RNA–Protein interactions for RNA: ENST00000639501.1

PMS1-222, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-222ENST00000639501 UBE2DNLQ8IWF7 75 aa12.24□□□□□ -0.45
PMS1-222ENST00000639501 PRR26Q8N8Z3 221 aa12.23□□□□□ -0.45
PMS1-222ENST00000639501 DNAH8Q96JB1 4490 aa12.23□□□□□ -0.45
PMS1-222ENST00000639501 C7orf65Q6ZTY9 151 aa12.22□□□□□ -0.45
PMS1-222ENST00000639501 ANAPC11Q9NYG5 84 aa12.21□□□□□ -0.45
PMS1-222ENST00000639501 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.2□□□□□ -0.46
PMS1-222ENST00000639501 LINC00483Q53H64 154 aa12.19□□□□□ -0.46
PMS1-222ENST00000639501 PLECQ15149 4684 aaKnown RBP12.19□□□□□ -0.46
PMS1-222ENST00000639501 Q5W150 140 aa12.18□□□□□ -0.46
PMS1-222ENST00000639501 WWC2-AS2Q96NR7 200 aa12.18□□□□□ -0.46
PMS1-222ENST00000639501 ALMS1Q8TCU4 4167 aa12.18□□□□□ -0.46
PMS1-222ENST00000639501 CDK2AP2O75956 126 aa12.17□□□□□ -0.46
PMS1-222ENST00000639501 DYNC2H1Q8NCM8 4307 aaKnown RBP12.16□□□□□ -0.46
PMS1-222ENST00000639501 APLNQ9ULZ1 77 aa12.15□□□□□ -0.46
PMS1-222ENST00000639501 KRTAP13-3Q3SY46 172 aa12.12□□□□□ -0.47
PMS1-222ENST00000639501 SPACA4Q8TDM5 124 aa12.12□□□□□ -0.47
PMS1-222ENST00000639501 SPINK6Q6UWN8 80 aa12.09□□□□□ -0.47
PMS1-222ENST00000639501 HECTD4Q9Y4D8 3996 aa12.09□□□□□ -0.47
PMS1-222ENST00000639501 Q6ZRN7 208 aaPredicted RBP12.08□□□□□ -0.48
PMS1-222ENST00000639501 STARD9Q9P2P6 4700 aa12.08□□□□□ -0.48
PMS1-222ENST00000639501 PSORS1C2Q9UIG4 136 aa12.05□□□□□ -0.48
PMS1-222ENST00000639501 NBDYA0A0U1RRE5 68 aa12.03□□□□□ -0.48
PMS1-222ENST00000639501 NUPR2A6NF83 97 aa12.03□□□□□ -0.48
PMS1-222ENST00000639501 ZNF706Q9Y5V0 76 aaPredicted RBP12.02□□□□□ -0.48
PMS1-222ENST00000639501 PRAC1Q96KF2 57 aa12.02□□□□□ -0.49
PMS1-222ENST00000639501 LINC00313P59037 77 aa12.01□□□□□ -0.49
PMS1-222ENST00000639501 DNAH17Q9UFH2 4485 aa11.99□□□□□ -0.49
PMS1-222ENST00000639501 IGLV5-52A0A0A0MRZ9 124 aa11.99□□□□□ -0.49
PMS1-222ENST00000639501 ACYP2P14621 99 aa11.98□□□□□ -0.49
PMS1-222ENST00000639501 ADM2Q7Z4H4 148 aa11.98□□□□□ -0.49
PMS1-222ENST00000639501 ZNF861PO60384 105 aa11.94□□□□□ -0.5
PMS1-222ENST00000639501 DMAC1Q96GE9 116 aa11.94□□□□□ -0.5
PMS1-222ENST00000639501 RETNLBQ9BQ08 111 aa11.92□□□□□ -0.5
PMS1-222ENST00000639501 CIRBP-AS1Q8TBR5 109 aa11.91□□□□□ -0.5
PMS1-222ENST00000639501 VPS13DQ5THJ4 4388 aa11.91□□□□□ -0.5
PMS1-222ENST00000639501 DNAH2Q9P225 4427 aa11.88□□□□□ -0.51
PMS1-222ENST00000639501 A0A087WTM6 91 aa11.87□□□□□ -0.51
PMS1-222ENST00000639501 KMT2AQ03164 3969 aa11.86□□□□□ -0.51
PMS1-222ENST00000639501 A0A1B0GU69 56 aa11.86□□□□□ -0.51
PMS1-222ENST00000639501 RTL8CO15255 209 aa11.85□□□□□ -0.51
PMS1-222ENST00000639501 C8orf87E5RJ46 101 aa11.84□□□□□ -0.51
PMS1-222ENST00000639501 PLA2G1BP04054 148 aaKnown RBP11.81□□□□□ -0.52
PMS1-222ENST00000639501 SPATA8Q6RVD6 105 aa11.8□□□□□ -0.52
PMS1-222ENST00000639501 IGKV2-30P06310 120 aa11.78□□□□□ -0.52
PMS1-222ENST00000639501 FAM229AH3BQW9 127 aa11.76□□□□□ -0.53
PMS1-222ENST00000639501 IGLV7-43P04211 117 aa11.75□□□□□ -0.53
PMS1-222ENST00000639501 DNAH11Q96DT5 4516 aa11.73□□□□□ -0.53
PMS1-222ENST00000639501 MIR22HGQ0VDD5 57 aa11.73□□□□□ -0.53
PMS1-222ENST00000639501 DNAH6Q9C0G6 4158 aa11.72□□□□□ -0.53
PMS1-222ENST00000639501 LY6G6CO95867 125 aa11.71□□□□□ -0.53
PMS1-222ENST00000639501 UQCR11O14957 56 aa11.68□□□□□ -0.54
PMS1-222ENST00000639501 KRTAP16-1A8MUX0 517 aa11.66□□□□□ -0.54
PMS1-222ENST00000639501 LINC01554Q52M75 96 aa11.66□□□□□ -0.54
PMS1-222ENST00000639501 HYDINQ4G0P3 5121 aa11.66□□□□□ -0.54
PMS1-222ENST00000639501 SSBP3-AS1Q7Z2R9 100 aa11.65□□□□□ -0.54
PMS1-222ENST00000639501 IGKV2D-30A0A075B6S6 120 aa11.63□□□□□ -0.55
PMS1-222ENST00000639501 KRTAP13-2Q52LG2 175 aa11.6□□□□□ -0.55
PMS1-222ENST00000639501 DNAH5Q8TE73 4624 aa11.6□□□□□ -0.55
PMS1-222ENST00000639501 CSAG1Q6PB30 78 aa11.54□□□□□ -0.56
PMS1-222ENST00000639501 C1orf134Q5TEV5 83 aa11.54□□□□□ -0.56
PMS1-222ENST00000639501 SACSQ9NZJ4 4579 aa11.5□□□□□ -0.57
PMS1-222ENST00000639501 LRP1BQ9NZR2 4599 aa11.5□□□□□ -0.57
PMS1-222ENST00000639501 SPINK1P00995 79 aa11.49□□□□□ -0.57
PMS1-222ENST00000639501 KMT2CQ8NEZ4 4911 aaKnown RBP11.49□□□□□ -0.57
PMS1-222ENST00000639501 C4orf48Q5BLP8 95 aa11.45□□□□□ -0.58
PMS1-222ENST00000639501 Q8N1X5 172 aa11.44□□□□□ -0.58
PMS1-222ENST00000639501 KRTAP10-2P60368 255 aa11.39□□□□□ -0.59
PMS1-222ENST00000639501 VPS13BQ7Z7G8 4022 aa11.37□□□□□ -0.59
PMS1-222ENST00000639501 FAT2Q9NYQ8 4349 aa11.37□□□□□ -0.59
PMS1-222ENST00000639501 KRTAP1-4P0C5Y4 121 aa11.36□□□□□ -0.59
PMS1-222ENST00000639501 H0YAA0 97 aa11.32□□□□□ -0.6
PMS1-222ENST00000639501 Q6ZSA8 131 aa11.31□□□□□ -0.6
PMS1-222ENST00000639501 RYR2Q92736 4967 aa11.3□□□□□ -0.6
PMS1-222ENST00000639501 PKD1P98161 4303 aa11.29□□□□□ -0.6
PMS1-222ENST00000639501 TYMSOSQ8TAI1 123 aa11.28□□□□□ -0.6
PMS1-222ENST00000639501 H3BS24 57 aa11.26□□□□□ -0.61
PMS1-222ENST00000639501 A8MUU9 505 aa11.25□□□□□ -0.61
PMS1-222ENST00000639501 RYR3Q15413 4870 aa11.24□□□□□ -0.61
PMS1-222ENST00000639501 KRTAP10-1P60331 282 aa11.23□□□□□ -0.61
PMS1-222ENST00000639501 PKHD1P08F94 4074 aa11.22□□□□□ -0.61
PMS1-222ENST00000639501 LINC00304Q8N9R0 145 aa11.18□□□□□ -0.62
PMS1-222ENST00000639501 KRTAP25-1Q3LHN0 102 aa11.12□□□□□ -0.63
PMS1-222ENST00000639501 KRTAP3-1Q9BYR8 98 aa11.12□□□□□ -0.63
PMS1-222ENST00000639501 A0A1B0GU33 70 aa11.09□□□□□ -0.63
PMS1-222ENST00000639501 FLG2Q5D862 2391 aaPredicted RBP11.05□□□□□ -0.64
PMS1-222ENST00000639501 H1FX-AS1Q4G0G2 97 aa11.05□□□□□ -0.64
PMS1-222ENST00000639501 A0A1B0GVY2 172 aa11.03□□□□□ -0.64
PMS1-222ENST00000639501 C9orf92A6NGG3 77 aa11.03□□□□□ -0.64
PMS1-222ENST00000639501 CRIPTQ9P021 101 aa11□□□□□ -0.65
PMS1-222ENST00000639501 DYNC1H1Q14204 4646 aaKnown RBP11□□□□□ -0.65
PMS1-222ENST00000639501 ROMO1P60602 79 aa10.96□□□□□ -0.66
PMS1-222ENST00000639501 C20orf166-AS1Q96NR2 134 aa10.93□□□□□ -0.66
PMS1-222ENST00000639501 COX6B2Q6YFQ2 88 aa10.88□□□□□ -0.67
PMS1-222ENST00000639501 PKHD1L1Q86WI1 4243 aa10.87□□□□□ -0.67
PMS1-222ENST00000639501 RPS29P62273 56 aaKnown RBP10.87□□□□□ -0.67
PMS1-222ENST00000639501 APOBP04114 4563 aaKnown RBP10.86□□□□□ -0.67
PMS1-222ENST00000639501 EPPK1P58107 5090 aaKnown RBP10.86□□□□□ -0.67
PMS1-222ENST00000639501 FAT1Q14517 4588 aa10.81□□□□□ -0.68
PMS1-222ENST00000639501 SMR3BP02814 79 aaPredicted RBP10.79□□□□□ -0.68
PMS1-222ENST00000639501 K7ERS5 55 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms