92
Trim50-202ENSMUST00000111180 Glrx2Q923X4 156 aa9.28□□□□□ -0.92
Trim50-202ENSMUST00000111180 Dusp14Q9JLY7 198 aa9.28□□□□□ -0.92
Trim50-202ENSMUST00000111180 BlnkQ9QUN3 457 aa9.28□□□□□ -0.92
Trim50-202ENSMUST00000111180 Ighv1-9A0A0A6YW37 117 aa9.28□□□□□ -0.92
Trim50-202ENSMUST00000111180 Zfp825A0A1Y7VK00 292 aa9.28□□□□□ -0.92
Trim50-202ENSMUST00000111180 Saa3P04918 122 aa9.28□□□□□ -0.92
Trim50-202ENSMUST00000111180 Vmn1r70Q8R254 298 aa9.28□□□□□ -0.92
Trim50-202ENSMUST00000111180 Btf3l4Q9CQH7 158 aaKnown RBP9.28□□□□□ -0.92
Trim50-202ENSMUST00000111180 Shisal2bQ9D1Y9 158 aa9.28□□□□□ -0.92
Trim50-202ENSMUST00000111180 Fam216aQ9DB54 251 aa9.28□□□□□ -0.92
Trim50-202ENSMUST00000111180 Dnah10D3YYQ8 4591 aa9.27□□□□□ -0.92
Trim50-202ENSMUST00000111180 Igkv4-81A0A0G2JEY5 119 aa9.27□□□□□ -0.93
Trim50-202ENSMUST00000111180 Gm15056F6ZR08 88 aa9.27□□□□□ -0.93
Trim50-202ENSMUST00000111180 Gm3443F7CCV5 94 aa9.27□□□□□ -0.93
Trim50-202ENSMUST00000111180 Klk1b4P00757 256 aa9.27□□□□□ -0.93
Trim50-202ENSMUST00000111180 Ighv1-62-3P01754 117 aa9.27□□□□□ -0.93
Trim50-202ENSMUST00000111180 Znf239P24399 201 aa9.27□□□□□ -0.93
Trim50-202ENSMUST00000111180 A930004D18RikQ8C8W7 157 aa9.27□□□□□ -0.93
Trim50-202ENSMUST00000111180 Olfr1195Q8VG21 308 aa9.27□□□□□ -0.93
Trim50-202ENSMUST00000111180 Olfr982Q8VGB3 321 aa9.27□□□□□ -0.93
Trim50-202ENSMUST00000111180 Lyzl1Q9CPX3 148 aa9.27□□□□□ -0.93
Trim50-202ENSMUST00000111180 Fxyd4Q9D2W0 88 aa9.27□□□□□ -0.93
Trim50-202ENSMUST00000111180 PerpQ9JK95 193 aa9.27□□□□□ -0.93
Trim50-202ENSMUST00000111180 Muc6Q80T03 2850 aa9.26□□□□□ -0.93
Trim50-202ENSMUST00000111180 Ighv1-50A0A075B5W1 117 aa9.26□□□□□ -0.93
Trim50-202ENSMUST00000111180 Ighv2-3A0A075B696 115 aa9.26□□□□□ -0.93
Trim50-202ENSMUST00000111180 Trav6d-7A0A075B6B0 112 aa9.26□□□□□ -0.93
Trim50-202ENSMUST00000111180 Trbv30A0A0B4J1P1 111 aa9.26□□□□□ -0.93
Trim50-202ENSMUST00000111180 Trbv17A0A140T8P8 114 aa9.26□□□□□ -0.93
Trim50-202ENSMUST00000111180 Rhox7bA6PW38 321 aa9.26□□□□□ -0.93
Trim50-202ENSMUST00000111180 Gm9602J3QPD5 205 aa9.26□□□□□ -0.93
Trim50-202ENSMUST00000111180 F2rl1P55086 399 aa9.26□□□□□ -0.93
Trim50-202ENSMUST00000111180 Rhox4dQ2MDG0 205 aa9.26□□□□□ -0.93
Trim50-202ENSMUST00000111180 Arl11Q6P3A9 176 aa9.26□□□□□ -0.93
Trim50-202ENSMUST00000111180 Aqp11Q8BHH1 271 aa9.26□□□□□ -0.93
Trim50-202ENSMUST00000111180 TctaQ8VEA7 122 aa9.26□□□□□ -0.93
Trim50-202ENSMUST00000111180 MrapQ9D159 127 aa9.26□□□□□ -0.93
Trim50-202ENSMUST00000111180 Sorl1O88307 2215 aaKnown RBP9.25□□□□□ -0.93
Trim50-202ENSMUST00000111180 Trav7-4A0A075B6C1 113 aa9.25□□□□□ -0.93
Trim50-202ENSMUST00000111180 Reg3gO09049 174 aa9.25□□□□□ -0.93
Trim50-202ENSMUST00000111180 Sap30O88574 220 aa9.25□□□□□ -0.93
Trim50-202ENSMUST00000111180 Foxh1O88621 401 aa9.25□□□□□ -0.93
Trim50-202ENSMUST00000111180 Sox15P43267 231 aa9.25□□□□□ -0.93
Trim50-202ENSMUST00000111180 Trdv2-2Q5R1A4 116 aa9.25□□□□□ -0.93
Trim50-202ENSMUST00000111180 Trav7d-4Q5R1H9 113 aa9.25□□□□□ -0.93
Trim50-202ENSMUST00000111180 Ypel4Q65Z93 127 aa9.25□□□□□ -0.93
Trim50-202ENSMUST00000111180 Gm10334Q792Y8 246 aa9.25□□□□□ -0.93
Trim50-202ENSMUST00000111180 Olfr1380Q7TQT5 311 aa9.25□□□□□ -0.93
Trim50-202ENSMUST00000111180 Gm5105Q8C6Y9 112 aa9.25□□□□□ -0.93
Trim50-202ENSMUST00000111180 Klk7Q91VE3 249 aa9.25□□□□□ -0.93
Trim50-202ENSMUST00000111180 Ceacam11Q9D0Z8 303 aa9.25□□□□□ -0.93
Trim50-202ENSMUST00000111180 Trav9-2A0A075B647 113 aa9.24□□□□□ -0.93
Trim50-202ENSMUST00000111180 Trav9-4A0A0B4J1K2 113 aa9.24□□□□□ -0.93
Trim50-202ENSMUST00000111180 Gm21874J3QNZ6 232 aa9.24□□□□□ -0.93
Trim50-202ENSMUST00000111180 Rpl19P84099 196 aaKnown RBP9.24□□□□□ -0.93
Trim50-202ENSMUST00000111180 Cdx4Q07424 282 aa9.24□□□□□ -0.93
Trim50-202ENSMUST00000111180 QrfpQ8CE23 124 aa9.24□□□□□ -0.93
Trim50-202ENSMUST00000111180 Mpv17lQ99MS3 194 aa9.24□□□□□ -0.93
Trim50-202ENSMUST00000111180 ManbalQ9D8X0 85 aa9.24□□□□□ -0.93
Trim50-202ENSMUST00000111180 Tspan4Q9DCK3 238 aa9.24□□□□□ -0.93
Trim50-202ENSMUST00000111180 Plekhb2Q9QZC7 221 aa9.24□□□□□ -0.93
Trim50-202ENSMUST00000111180 FasnP19096 2504 aaKnown RBP9.24□□□□□ -0.93
Trim50-202ENSMUST00000111180 Sub1P11031 127 aaKnown RBP9.23□□□□□ -0.93
Trim50-202ENSMUST00000111180 Rhox4eQ504P9 205 aa9.23□□□□□ -0.93
Trim50-202ENSMUST00000111180 Slc17a2Q5SZA1 478 aa9.23□□□□□ -0.93
Trim50-202ENSMUST00000111180 Olfr1381Q7TQT4 311 aa9.23□□□□□ -0.93
Trim50-202ENSMUST00000111180 ChtopQ9CY57 249 aaKnown RBP9.23□□□□□ -0.93
Trim50-202ENSMUST00000111180 Them7Q9DCP4 223 aa9.23□□□□□ -0.93
Trim50-202ENSMUST00000111180 Gm7075D3Z497 112 aa9.22□□□□□ -0.93
Trim50-202ENSMUST00000111180 Vmn1r1E9PVR6 306 aa9.22□□□□□ -0.93
Trim50-202ENSMUST00000111180 Olfr1116E9PXB8 307 aa9.22□□□□□ -0.93
Trim50-202ENSMUST00000111180 GfyJ3KML8 504 aa9.22□□□□□ -0.93
Trim50-202ENSMUST00000111180 Twist1P26687 206 aa9.22□□□□□ -0.93
Trim50-202ENSMUST00000111180 Smim9Q3V0X1 137 aa9.22□□□□□ -0.93
Trim50-202ENSMUST00000111180 Gm94Q3V2D2 93 aa9.22□□□□□ -0.93
Trim50-202ENSMUST00000111180 Il22ra1Q80XZ4 581 aa9.22□□□□□ -0.93
Trim50-202ENSMUST00000111180 Muc15Q8C6Z1 331 aa9.22□□□□□ -0.93
Trim50-202ENSMUST00000111180 Q9D7E4 109 aa9.22□□□□□ -0.93
Trim50-202ENSMUST00000111180 Notch3Q61982 2318 aa9.22□□□□□ -0.93
Trim50-202ENSMUST00000111180 Trav7n-4A0A075B620 113 aa9.21□□□□□ -0.93
Trim50-202ENSMUST00000111180 Trbv1A0A0B4J1G7 116 aa9.21□□□□□ -0.93
Trim50-202ENSMUST00000111180 Vmn1r119E9Q4H3 307 aa9.21□□□□□ -0.93
Trim50-202ENSMUST00000111180 Gm4133K9J7G6 307 aa9.21□□□□□ -0.93
Trim50-202ENSMUST00000111180 Tpt1P63028 172 aaKnown RBP9.21□□□□□ -0.93
Trim50-202ENSMUST00000111180 Fa2hQ5MPP0 372 aa9.21□□□□□ -0.93
Trim50-202ENSMUST00000111180 Olfr317Q5NCD6 327 aa9.21□□□□□ -0.93
Trim50-202ENSMUST00000111180 Megf10Q6DIB5 1147 aa9.21□□□□□ -0.93
Trim50-202ENSMUST00000111180 Prss3Q792Z0 246 aaKnown RBP9.21□□□□□ -0.93
Trim50-202ENSMUST00000111180 Psmb11Q8BG41 302 aa9.21□□□□□ -0.93
Trim50-202ENSMUST00000111180 Olfr702Q920Z2 318 aa9.21□□□□□ -0.93
Trim50-202ENSMUST00000111180 Ube2tQ9CQ37 204 aa9.21□□□□□ -0.93
Trim50-202ENSMUST00000111180 Tmed6Q9CQG0 239 aa9.21□□□□□ -0.93
Trim50-202ENSMUST00000111180 RhohQ9D3G9 191 aa9.21□□□□□ -0.93
Trim50-202ENSMUST00000111180 SelenokQ9JLJ1 94 aa9.21□□□□□ -0.93
Trim50-202ENSMUST00000111180 Ighv3-8A0A075B5T0 131 aa9.21□□□□□ -0.94
Trim50-202ENSMUST00000111180 Trav16nA0A075B634 117 aa9.21□□□□□ -0.94
Trim50-202ENSMUST00000111180 Smim10l1A0A087WNQ7 89 aa9.21□□□□□ -0.94
Trim50-202ENSMUST00000111180 Ly6c2P0CW03 131 aa9.21□□□□□ -0.94
Retrieved 100 of 22,080 RNA–protein pairs in 99.8 ms