RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 VsirQ9D659 308 aa13.27□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 PerpQ9JK95 193 aa13.27□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 Clec5aQ9R007 190 aa13.27□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 Med13lQ6JPI3 2207 aa13.27□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 P01811 117 aa13.27□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 Zic4Q61467 341 aa13.27□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 Igkv4-70A0A0B4J1I5 116 aa13.27□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 H2-DMb1P35737 261 aa13.27□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 Gm21370Q3T9V6 190 aa13.27□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 Fancd2osQ9D4K4 178 aa13.27□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 Ighv3-8A0A075B5T0 131 aa13.26□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 Cited2O35740 269 aa13.26□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 Zfp36l1P23950 338 aa13.26□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 Tex26Q0VB26 296 aa13.26□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 Dmrtc2Q8CGW9 370 aa13.26□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 Isg15Q64339 161 aaKnown RBP13.26□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 Tex48Q9DA81 110 aa13.26□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 Plxna2P70207 1894 aa13.26□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 Cd69P37217 199 aa13.26□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 Q8C708 225 aa13.26□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 Zfyve26Q5DU37 2529 aa13.26□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 1500009C09RikD3YYW9 81 aa13.25□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 Gm9970F6ZED4 185 aa13.25□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 Vwa8Q8CC88 1905 aa13.25□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 Gm16686Q3UMN9 131 aa13.25□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 9130213A22RikQ3V3T2 120 aa13.25□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 Klhdc3Q8VEM9 382 aa13.25□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 Sdk2Q6V4S5 2176 aa13.25□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 P03985 172 aa13.25□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 5730522E02RikQ5SP45 163 aa13.25□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 FancmQ8BGE5 2021 aa13.25□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 Gm20379A0A087WR34 119 aa13.24□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 Ighv1-19A0A0A6YWX0 117 aa13.24□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 KprpB2RUR4 657 aa13.24□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 LoxP28301 411 aa13.24□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 Ighv1-39A0A075B5V5 117 aa13.24□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 Tmem86bQ497J1 226 aa13.24□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 Gtsf1Q9DAN6 167 aa13.24□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 SeboxP70368 190 aa13.24□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 Ube2v1Q9CZY3 147 aa13.24□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 PkdrejQ9Z0T6 2126 aa13.24□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 Tdgf1P51865 171 aa13.24□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 Gm29423A0A087WRM1 55 aa13.23□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 Hbb-b2P02089 147 aa13.23□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 Spg11Q3UHA3 2430 aa13.23□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 Wnk1P83741 2377 aa13.23□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 Gm12169F2Z474 250 aa13.23□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 Gm6793B2RXM2 351 aa13.23□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 Sp5Q9JHX2 398 aa13.23□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 ApomQ9Z1R3 190 aa13.23□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 Lyg1Q9D7Q0 197 aa13.22□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 Fam216bQ8CC14 138 aa13.22□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 TdhQ8K3F7 373 aa13.22□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 Ly86O88188 162 aa13.22□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 Dpm2Q9Z324 84 aa13.22□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 Q08AU9 97 aa13.21□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 Tmem30bQ8BHG3 353 aa13.21□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 Usf3B2RUQ2 2221 aa13.21□□□□□ -0.29
Ubfd1-201ENSMUST00000033158 Igkv1-99F6XWB2 120 aa13.21□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 PolP10400 120 aa13.21□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 Tcl1b4P56844 120 aa13.21□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 Gm20517G3UVU6 152 aa13.2□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 Smlr1J3QMJ4 66 aa13.2□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 Defa2P28309 93 aa13.2□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 Card19Q9D1I2 183 aa13.2□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 Ankrd39Q9D2X0 183 aa13.2□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 Dph3Q8K0W9 82 aa13.2□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 Leap2Q91V13 76 aa13.2□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 Mfap4Q9D1H9 257 aa13.2□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 Cspg4Q8VHY0 2327 aa13.2□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 Ighv1-58A0A075B5W9 117 aa13.2□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 Ighv8-4A0A0A6YW26 117 aa13.19□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 MyofQ69ZN7 2048 aaKnown RBP13.19□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 Gm17677B3GLJ5 116 aa13.19□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 Slc25a48Q8BW66 306 aa13.19□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 F930015N05RikQ8C3A3 210 aa13.19□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 Tnfrsf13bQ9ET35 249 aa13.19□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 Ighv3-6P18531 116 aa13.19□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 Gm6040Q4QY32 63 aa13.18□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 Trav7d-3Q5R1I1 112 aa13.18□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 Tspan13Q9D8C2 204 aa13.18□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 Nlrc5C3VPR6 1915 aa13.18□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 Erdr1J3QMM0 206 aa13.18□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 Gm26727M0QWT1 121 aa13.18□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 Gm28038F7BCN9 126 aa13.18□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 Q8R092 253 aa13.18□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 SNORCQ9CXL7 121 aa13.18□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 Trav14n-2A0A0G2JDF5 121 aa13.18□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 Gm5129F6YHA9 99 aa13.18□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 Ndufc2Q9CQ54 120 aa13.18□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 Vmo1Q5SXG7 201 aa13.17□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 9930022D16RikQ8BG27 128 aa13.17□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 Mapk1ip1lQ8BH93 242 aa13.17□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 Gm9513B3GLJ6 99 aa13.17□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 Sfta2E9PXB6 77 aa13.17□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 Trav3-1Q5R1I8 114 aa13.17□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 Ndufa4Q62425 82 aaKnown RBP13.17□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 Gm5294J3QP53 216 aa13.17□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 P04940 107 aa13.17□□□□□ -0.3
Ubfd1-201ENSMUST00000033158 P04941 107 aa13.17□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 48.7 ms