RNA–Protein interactions for RNA: ENST00000641104.1

MACF1-235, Transcript of microtubule-actin crosslinking factor 1, humanhuman

Gene MACF1, Length 5,460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-235ENST00000641104 NBEAQ8NFP9 2946 aa6.79□□□□□ -1.32
MACF1-235ENST00000641104 ZZEF1O43149 2961 aa6.79□□□□□ -1.32
MACF1-235ENST00000641104 ADGRG4Q8IZF6 3080 aa6.78□□□□□ -1.32
MACF1-235ENST00000641104 KALRNO60229 2985 aa6.78□□□□□ -1.32
MACF1-235ENST00000641104 VCANP13611 3396 aa6.77□□□□□ -1.33
MACF1-235ENST00000641104 KRTAP13-2Q52LG2 175 aa6.77□□□□□ -1.33
MACF1-235ENST00000641104 KRTAP13-1Q8IUC0 172 aa6.77□□□□□ -1.33
MACF1-235ENST00000641104 EYSQ5T1H1 3165 aa6.76□□□□□ -1.33
MACF1-235ENST00000641104 NIPBLQ6KC79 2804 aaeCLIP6.74□□□□□ -1.33
MACF1-235ENST00000641104 CRYBG3Q68DQ2 2970 aa6.73□□□□□ -1.33
MACF1-235ENST00000641104 A8MUU9 505 aa6.72□□□□□ -1.33
MACF1-235ENST00000641104 LRBAP50851 2863 aa6.71□□□□□ -1.34
MACF1-235ENST00000641104 FREM2Q5SZK8 3169 aa6.71□□□□□ -1.34
MACF1-235ENST00000641104 DMXL1Q9Y485 3027 aa6.7□□□□□ -1.34
MACF1-235ENST00000641104 CELSR2Q9HCU4 2923 aa6.67□□□□□ -1.34
MACF1-235ENST00000641104 ZANQ9Y493 2812 aa6.66□□□□□ -1.34
MACF1-235ENST00000641104 A8MU10 97 aa6.66□□□□□ -1.34
MACF1-235ENST00000641104 C20orf166-AS1Q96NR2 134 aa6.64□□□□□ -1.35
MACF1-235ENST00000641104 KRTAP25-1Q3LHN0 102 aa6.61□□□□□ -1.35
MACF1-235ENST00000641104 A6NN06 94 aa6.6□□□□□ -1.35
MACF1-235ENST00000641104 DCHS2Q6V1P9 2916 aa6.6□□□□□ -1.35
MACF1-235ENST00000641104 ASH1LQ9NR48 2969 aaKnown RBP6.59□□□□□ -1.35
MACF1-235ENST00000641104 DNAH14Q0VDD8 3507 aa6.55□□□□□ -1.36
MACF1-235ENST00000641104 CFAP47Q6ZTR5 3102 aa6.53□□□□□ -1.36
MACF1-235ENST00000641104 NF1P21359 2839 aa6.51□□□□□ -1.37
MACF1-235ENST00000641104 USP34Q70CQ2 3546 aa6.5□□□□□ -1.37
MACF1-235ENST00000641104 SPTBN5Q9NRC6 3674 aaKnown RBP6.5□□□□□ -1.37
MACF1-235ENST00000641104 TNP1P09430 55 aa6.5□□□□□ -1.37
MACF1-235ENST00000641104 KRTAP1-4P0C5Y4 121 aa6.45□□□□□ -1.38
MACF1-235ENST00000641104 TENM3Q9P273 2699 aa6.44□□□□□ -1.38
MACF1-235ENST00000641104 KRTAP16-1A8MUX0 517 aa6.43□□□□□ -1.38
MACF1-235ENST00000641104 SPEGQ15772 3267 aa6.43□□□□□ -1.38
MACF1-235ENST00000641104 XP32Q5T750 250 aa6.42□□□□□ -1.38
MACF1-235ENST00000641104 HRNRQ86YZ3 2850 aaPredicted RBP6.41□□□□□ -1.38
MACF1-235ENST00000641104 MXRA5Q9NR99 2828 aa6.41□□□□□ -1.38
MACF1-235ENST00000641104 LOC400499M0QZD8 3231 aa6.41□□□□□ -1.38
MACF1-235ENST00000641104 FBN2P35556 2912 aa6.4□□□□□ -1.38
MACF1-235ENST00000641104 TENM1Q9UKZ4 2725 aa6.38□□□□□ -1.39
MACF1-235ENST00000641104 NDUFAF8A1L188 74 aa6.35□□□□□ -1.39
MACF1-235ENST00000641104 TPRXLQ17RH7 258 aa6.32□□□□□ -1.4
MACF1-235ENST00000641104 PP632Q6XCG6 107 aa6.32□□□□□ -1.4
MACF1-235ENST00000641104 C10orf95Q9H7T3 257 aa6.32□□□□□ -1.4
MACF1-235ENST00000641104 TENM2Q9NT68 2774 aa6.31□□□□□ -1.4
MACF1-235ENST00000641104 KRTAP10-8P60410 259 aa6.3□□□□□ -1.4
MACF1-235ENST00000641104 PKD1L1Q8TDX9 2849 aa6.3□□□□□ -1.4
MACF1-235ENST00000641104 DCHS1Q96JQ0 3298 aa6.3□□□□□ -1.4
MACF1-235ENST00000641104 A0A1B0GVY2 172 aa6.28□□□□□ -1.4
MACF1-235ENST00000641104 MYO15AQ9UKN7 3530 aa6.27□□□□□ -1.41
MACF1-235ENST00000641104 H0YAA0 97 aa6.22□□□□□ -1.41
MACF1-235ENST00000641104 KRTAP13-3Q3SY46 172 aa6.2□□□□□ -1.42
MACF1-235ENST00000641104 KRTAP10-10P60014 251 aa6.18□□□□□ -1.42
MACF1-235ENST00000641104 CELSR1Q9NYQ6 3014 aa6.18□□□□□ -1.42
MACF1-235ENST00000641104 PDZD2O15018 2839 aa6.16□□□□□ -1.42
MACF1-235ENST00000641104 RELNP78509 3460 aa6.14□□□□□ -1.43
MACF1-235ENST00000641104 PRO2289Q9P1D8 64 aa6.13□□□□□ -1.43
MACF1-235ENST00000641104 P0C880 135 aa6.12□□□□□ -1.43
MACF1-235ENST00000641104 VWFP04275 2813 aa6.11□□□□□ -1.43
MACF1-235ENST00000641104 OTOGQ6ZRI0 2925 aa6.09□□□□□ -1.43
MACF1-235ENST00000641104 FBN1P35555 2871 aaKnown RBP6.07□□□□□ -1.44
MACF1-235ENST00000641104 TGP01266 2768 aa6.06□□□□□ -1.44
MACF1-235ENST00000641104 MUC3AQ02505 3323 aa6.01□□□□□ -1.45
MACF1-235ENST00000641104 LAMA5O15230 3695 aa5.99□□□□□ -1.45
MACF1-235ENST00000641104 ZFHX3Q15911 3703 aa5.99□□□□□ -1.45
MACF1-235ENST00000641104 WDFY3Q8IZQ1 3526 aa5.97□□□□□ -1.45
MACF1-235ENST00000641104 SRRM2Q9UQ35 2752 aaKnown RBP5.96□□□□□ -1.46
MACF1-235ENST00000641104 NBPF19A0A087WUL8 3843 aa5.93□□□□□ -1.46
MACF1-235ENST00000641104 ASPMQ8IZT6 3477 aa5.86□□□□□ -1.47
MACF1-235ENST00000641104 KRTAP12-2P59991 146 aa5.85□□□□□ -1.47
MACF1-235ENST00000641104 KRTAP13-4Q3LI77 160 aa5.81□□□□□ -1.48
MACF1-235ENST00000641104 DMDP11532 3685 aa5.79□□□□□ -1.48
MACF1-235ENST00000641104 KRTAP12-1P59990 96 aa5.77□□□□□ -1.49
MACF1-235ENST00000641104 SMG1Q96Q15 3661 aaKnown RBP5.76□□□□□ -1.49
MACF1-235ENST00000641104 KRTAP3-1Q9BYR8 98 aa5.74□□□□□ -1.49
MACF1-235ENST00000641104 ZFHX4Q86UP3 3567 aa5.71□□□□□ -1.5
MACF1-235ENST00000641104 FBN3Q75N90 2809 aa5.71□□□□□ -1.5
MACF1-235ENST00000641104 CSMD2Q7Z408 3487 aa5.65□□□□□ -1.5
MACF1-235ENST00000641104 ANK3Q12955 4377 aaKnown RBP5.64□□□□□ -1.51
MACF1-235ENST00000641104 CSMD1Q96PZ7 3565 aa5.64□□□□□ -1.51
MACF1-235ENST00000641104 KRTAP10-6P60371 365 aaPredicted RBP5.58□□□□□ -1.52
MACF1-235ENST00000641104 KRTAP15-1Q3LI76 137 aa5.58□□□□□ -1.52
MACF1-235ENST00000641104 COL7A1Q02388 2944 aa5.57□□□□□ -1.52
MACF1-235ENST00000641104 TRRAPQ9Y4A5 3859 aa5.54□□□□□ -1.52
MACF1-235ENST00000641104 MEGF8Q7Z7M0 2845 aa5.54□□□□□ -1.52
MACF1-235ENST00000641104 MT1HL1P0DM35 61 aa5.52□□□□□ -1.53
MACF1-235ENST00000641104 SPENQ96T58 3664 aaKnown RBP5.46□□□□□ -1.53
MACF1-235ENST00000641104 SVEP1Q4LDE5 3571 aa5.42□□□□□ -1.54
MACF1-235ENST00000641104 CUBNO60494 3623 aa5.38□□□□□ -1.55
MACF1-235ENST00000641104 KRTAP3-2Q9BYR7 98 aa5.37□□□□□ -1.55
MACF1-235ENST00000641104 KRTAP3-3Q9BYR6 98 aa5.37□□□□□ -1.55
MACF1-235ENST00000641104 KRTAP4-5Q9BYR2 181 aa5.36□□□□□ -1.55
MACF1-235ENST00000641104 KRTAP10-12P60413 245 aa5.35□□□□□ -1.55
MACF1-235ENST00000641104 KRTAP10-4P60372 401 aaPredicted RBP5.34□□□□□ -1.55
MACF1-235ENST00000641104 BSNQ9UPA5 3926 aa5.31□□□□□ -1.56
MACF1-235ENST00000641104 INE1O15225 51 aa5.23□□□□□ -1.57
MACF1-235ENST00000641104 HUWE1Q7Z6Z7 4374 aaKnown RBP5.22□□□□□ -1.57
MACF1-235ENST00000641104 CRCT1Q9UGL9 99 aa5.21□□□□□ -1.58
MACF1-235ENST00000641104 DNHD1Q96M86 4753 aa5.2□□□□□ -1.58
MACF1-235ENST00000641104 KRTAP12-3P60328 96 aa5.19□□□□□ -1.58
MACF1-235ENST00000641104 KRTAP23-1A1A580 65 aa5.17□□□□□ -1.58
MACF1-235ENST00000641104 LCE3AQ5TA76 89 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms