RNA–Protein interactions for RNA: ENST00000638632.1

KCNMA1-242, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 9,904 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-242ENST00000638632 TACC2O95359 2948 aa3.43□□□□□ -1.86
KCNMA1-242ENST00000638632 SRRM2Q9UQ35 2752 aaKnown RBP3.42□□□□□ -1.86
KCNMA1-242ENST00000638632 Q5VSD8 79 aa3.42□□□□□ -1.86
KCNMA1-242ENST00000638632 PCNTO95613 3336 aa3.42□□□□□ -1.86
KCNMA1-242ENST00000638632 LAMA2P24043 3122 aaKnown RBP3.42□□□□□ -1.86
KCNMA1-242ENST00000638632 KRTAP10-8P60410 259 aa3.41□□□□□ -1.86
KCNMA1-242ENST00000638632 KRTAP13-4Q3LI77 160 aa3.4□□□□□ -1.87
KCNMA1-242ENST00000638632 DCHS2Q6V1P9 2916 aa3.39□□□□□ -1.87
KCNMA1-242ENST00000638632 PRUNE2Q8WUY3 3088 aa3.39□□□□□ -1.87
KCNMA1-242ENST00000638632 XP32Q5T750 250 aa3.38□□□□□ -1.87
KCNMA1-242ENST00000638632 KRTAP10-2P60368 255 aa3.37□□□□□ -1.87
KCNMA1-242ENST00000638632 M0R2T5 61 aa3.37□□□□□ -1.87
KCNMA1-242ENST00000638632 TENM2Q9NT68 2774 aa3.36□□□□□ -1.87
KCNMA1-242ENST00000638632 TNRC18O15417 2968 aaPredicted RBP3.35□□□□□ -1.87
KCNMA1-242ENST00000638632 KRTAP1-4P0C5Y4 121 aa3.34□□□□□ -1.87
KCNMA1-242ENST00000638632 ZZEF1O43149 2961 aa3.34□□□□□ -1.87
KCNMA1-242ENST00000638632 KRTAP12-1P59990 96 aa3.33□□□□□ -1.88
KCNMA1-242ENST00000638632 C5orf42Q9H799 3197 aa3.33□□□□□ -1.88
KCNMA1-242ENST00000638632 MXRA5Q9NR99 2828 aa3.32□□□□□ -1.88
KCNMA1-242ENST00000638632 CRYBG3Q68DQ2 2970 aa3.32□□□□□ -1.88
KCNMA1-242ENST00000638632 KRTAP12-2P59991 146 aa3.31□□□□□ -1.88
KCNMA1-242ENST00000638632 HRNRQ86YZ3 2850 aaPredicted RBP3.31□□□□□ -1.88
KCNMA1-242ENST00000638632 TENM4Q6N022 2769 aa3.31□□□□□ -1.88
KCNMA1-242ENST00000638632 VPS13AQ96RL7 3174 aa3.3□□□□□ -1.88
KCNMA1-242ENST00000638632 TRIOO75962 3097 aa3.3□□□□□ -1.88
KCNMA1-242ENST00000638632 DMXL2Q8TDJ6 3036 aa3.29□□□□□ -1.88
KCNMA1-242ENST00000638632 FBN2P35556 2912 aa3.29□□□□□ -1.88
KCNMA1-242ENST00000638632 COL12A1Q99715 3063 aa3.27□□□□□ -1.89
KCNMA1-242ENST00000638632 GOLGB1Q14789 3259 aaKnown RBP3.26□□□□□ -1.89
KCNMA1-242ENST00000638632 PKD1L1Q8TDX9 2849 aa3.26□□□□□ -1.89
KCNMA1-242ENST00000638632 VWFP04275 2813 aa3.25□□□□□ -1.89
KCNMA1-242ENST00000638632 KRTAP10-6P60371 365 aaPredicted RBP3.23□□□□□ -1.89
KCNMA1-242ENST00000638632 KRTAP3-3Q9BYR6 98 aa3.23□□□□□ -1.89
KCNMA1-242ENST00000638632 KRTAP3-2Q9BYR7 98 aa3.23□□□□□ -1.89
KCNMA1-242ENST00000638632 WDFY4Q6ZS81 3184 aa3.21□□□□□ -1.9
KCNMA1-242ENST00000638632 ADGRG4Q8IZF6 3080 aa3.21□□□□□ -1.9
KCNMA1-242ENST00000638632 KRTAP3-1Q9BYR8 98 aa3.18□□□□□ -1.9
KCNMA1-242ENST00000638632 ATMQ13315 3056 aa3.17□□□□□ -1.9
KCNMA1-242ENST00000638632 FREM2Q5SZK8 3169 aa3.16□□□□□ -1.9
KCNMA1-242ENST00000638632 UTRNP46939 3433 aa3.15□□□□□ -1.91
KCNMA1-242ENST00000638632 LAMA1P25391 3075 aa3.13□□□□□ -1.91
KCNMA1-242ENST00000638632 DMXL1Q9Y485 3027 aa3.11□□□□□ -1.91
KCNMA1-242ENST00000638632 MEGF8Q7Z7M0 2845 aa3.11□□□□□ -1.91
KCNMA1-242ENST00000638632 RANBP2P49792 3224 aaKnown RBP3.11□□□□□ -1.91
KCNMA1-242ENST00000638632 HTTP42858 3142 aa3.1□□□□□ -1.91
KCNMA1-242ENST00000638632 USP34Q70CQ2 3546 aa3.09□□□□□ -1.92
KCNMA1-242ENST00000638632 BOD1L1Q8NFC6 3051 aa3.08□□□□□ -1.92
KCNMA1-242ENST00000638632 CELSR1Q9NYQ6 3014 aa3.08□□□□□ -1.92
KCNMA1-242ENST00000638632 FBN3Q75N90 2809 aa3.07□□□□□ -1.92
KCNMA1-242ENST00000638632 XIRP2A4UGR9 3374 aa3.06□□□□□ -1.92
KCNMA1-242ENST00000638632 COL7A1Q02388 2944 aa3.06□□□□□ -1.92
KCNMA1-242ENST00000638632 ZFHX3Q15911 3703 aa3.05□□□□□ -1.92
KCNMA1-242ENST00000638632 REV3LO60673 3130 aa3.01□□□□□ -1.93
KCNMA1-242ENST00000638632 MKI67P46013 3256 aaKnown RBP3□□□□□ -1.93
KCNMA1-242ENST00000638632 DNAH14Q0VDD8 3507 aa2.97□□□□□ -1.93
KCNMA1-242ENST00000638632 SPTBN5Q9NRC6 3674 aaKnown RBP2.97□□□□□ -1.93
KCNMA1-242ENST00000638632 COL6A3P12111 3177 aa2.96□□□□□ -1.94
KCNMA1-242ENST00000638632 UNC80Q8N2C7 3258 aa2.96□□□□□ -1.94
KCNMA1-242ENST00000638632 FBN1P35555 2871 aaKnown RBP2.92□□□□□ -1.94
KCNMA1-242ENST00000638632 KRTAP10-10P60014 251 aa2.92□□□□□ -1.94
KCNMA1-242ENST00000638632 LAMA3Q16787 3333 aa2.9□□□□□ -1.95
KCNMA1-242ENST00000638632 CFAP47Q6ZTR5 3102 aa2.89□□□□□ -1.95
KCNMA1-242ENST00000638632 BRCA2P51587 3418 aa2.88□□□□□ -1.95
KCNMA1-242ENST00000638632 KRTAP19-4Q3LI73 84 aa2.86□□□□□ -1.95
KCNMA1-242ENST00000638632 VCANP13611 3396 aa2.86□□□□□ -1.95
KCNMA1-242ENST00000638632 OTOGQ6ZRI0 2925 aa2.85□□□□□ -1.95
KCNMA1-242ENST00000638632 KRTAP12-3P60328 96 aa2.85□□□□□ -1.95
KCNMA1-242ENST00000638632 KRTAP10-12P60413 245 aa2.85□□□□□ -1.95
KCNMA1-242ENST00000638632 CELSR3Q9NYQ7 3312 aa2.84□□□□□ -1.95
KCNMA1-242ENST00000638632 DMDP11532 3685 aa2.84□□□□□ -1.96
KCNMA1-242ENST00000638632 MYO15AQ9UKN7 3530 aa2.83□□□□□ -1.96
KCNMA1-242ENST00000638632 A0A1B0GVY2 172 aa2.82□□□□□ -1.96
KCNMA1-242ENST00000638632 SPEGQ15772 3267 aa2.82□□□□□ -1.96
KCNMA1-242ENST00000638632 NBPF19A0A087WUL8 3843 aa2.8□□□□□ -1.96
KCNMA1-242ENST00000638632 SPENQ96T58 3664 aaKnown RBP2.79□□□□□ -1.96
KCNMA1-242ENST00000638632 LCE2DQ5TA82 110 aaPredicted RBP2.78□□□□□ -1.96
KCNMA1-242ENST00000638632 SPRR5A0A1B0GTR4 108 aa2.77□□□□□ -1.97
KCNMA1-242ENST00000638632 EYSQ5T1H1 3165 aa2.77□□□□□ -1.97
KCNMA1-242ENST00000638632 WDFY3Q8IZQ1 3526 aa2.76□□□□□ -1.97
KCNMA1-242ENST00000638632 CDH23Q9H251 3354 aa2.75□□□□□ -1.97
KCNMA1-242ENST00000638632 LOC400499M0QZD8 3231 aa2.75□□□□□ -1.97
KCNMA1-242ENST00000638632 ALMS1Q8TCU4 4167 aa2.74□□□□□ -1.97
KCNMA1-242ENST00000638632 SZT2Q5T011 3432 aa2.73□□□□□ -1.97
KCNMA1-242ENST00000638632 SMG1Q96Q15 3661 aaKnown RBP2.73□□□□□ -1.97
KCNMA1-242ENST00000638632 LCE3AQ5TA76 89 aa2.71□□□□□ -1.98
KCNMA1-242ENST00000638632 VPS13CQ709C8 3753 aa2.69□□□□□ -1.98
KCNMA1-242ENST00000638632 LAMA5O15230 3695 aa2.68□□□□□ -1.98
KCNMA1-242ENST00000638632 KRTAP8-1Q8IUC2 63 aa2.68□□□□□ -1.98
KCNMA1-242ENST00000638632 LCE2CQ5TA81 110 aa2.67□□□□□ -1.98
KCNMA1-242ENST00000638632 AKAP9Q99996 3911 aa2.66□□□□□ -1.98
KCNMA1-242ENST00000638632 DCHS1Q96JQ0 3298 aa2.66□□□□□ -1.98
KCNMA1-242ENST00000638632 ZFHX4Q86UP3 3567 aa2.64□□□□□ -1.99
KCNMA1-242ENST00000638632 ASPMQ8IZT6 3477 aa2.64□□□□□ -1.99
KCNMA1-242ENST00000638632 KRTAP10-4P60372 401 aaPredicted RBP2.64□□□□□ -1.99
KCNMA1-242ENST00000638632 RELNP78509 3460 aa2.63□□□□□ -1.99
KCNMA1-242ENST00000638632 MT1HL1P0DM35 61 aa2.61□□□□□ -1.99
KCNMA1-242ENST00000638632 TRRAPQ9Y4A5 3859 aa2.61□□□□□ -1.99
KCNMA1-242ENST00000638632 LCE2AQ5TA79 106 aaPredicted RBP2.58□□□□□ -2
KCNMA1-242ENST00000638632 LCE2BO14633 110 aa2.58□□□□□ -2
KCNMA1-242ENST00000638632 BSNQ9UPA5 3926 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms