RNA–Protein interactions for RNA: ENST00000624873.3

SRGAP2-217, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SRGAP2, Length 4,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-217ENST00000624873 ASB16-AS1Q495Z4 193 aa5.9□□□□□ -1.46
SRGAP2-217ENST00000624873 H3BS24 57 aa5.9□□□□□ -1.47
SRGAP2-217ENST00000624873 Q5W150 140 aa5.9□□□□□ -1.47
SRGAP2-217ENST00000624873 CYP4F30PQ9H0H9 118 aa5.89□□□□□ -1.47
SRGAP2-217ENST00000624873 H7BZZ5 65 aa5.89□□□□□ -1.47
SRGAP2-217ENST00000624873 LINC01554Q52M75 96 aa5.89□□□□□ -1.47
SRGAP2-217ENST00000624873 KRTAP13-2Q52LG2 175 aa5.89□□□□□ -1.47
SRGAP2-217ENST00000624873 Q8N9P0 234 aaPredicted RBP5.88□□□□□ -1.47
SRGAP2-217ENST00000624873 Q5XG85 94 aa5.86□□□□□ -1.47
SRGAP2-217ENST00000624873 S4R3F8 94 aa5.86□□□□□ -1.47
SRGAP2-217ENST00000624873 KTN1-AS1Q86SY8 53 aa5.84□□□□□ -1.47
SRGAP2-217ENST00000624873 NBPF19A0A087WUL8 3843 aa5.82□□□□□ -1.48
SRGAP2-217ENST00000624873 FBN1P35555 2871 aaKnown RBP5.82□□□□□ -1.48
SRGAP2-217ENST00000624873 MIR22HGQ0VDD5 57 aa5.81□□□□□ -1.48
SRGAP2-217ENST00000624873 LCA10Q71F78 164 aa5.81□□□□□ -1.48
SRGAP2-217ENST00000624873 ZFHX3Q15911 3703 aa5.81□□□□□ -1.48
SRGAP2-217ENST00000624873 DMDP11532 3685 aa5.8□□□□□ -1.48
SRGAP2-217ENST00000624873 WDFY3Q8IZQ1 3526 aa5.8□□□□□ -1.48
SRGAP2-217ENST00000624873 TGP01266 2768 aa5.79□□□□□ -1.48
SRGAP2-217ENST00000624873 VWFP04275 2813 aa5.79□□□□□ -1.48
SRGAP2-217ENST00000624873 SPINT4Q6UDR6 99 aa5.79□□□□□ -1.48
SRGAP2-217ENST00000624873 ASPMQ8IZT6 3477 aa5.78□□□□□ -1.48
SRGAP2-217ENST00000624873 A0A0D9SG42 100 aa5.77□□□□□ -1.49
SRGAP2-217ENST00000624873 Q75L30 129 aa5.77□□□□□ -1.49
SRGAP2-217ENST00000624873 KRTAP29-1A8MX34 341 aaPredicted RBP5.74□□□□□ -1.49
SRGAP2-217ENST00000624873 CAMK2N1Q7Z7J9 78 aa5.74□□□□□ -1.49
SRGAP2-217ENST00000624873 A0A1B0GVY2 172 aa5.73□□□□□ -1.49
SRGAP2-217ENST00000624873 RPL37P61927 97 aaKnown RBP5.73□□□□□ -1.49
SRGAP2-217ENST00000624873 NOTCH2NLQ7Z3S9 236 aa5.73□□□□□ -1.49
SRGAP2-217ENST00000624873 KRTAP1-4P0C5Y4 121 aa5.73□□□□□ -1.49
SRGAP2-217ENST00000624873 A0A1B0GU33 70 aa5.73□□□□□ -1.49
SRGAP2-217ENST00000624873 R4GN34 69 aa5.72□□□□□ -1.49
SRGAP2-217ENST00000624873 SMG1Q96Q15 3661 aaKnown RBP5.7□□□□□ -1.5
SRGAP2-217ENST00000624873 CRIPTQ9P021 101 aa5.7□□□□□ -1.5
SRGAP2-217ENST00000624873 H1FX-AS1Q4G0G2 97 aa5.67□□□□□ -1.5
SRGAP2-217ENST00000624873 DMAC1Q96GE9 116 aa5.66□□□□□ -1.5
SRGAP2-217ENST00000624873 CDC42SE1Q9NRR8 79 aa5.66□□□□□ -1.5
SRGAP2-217ENST00000624873 Q1T7F1 81 aa5.66□□□□□ -1.5
SRGAP2-217ENST00000624873 ZFHX4Q86UP3 3567 aa5.62□□□□□ -1.51
SRGAP2-217ENST00000624873 A8MUU9 505 aa5.62□□□□□ -1.51
SRGAP2-217ENST00000624873 TPRXLQ17RH7 258 aa5.6□□□□□ -1.51
SRGAP2-217ENST00000624873 C20orf166-AS1Q96NR2 134 aa5.6□□□□□ -1.51
SRGAP2-217ENST00000624873 LINC01558Q9Y6Z2 57 aa5.6□□□□□ -1.51
SRGAP2-217ENST00000624873 ANK3Q12955 4377 aaKnown RBP5.59□□□□□ -1.51
SRGAP2-217ENST00000624873 M0QZ58 72 aa5.59□□□□□ -1.51
SRGAP2-217ENST00000624873 CYSTM1Q9H1C7 97 aa5.58□□□□□ -1.52
SRGAP2-217ENST00000624873 XP32Q5T750 250 aa5.57□□□□□ -1.52
SRGAP2-217ENST00000624873 FBN3Q75N90 2809 aa5.56□□□□□ -1.52
SRGAP2-217ENST00000624873 KRTAP10-8P60410 259 aa5.55□□□□□ -1.52
SRGAP2-217ENST00000624873 ADM2Q7Z4H4 148 aa5.55□□□□□ -1.52
SRGAP2-217ENST00000624873 PLAC4Q8WY50 150 aa5.55□□□□□ -1.52
SRGAP2-217ENST00000624873 CSMD1Q96PZ7 3565 aa5.53□□□□□ -1.52
SRGAP2-217ENST00000624873 SRRM2Q9UQ35 2752 aaKnown RBP5.53□□□□□ -1.52
SRGAP2-217ENST00000624873 PRAC1Q96KF2 57 aa5.52□□□□□ -1.53
SRGAP2-217ENST00000624873 CSMD2Q7Z408 3487 aa5.51□□□□□ -1.53
SRGAP2-217ENST00000624873 KRTAP13-3Q3SY46 172 aa5.48□□□□□ -1.53
SRGAP2-217ENST00000624873 Q5VV11 94 aa5.46□□□□□ -1.54
SRGAP2-217ENST00000624873 SPENQ96T58 3664 aaKnown RBP5.45□□□□□ -1.54
SRGAP2-217ENST00000624873 TRRAPQ9Y4A5 3859 aa5.41□□□□□ -1.54
SRGAP2-217ENST00000624873 BSNQ9UPA5 3926 aa5.4□□□□□ -1.54
SRGAP2-217ENST00000624873 COL7A1Q02388 2944 aa5.38□□□□□ -1.55
SRGAP2-217ENST00000624873 SPATA8Q6RVD6 105 aa5.36□□□□□ -1.55
SRGAP2-217ENST00000624873 LUZP6Q538Z0 58 aa5.36□□□□□ -1.55
SRGAP2-217ENST00000624873 KRTAP16-1A8MUX0 517 aa5.35□□□□□ -1.55
SRGAP2-217ENST00000624873 MEGF8Q7Z7M0 2845 aa5.34□□□□□ -1.56
SRGAP2-217ENST00000624873 A0A0A0MQY5 61 aa5.31□□□□□ -1.56
SRGAP2-217ENST00000624873 SVEP1Q4LDE5 3571 aa5.29□□□□□ -1.56
SRGAP2-217ENST00000624873 ROMO1P60602 79 aa5.28□□□□□ -1.56
SRGAP2-217ENST00000624873 KRTAP10-10P60014 251 aa5.26□□□□□ -1.57
SRGAP2-217ENST00000624873 MT1HL1P0DM35 61 aa5.2□□□□□ -1.58
SRGAP2-217ENST00000624873 A8MU10 97 aa5.19□□□□□ -1.58
SRGAP2-217ENST00000624873 A6NN06 94 aa5.17□□□□□ -1.58
SRGAP2-217ENST00000624873 HUWE1Q7Z6Z7 4374 aaKnown RBP5.15□□□□□ -1.58
SRGAP2-217ENST00000624873 CUBNO60494 3623 aa5.15□□□□□ -1.59
SRGAP2-217ENST00000624873 KRTAP4-5Q9BYR2 181 aa5.15□□□□□ -1.59
SRGAP2-217ENST00000624873 TNP1P09430 55 aa5.14□□□□□ -1.59
SRGAP2-217ENST00000624873 KRTAP10-4P60372 401 aaPredicted RBP5.12□□□□□ -1.59
SRGAP2-217ENST00000624873 PRO2289Q9P1D8 64 aa5.09□□□□□ -1.59
SRGAP2-217ENST00000624873 DNHD1Q96M86 4753 aa5.09□□□□□ -1.59
SRGAP2-217ENST00000624873 NDUFAF8A1L188 74 aa5.09□□□□□ -1.59
SRGAP2-217ENST00000624873 AKAP9Q99996 3911 aa5.07□□□□□ -1.6
SRGAP2-217ENST00000624873 ZNF469Q96JG9 3925 aaPredicted RBP5.07□□□□□ -1.6
SRGAP2-217ENST00000624873 DNAH9Q9NYC9 4486 aa5.04□□□□□ -1.6
SRGAP2-217ENST00000624873 KRTAP25-1Q3LHN0 102 aa5.03□□□□□ -1.6
SRGAP2-217ENST00000624873 ALMS1Q8TCU4 4167 aa5.03□□□□□ -1.6
SRGAP2-217ENST00000624873 P0C880 135 aa5.01□□□□□ -1.61
SRGAP2-217ENST00000624873 VPS13CQ709C8 3753 aa4.98□□□□□ -1.61
SRGAP2-217ENST00000624873 H0YAA0 97 aa4.93□□□□□ -1.62
SRGAP2-217ENST00000624873 PP632Q6XCG6 107 aa4.92□□□□□ -1.62
SRGAP2-217ENST00000624873 KRTAP3-1Q9BYR8 98 aa4.88□□□□□ -1.63
SRGAP2-217ENST00000624873 DNAH5Q8TE73 4624 aa4.87□□□□□ -1.63
SRGAP2-217ENST00000624873 DNAH11Q96DT5 4516 aa4.84□□□□□ -1.63
SRGAP2-217ENST00000624873 DNAH1Q9P2D7 4330 aa4.83□□□□□ -1.64
SRGAP2-217ENST00000624873 PLECQ15149 4684 aaKnown RBP4.83□□□□□ -1.64
SRGAP2-217ENST00000624873 DNAH10Q8IVF4 4471 aa4.76□□□□□ -1.65
SRGAP2-217ENST00000624873 VPS13DQ5THJ4 4388 aa4.75□□□□□ -1.65
SRGAP2-217ENST00000624873 PRKDCP78527 4128 aaKnown RBP4.73□□□□□ -1.65
SRGAP2-217ENST00000624873 DYNC1H1Q14204 4646 aaKnown RBP4.71□□□□□ -1.66
SRGAP2-217ENST00000624873 C10orf95Q9H7T3 257 aa4.71□□□□□ -1.66
SRGAP2-217ENST00000624873 ANK2Q01484 3957 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms