RNA–Protein interactions for RNA: ENST00000635856.1

CHD2-221, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-221ENST00000635856 KRTAP1-1Q07627 177 aa3.67□□□□□ -1.82
CHD2-221ENST00000635856 A0A1B0GU33 70 aa3.65□□□□□ -1.82
CHD2-221ENST00000635856 KRTAP11-1Q8IUC1 163 aa3.65□□□□□ -1.82
CHD2-221ENST00000635856 HRNRQ86YZ3 2850 aaPredicted RBP3.63□□□□□ -1.83
CHD2-221ENST00000635856 IGKV2D-30A0A075B6S6 120 aa3.63□□□□□ -1.83
CHD2-221ENST00000635856 IGKV2-30P06310 120 aa3.63□□□□□ -1.83
CHD2-221ENST00000635856 PSORS1C2Q9UIG4 136 aa3.62□□□□□ -1.83
CHD2-221ENST00000635856 PANO1I0J062 215 aa3.62□□□□□ -1.83
CHD2-221ENST00000635856 K7EIL1 84 aa3.62□□□□□ -1.83
CHD2-221ENST00000635856 A0A087WTM6 91 aa3.61□□□□□ -1.83
CHD2-221ENST00000635856 Q96NJ1 140 aa3.61□□□□□ -1.83
CHD2-221ENST00000635856 MGAM2Q2M2H8 2515 aa3.61□□□□□ -1.83
CHD2-221ENST00000635856 SPRR1BP22528 89 aa3.6□□□□□ -1.83
CHD2-221ENST00000635856 CIRBP-AS1Q8TBR5 109 aa3.6□□□□□ -1.83
CHD2-221ENST00000635856 FBN1P35555 2871 aaKnown RBP3.58□□□□□ -1.84
CHD2-221ENST00000635856 C14orf177Q52M58 125 aa3.58□□□□□ -1.84
CHD2-221ENST00000635856 CAMK2N1Q7Z7J9 78 aa3.58□□□□□ -1.84
CHD2-221ENST00000635856 J3QL48 77 aa3.58□□□□□ -1.84
CHD2-221ENST00000635856 FLG2Q5D862 2391 aaPredicted RBP3.57□□□□□ -1.84
CHD2-221ENST00000635856 LINC01556Q5JQF7 62 aa3.57□□□□□ -1.84
CHD2-221ENST00000635856 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.57□□□□□ -1.84
CHD2-221ENST00000635856 H1FX-AS1Q4G0G2 97 aa3.56□□□□□ -1.84
CHD2-221ENST00000635856 MXRA5Q9NR99 2828 aa3.55□□□□□ -1.84
CHD2-221ENST00000635856 H0YAA0 97 aa3.55□□□□□ -1.84
CHD2-221ENST00000635856 NBDYA0A0U1RRE5 68 aa3.55□□□□□ -1.84
CHD2-221ENST00000635856 KRTAP15-1Q3LI76 137 aa3.55□□□□□ -1.84
CHD2-221ENST00000635856 Q6ZSA8 131 aa3.55□□□□□ -1.84
CHD2-221ENST00000635856 H3BNG1 76 aa3.54□□□□□ -1.84
CHD2-221ENST00000635856 NSD1Q96L73 2696 aaPredicted RBP3.54□□□□□ -1.84
CHD2-221ENST00000635856 KRTAP10-3P60369 221 aa3.53□□□□□ -1.84
CHD2-221ENST00000635856 WWC2-AS2Q96NR7 200 aa3.53□□□□□ -1.84
CHD2-221ENST00000635856 AKAP9Q99996 3911 aa3.53□□□□□ -1.84
CHD2-221ENST00000635856 NOTCH1P46531 2555 aa3.52□□□□□ -1.85
CHD2-221ENST00000635856 RPL37P61927 97 aaKnown RBP3.52□□□□□ -1.85
CHD2-221ENST00000635856 TGP01266 2768 aa3.52□□□□□ -1.85
CHD2-221ENST00000635856 KRTAP21-3Q3LHN1 58 aa3.52□□□□□ -1.85
CHD2-221ENST00000635856 ANAPC11Q9NYG5 84 aa3.51□□□□□ -1.85
CHD2-221ENST00000635856 DNHD1Q96M86 4753 aa3.51□□□□□ -1.85
CHD2-221ENST00000635856 PKD1L1Q8TDX9 2849 aa3.51□□□□□ -1.85
CHD2-221ENST00000635856 Q8N1X5 172 aa3.5□□□□□ -1.85
CHD2-221ENST00000635856 TENM1Q9UKZ4 2725 aa3.5□□□□□ -1.85
CHD2-221ENST00000635856 APLNQ9ULZ1 77 aa3.49□□□□□ -1.85
CHD2-221ENST00000635856 KRTAP10-11P60412 298 aa3.49□□□□□ -1.85
CHD2-221ENST00000635856 KRTAP7-1Q8IUC3 87 aa3.48□□□□□ -1.85
CHD2-221ENST00000635856 KRTAP13-3Q3SY46 172 aa3.47□□□□□ -1.85
CHD2-221ENST00000635856 A0A0D9SG42 100 aa3.46□□□□□ -1.86
CHD2-221ENST00000635856 TPRXLQ17RH7 258 aa3.45□□□□□ -1.86
CHD2-221ENST00000635856 COX6B2Q6YFQ2 88 aa3.45□□□□□ -1.86
CHD2-221ENST00000635856 C10orf95Q9H7T3 257 aa3.45□□□□□ -1.86
CHD2-221ENST00000635856 TRRAPQ9Y4A5 3859 aa3.45□□□□□ -1.86
CHD2-221ENST00000635856 VWFP04275 2813 aa3.43□□□□□ -1.86
CHD2-221ENST00000635856 TYMSOSQ8TAI1 123 aa3.43□□□□□ -1.86
CHD2-221ENST00000635856 NBEAL2Q6ZNJ1 2754 aa3.43□□□□□ -1.86
CHD2-221ENST00000635856 FBN3Q75N90 2809 aa3.38□□□□□ -1.87
CHD2-221ENST00000635856 PLAC4Q8WY50 150 aa3.37□□□□□ -1.87
CHD2-221ENST00000635856 ALMS1Q8TCU4 4167 aa3.33□□□□□ -1.88
CHD2-221ENST00000635856 SPACA4Q8TDM5 124 aa3.33□□□□□ -1.88
CHD2-221ENST00000635856 KRTAP13-1Q8IUC0 172 aa3.32□□□□□ -1.88
CHD2-221ENST00000635856 MEGF8Q7Z7M0 2845 aa3.31□□□□□ -1.88
CHD2-221ENST00000635856 ANK3Q12955 4377 aaKnown RBP3.31□□□□□ -1.88
CHD2-221ENST00000635856 DMBT1Q9UGM3 2413 aaPredicted RBP3.3□□□□□ -1.88
CHD2-221ENST00000635856 S4R3F8 94 aa3.3□□□□□ -1.88
CHD2-221ENST00000635856 CSMD3Q7Z407 3707 aa3.27□□□□□ -1.89
CHD2-221ENST00000635856 TENM2Q9NT68 2774 aa3.27□□□□□ -1.89
CHD2-221ENST00000635856 TENM3Q9P273 2699 aa3.25□□□□□ -1.89
CHD2-221ENST00000635856 PRO2289Q9P1D8 64 aa3.23□□□□□ -1.89
CHD2-221ENST00000635856 STAB2Q8WWQ8 2551 aa3.22□□□□□ -1.89
CHD2-221ENST00000635856 COL7A1Q02388 2944 aa3.2□□□□□ -1.9
CHD2-221ENST00000635856 R4GN34 69 aa3.2□□□□□ -1.9
CHD2-221ENST00000635856 SRRM2Q9UQ35 2752 aaKnown RBP3.19□□□□□ -1.9
CHD2-221ENST00000635856 XP32Q5T750 250 aa3.18□□□□□ -1.9
CHD2-221ENST00000635856 ANK2Q01484 3957 aa3.17□□□□□ -1.9
CHD2-221ENST00000635856 Q6ZRN7 208 aaPredicted RBP3.16□□□□□ -1.9
CHD2-221ENST00000635856 PRKDCP78527 4128 aaKnown RBP3.16□□□□□ -1.9
CHD2-221ENST00000635856 KRTAP1-5Q9BYS1 174 aa3.15□□□□□ -1.9
CHD2-221ENST00000635856 KRTAP12-2P59991 146 aa3.14□□□□□ -1.91
CHD2-221ENST00000635856 C9orf92A6NGG3 77 aa3.14□□□□□ -1.91
CHD2-221ENST00000635856 SMR3BP02814 79 aaPredicted RBP3.13□□□□□ -1.91
CHD2-221ENST00000635856 KRTAP13-4Q3LI77 160 aa3.13□□□□□ -1.91
CHD2-221ENST00000635856 PP632Q6XCG6 107 aa3.13□□□□□ -1.91
CHD2-221ENST00000635856 KMT2CQ8NEZ4 4911 aaKnown RBP3.12□□□□□ -1.91
CHD2-221ENST00000635856 M0QZ58 72 aa3.12□□□□□ -1.91
CHD2-221ENST00000635856 KRTAP10-8P60410 259 aa3.12□□□□□ -1.91
CHD2-221ENST00000635856 INE1O15225 51 aa3.11□□□□□ -1.91
CHD2-221ENST00000635856 KRTAP3-1Q9BYR8 98 aa3.11□□□□□ -1.91
CHD2-221ENST00000635856 KRTAP10-6P60371 365 aaPredicted RBP3.1□□□□□ -1.91
CHD2-221ENST00000635856 KRTAP12-1P59990 96 aa3.1□□□□□ -1.91
CHD2-221ENST00000635856 KRTAP10-2P60368 255 aa3.08□□□□□ -1.92
CHD2-221ENST00000635856 KRTAP10-1P60331 282 aa3.08□□□□□ -1.92
CHD2-221ENST00000635856 KRTAP3-2Q9BYR7 98 aa3.07□□□□□ -1.92
CHD2-221ENST00000635856 KRTAP13-2Q52LG2 175 aa3.06□□□□□ -1.92
CHD2-221ENST00000635856 Q5VSD8 79 aa3.06□□□□□ -1.92
CHD2-221ENST00000635856 RYR3Q15413 4870 aa3.04□□□□□ -1.92
CHD2-221ENST00000635856 CMYA5Q8N3K9 4069 aa3.03□□□□□ -1.92
CHD2-221ENST00000635856 KRTAP23-1A1A580 65 aa3.02□□□□□ -1.93
CHD2-221ENST00000635856 HYDINQ4G0P3 5121 aa3.01□□□□□ -1.93
CHD2-221ENST00000635856 LYSTQ99698 3801 aa3.01□□□□□ -1.93
CHD2-221ENST00000635856 RPS29P62273 56 aaKnown RBP2.99□□□□□ -1.93
CHD2-221ENST00000635856 EPPK1P58107 5090 aaKnown RBP2.97□□□□□ -1.93
CHD2-221ENST00000635856 FRAS1Q86XX4 4008 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms